BLASTX nr result

ID: Lithospermum22_contig00002166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002166
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...   184   2e-44
dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]     180   6e-43
ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arab...   174   3e-41
ref|NP_974413.1| high mobility group protein B1 [Arabidopsis tha...   171   2e-40
ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis ...   171   2e-40

>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  184 bits (468), Expect = 2e-44
 Identities = 96/152 (63%), Positives = 115/152 (75%), Gaps = 2/152 (1%)
 Frame = +3

Query: 231 MKTAKGKGVLKRDTKEVLKPVDDRKLGKRKAP--SAKASXXXXXXXXXXXXXXXXXXXXX 404
           MK AKGKG  +RDTKE LKP +DRK+GKRKA   + K+S                     
Sbjct: 1   MKAAKGKGAARRDTKEALKPAEDRKIGKRKAAVKAEKSSKRATTKDKKAKKDPNKPKRPP 60

Query: 405 SAFFVFLEDFRKTFKKENPNVKAVSAVGKAGGQKWKSMSEDEKAPYEAKAAKRKADYEKL 584
           SAFFVFLE+FRK FKKENPNVKAVSAVGKAGG++WKS+SE EKAPYEAKAAK+KA+YEK+
Sbjct: 61  SAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKI 120

Query: 585 MNAYNNKQESSADEGGNESEKSQSEAEVHDQN 680
           MNAYN KQES+AD+G  ES++S+S  EV+DQ+
Sbjct: 121 MNAYNKKQESTADDGDEESDRSKS--EVNDQD 150


>dbj|BAJ33790.1| unnamed protein product [Thellungiella halophila]
          Length = 185

 Score =  180 bits (456), Expect = 6e-43
 Identities = 98/149 (65%), Positives = 109/149 (73%)
 Frame = +3

Query: 231 MKTAKGKGVLKRDTKEVLKPVDDRKLGKRKAPSAKASXXXXXXXXXXXXXXXXXXXXXSA 410
           MKTAKGK  +K  TKE LKPVDDRK+GKRKAP+AKA+                     SA
Sbjct: 1   MKTAKGKDKVKT-TKETLKPVDDRKVGKRKAPAAKATKRETRKEKRAKKDPNKPKRAPSA 59

Query: 411 FFVFLEDFRKTFKKENPNVKAVSAVGKAGGQKWKSMSEDEKAPYEAKAAKRKADYEKLMN 590
           FFVFLEDFR+TFKKENPNVKAVSAVGKAGGQKWKSMS+ EKAPYE KAAKRKA+YEKLM+
Sbjct: 60  FFVFLEDFRQTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMD 119

Query: 591 AYNNKQESSADEGGNESEKSQSEAEVHDQ 677
           AYN   E    EG +ESEKS+SE    D+
Sbjct: 120 AYNKNME----EGSDESEKSRSEVNDEDE 144


>ref|XP_002877829.1| hypothetical protein ARALYDRAFT_323737 [Arabidopsis lyrata subsp.
           lyrata] gi|297323667|gb|EFH54088.1| hypothetical protein
           ARALYDRAFT_323737 [Arabidopsis lyrata subsp. lyrata]
          Length = 185

 Score =  174 bits (442), Expect = 3e-41
 Identities = 96/149 (64%), Positives = 106/149 (71%)
 Frame = +3

Query: 231 MKTAKGKGVLKRDTKEVLKPVDDRKLGKRKAPSAKASXXXXXXXXXXXXXXXXXXXXXSA 410
           MKTAKGK  +K  TKE LKPVDDRK+GKRKAP+ KA+                     SA
Sbjct: 1   MKTAKGKDKVKT-TKEALKPVDDRKVGKRKAPAEKATKRETRKEKKAKKDPNKPKRAPSA 59

Query: 411 FFVFLEDFRKTFKKENPNVKAVSAVGKAGGQKWKSMSEDEKAPYEAKAAKRKADYEKLMN 590
           FFVFLEDFR TFKKENPNVKAVSAVGKAGGQKWKSMS+ EKAPYE KAAKRKA+YEK M+
Sbjct: 60  FFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMD 119

Query: 591 AYNNKQESSADEGGNESEKSQSEAEVHDQ 677
           AYN   E    EG +ESEKS+SE    D+
Sbjct: 120 AYNKNME----EGSDESEKSRSEVNDEDE 144


>ref|NP_974413.1| high mobility group protein B1 [Arabidopsis thaliana]
           gi|222423104|dbj|BAH19531.1| AT3G51880 [Arabidopsis
           thaliana] gi|332645335|gb|AEE78856.1| high mobility
           group protein B1 [Arabidopsis thaliana]
          Length = 185

 Score =  171 bits (434), Expect = 2e-40
 Identities = 95/149 (63%), Positives = 105/149 (70%)
 Frame = +3

Query: 231 MKTAKGKGVLKRDTKEVLKPVDDRKLGKRKAPSAKASXXXXXXXXXXXXXXXXXXXXXSA 410
           MKTAKGK  +K  TKE LKPVDDRK+GKRKAP+ K +                     SA
Sbjct: 1   MKTAKGKDKVKT-TKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSA 59

Query: 411 FFVFLEDFRKTFKKENPNVKAVSAVGKAGGQKWKSMSEDEKAPYEAKAAKRKADYEKLMN 590
           FFVFLEDFR TFKKENPNVKAVSAVGKAGGQKWKSMS+ EKAPYE KAAKRKA+YEK M+
Sbjct: 60  FFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMD 119

Query: 591 AYNNKQESSADEGGNESEKSQSEAEVHDQ 677
           AYN   E    EG +ESEKS+SE    D+
Sbjct: 120 AYNKNLE----EGSDESEKSRSEINDEDE 144


>ref|NP_001190062.1| high mobility group protein B1 [Arabidopsis thaliana]
           gi|332645337|gb|AEE78858.1| high mobility group protein
           B1 [Arabidopsis thaliana]
          Length = 161

 Score =  171 bits (434), Expect = 2e-40
 Identities = 95/149 (63%), Positives = 105/149 (70%)
 Frame = +3

Query: 231 MKTAKGKGVLKRDTKEVLKPVDDRKLGKRKAPSAKASXXXXXXXXXXXXXXXXXXXXXSA 410
           MKTAKGK  +K  TKE LKPVDDRK+GKRKAP+ K +                     SA
Sbjct: 1   MKTAKGKDKVKT-TKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSA 59

Query: 411 FFVFLEDFRKTFKKENPNVKAVSAVGKAGGQKWKSMSEDEKAPYEAKAAKRKADYEKLMN 590
           FFVFLEDFR TFKKENPNVKAVSAVGKAGGQKWKSMS+ EKAPYE KAAKRKA+YEK M+
Sbjct: 60  FFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMD 119

Query: 591 AYNNKQESSADEGGNESEKSQSEAEVHDQ 677
           AYN   E    EG +ESEKS+SE    D+
Sbjct: 120 AYNKNLE----EGSDESEKSRSEINDEDE 144


Top