BLASTX nr result
ID: Lithospermum22_contig00002100
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00002100
(1723 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 191 5e-46
emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera] 187 7e-45
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 186 2e-44
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 181 5e-43
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 145 2e-42
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 191 bits (485), Expect = 5e-46
Identities = 106/280 (37%), Positives = 162/280 (57%), Gaps = 7/280 (2%)
Frame = +3
Query: 108 SSDNPGNIISTVTFTGHNYDEWSKSLRLALM-ARRKFGFVDNTIVKSLEAVYFVDWKSVQ 284
+ D PG+ I+ G NYD+W+ ++LAL +RRKF F++ TI DW +V
Sbjct: 25 TGDRPGDFITPTRLRGDNYDDWASDIQLALAGSRRKFEFLEGTITGPQPPYTQSDWNTVN 84
Query: 285 AMIMQ*ILNTIDPSLRKTISYFEEAKPL*DVLQRRFDVGNGPRNQQLKAALVACCQSKTM 464
AM++ I NTIDP ++ T+S F +AK L + L++R+ + NGPR QQLK ++ C QSK+M
Sbjct: 85 AMLVSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQSKSM 144
Query: 465 SVADYFGKLQPLWDELATYNPVSVCNCGGYSIGLGEQFQRQVNEERLHNFLLGINDELFG 644
SV Y+GKL LW+EL + P+ C C S Q + + +LH+FL+G+N +L+
Sbjct: 145 SVTTYYGKLNVLWEELFKHEPLISCTCCS-SCTAASLHQARREQGKLHDFLMGLNTDLYA 203
Query: 645 HLHSSLLAQDPPPLLDHAYQTILQEEQV-LSNTKTRTDKDDIMAMDV*VPIQGINSLDSR 821
L +++L+QDP P LD AYQ ++Q+++V L+ T +++ V + R
Sbjct: 204 QLRTNILSQDPLPSLDRAYQLVIQDKRVRLAKAVTEDKPAEVLGFAV-----RTGAGRGR 258
Query: 822 FRTDSP-CSYCHKSGHDVSTCNAKNGYPEWR----PECHK 926
+T+ P CS+C K+GH+ STC W P CHK
Sbjct: 259 GKTERPVCSHCKKTGHETSTC--------WSLVACPHCHK 290
Score = 131 bits (329), Expect = 6e-28
Identities = 71/148 (47%), Positives = 97/148 (65%), Gaps = 3/148 (2%)
Frame = +2
Query: 1187 DHLSGEFSNTSWIIDTRASTHVTGNFSLLIDVRNMIECLIGLLDGLKAKSSQFGSVQLSS 1366
D L+G+F SWIIDT A+ HVTG+ S L D + ECL+GL +G ++Q GSV+LS+
Sbjct: 374 DRLNGKFDTKSWIIDTGATHHVTGDLSWLFDTIALFECLVGLPNGESVVATQSGSVRLSN 433
Query: 1367 TLLLHNVIFVPYLRCNLLFVSQLAANLNSVVKFANDVCVIPDQCSRTLIGVGERRDGLYY 1546
+ L NV++V L CNLL VSQL +L+ +V+F + +C I D +R LIG G RRDGLYY
Sbjct: 434 NITLKNVLYVSKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDH-TRELIGTGVRRDGLYY 492
Query: 1547 F--CSTPEFQILNVHGTESS-ELWHRRL 1621
F Q ++VH S+ ELWH+R+
Sbjct: 493 FGGAEGDSVQHVSVHNAASTLELWHKRM 520
>emb|CAN74847.1| hypothetical protein VITISV_028741 [Vitis vinifera]
Length = 1262
Score = 187 bits (475), Expect = 7e-45
Identities = 104/275 (37%), Positives = 158/275 (57%), Gaps = 2/275 (0%)
Frame = +3
Query: 108 SSDNPGNIISTVTFTGHNYDEWSKSLRLALMARRKFGFVDNTIVKSLEAVYFVDWKSVQA 287
+ D PG+ I+ G NY++W+ ++LAL ARRKF F++ TI DW +V A
Sbjct: 25 TGDRPGDFITPTRLHGDNYNDWASDIQLALEARRKFEFLEGTITGPQPPYTQSDWNTVNA 84
Query: 288 MIMQ*ILNTIDPSLRKTISYFEEAKPL*DVLQRRFDVGNGPRNQQLKAALVACCQSKTMS 467
M+ I NTIDP ++ T+S F +AK L + L++R+ + NGPR QQLK ++ C Q K+MS
Sbjct: 85 MLGSWITNTIDPEVKSTLSKFRDAKRLWEHLKQRYAMVNGPRIQQLKTSIAKCEQPKSMS 144
Query: 468 VADYFGKLQPLWDELATYNPVSVCNCGGYSIGLGEQFQRQVNEERLHNFLLGINDELFGH 647
V Y+GKL LW+EL P+ C C S Q + + +LH+FL+G+N +L+
Sbjct: 145 VTTYYGKLNVLWEELFKNEPLISCTCCS-SCTAASLHQARREQGKLHDFLMGLNTDLYAQ 203
Query: 648 LHSSLLAQDPPPLLDHAYQTILQEEQV-LSNTKTRTDKDDIMAMDV*VPIQGINSLDSRF 824
L +++L+QDP P LD AYQ ++Q+E+V L+ T +++ V + R
Sbjct: 204 LRTNILSQDPLPSLDRAYQLVIQDERVRLAKAVTEDKPAEVLGFXV-----RTGAGRGRG 258
Query: 825 RTDSP-CSYCHKSGHDVSTCNAKNGYPEWRPECHK 926
+T+ P CS+ K+GH+ STC + P CHK
Sbjct: 259 KTERPVCSHXKKTGHETSTCWSXVAC----PHCHK 289
Score = 128 bits (321), Expect = 5e-27
Identities = 69/148 (46%), Positives = 96/148 (64%), Gaps = 3/148 (2%)
Frame = +2
Query: 1187 DHLSGEFSNTSWIIDTRASTHVTGNFSLLIDVRNMIECLIGLLDGLKAKSSQFGSVQLSS 1366
D L+G+F SWIIDT A+ HVTG+ L D + EC +GL +G ++Q GSV+LS+
Sbjct: 373 DRLNGKFDTKSWIIDTGATHHVTGDLXWLFDTIALFECPVGLPNGESIVATQSGSVRLSN 432
Query: 1367 TLLLHNVIFVPYLRCNLLFVSQLAANLNSVVKFANDVCVIPDQCSRTLIGVGERRDGLYY 1546
+ L NV++VP L CNLL VSQL +L+ +V+F + +C I D +R LIG G RRDGLYY
Sbjct: 433 NITLKNVLYVPKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDH-TRELIGTGVRRDGLYY 491
Query: 1547 F--CSTPEFQILNVHGTESS-ELWHRRL 1621
F + ++VH S+ ELWH+R+
Sbjct: 492 FGGAEGDSVEHVSVHNAASTLELWHKRM 519
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 186 bits (472), Expect = 2e-44
Identities = 102/281 (36%), Positives = 162/281 (57%), Gaps = 11/281 (3%)
Frame = +3
Query: 108 SSDNPGNIISTVTFTGHNYDEWSKSLRLALMARRKFGFVDNTIVKS-LEAVYFVDWKSVQ 284
SSDNPG +IS+V TG NY+EWS + AL A+RK GF++ +I K L+ + +W++V
Sbjct: 31 SSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFINGSISKPPLDNPDYENWQAVN 90
Query: 285 AMIMQ*ILNTIDPSLRKTISYFEEAKPL*DVLQRRFDVGNGPRNQQLKAALVACCQSKTM 464
+MI+ I +I+P ++ T+++ +A L L++RF VGN R Q+KA L AC Q
Sbjct: 91 SMIVGWIRASIEPKVKSTVTFISDAHQLWSELKQRFSVGNKVRVHQIKAQLAACRQDG-Q 149
Query: 465 SVADYFGKLQPLWDELATYNPVSVCNCGGYSIGLGEQFQRQVNEERLHNFLLGINDELFG 644
V DY+G+L LW+E Y P++VC CG + G + ++ EE++H F+LG++D FG
Sbjct: 150 PVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFG 209
Query: 645 HLHSSLLAQDPPPLLDHAYQTILQEEQVLSNTKTRTDKDDIMAMDV*VPIQGINSLDSRF 824
L ++L+A DP P L Y +++EEQ L++ + R + + + + + +
Sbjct: 210 GLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGF-----LTRQSEVTADG 264
Query: 825 RTDSP----------CSYCHKSGHDVSTCNAKNGYPEWRPE 917
RTDS CS+C +SGH+ C G+P+W E
Sbjct: 265 RTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTE 305
Score = 115 bits (287), Expect = 5e-23
Identities = 58/146 (39%), Positives = 84/146 (57%)
Frame = +2
Query: 1184 TDHLSGEFSNTSWIIDTRASTHVTGNFSLLIDVRNMIECLIGLLDGLKAKSSQFGSVQLS 1363
+D LSG+ I+DT AS H+TG SLL ++ + C +G D K + G+ +LS
Sbjct: 372 SDKLSGKMKLGDVILDTGASHHMTGQLSLLTNIVTIPSCSVGFADDRKTFAISMGTFKLS 431
Query: 1364 STLLLHNVIFVPYLRCNLLFVSQLAANLNSVVKFANDVCVIPDQCSRTLIGVGERRDGLY 1543
T+ L NV++VP L C+L+ VS+L + + F + +CV+ D+ SRTLIG GE RDG+Y
Sbjct: 432 ETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVY 491
Query: 1544 YFCSTPEFQILNVHGTESSELWHRRL 1621
Y + V T LWH+RL
Sbjct: 492 YLTDAATTTVHKVDVTTDHALWHQRL 517
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 181 bits (459), Expect = 5e-43
Identities = 100/281 (35%), Positives = 160/281 (56%), Gaps = 11/281 (3%)
Frame = +3
Query: 108 SSDNPGNIISTVTFTGHNYDEWSKSLRLALMARRKFGFVDNTIVKS-LEAVYFVDWKSVQ 284
SSDNPG +IS+V TG NY+EWS + AL A+RK GF++ +I K L+ + +W++V
Sbjct: 31 SSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKTGFINGSISKPPLDNPDYENWQAVN 90
Query: 285 AMIMQ*ILNTIDPSLRKTISYFEEAKPL*DVLQRRFDVGNGPRNQQLKAALVACCQSKTM 464
+MI+ I +I+P ++ T+++ +A L L++RF VGN Q+K L AC Q
Sbjct: 91 SMIVGWIRASIEPKVKSTVTFICDAHQLWSELKQRFSVGNKVHVHQIKTQLAACRQDG-Q 149
Query: 465 SVADYFGKLQPLWDELATYNPVSVCNCGGYSIGLGEQFQRQVNEERLHNFLLGINDELFG 644
V DY+G+L LW+E Y P++VC CG + G + ++ EE++H F+LG++D FG
Sbjct: 150 PVIDYYGRLCKLWEEFQIYKPITVCKCGLCTCGATLEPSKEREEEKIHQFVLGLDDSRFG 209
Query: 645 HLHSSLLAQDPPPLLDHAYQTILQEEQVLSNTKTRTDKDDIMAMDV*VPIQGINSLDSRF 824
L ++L+A DP P L Y +++EEQ L++ + R + + + + + +
Sbjct: 210 GLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQSAIGF-----LTRQSEVTADG 264
Query: 825 RTDSP----------CSYCHKSGHDVSTCNAKNGYPEWRPE 917
RTDS CS+C +SGH+ C G+P+W E
Sbjct: 265 RTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPDWWTE 305
Score = 117 bits (293), Expect = 9e-24
Identities = 59/146 (40%), Positives = 85/146 (58%)
Frame = +2
Query: 1184 TDHLSGEFSNTSWIIDTRASTHVTGNFSLLIDVRNMIECLIGLLDGLKAKSSQFGSVQLS 1363
+D LSG+ I+DT AS H+TG SLL ++ + C +G DG K + G+ +LS
Sbjct: 372 SDKLSGKMKLGDVILDTGASHHMTGQLSLLTNIVTIPSCSVGFADGRKTFAISMGTFKLS 431
Query: 1364 STLLLHNVIFVPYLRCNLLFVSQLAANLNSVVKFANDVCVIPDQCSRTLIGVGERRDGLY 1543
T+ L NV++VP L C+L+ VS+L + + F + +CV+ D+ SRTLIG GE RDG+Y
Sbjct: 432 ETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERDGVY 491
Query: 1544 YFCSTPEFQILNVHGTESSELWHRRL 1621
Y + V T LWH+RL
Sbjct: 492 YLTDAATTTVHKVDITTDHALWHQRL 517
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 145 bits (367), Expect(2) = 2e-42
Identities = 106/356 (29%), Positives = 169/356 (47%), Gaps = 4/356 (1%)
Frame = +3
Query: 108 SSDNPGNIISTVTFTGHNYDEWSKSLRLALMARRKFGFVDNTIVK-SLEAVYFVDWKSVQ 284
S+DNPGNII+ V AL A++K+GFVD +I + ++ DW ++
Sbjct: 9 SNDNPGNIITQVQLK-------------ALRAKKKYGFVDGSIKQPDNDSPELEDWWTIN 55
Query: 285 AMIMQ*ILNTIDPSLRKTISYFEEAKPL*DVLQRRFDVGNGPRNQQLKAALVACCQSKTM 464
+M++ L +EE K ++F +GNGPR QQLK+ LV C Q +
Sbjct: 56 SMLVSWEL-------------WEEIK-------QQFSIGNGPRVQQLKSYLVNCKQ-EGQ 94
Query: 465 SVADYFGKLQPLWDELATYNPVSVCNCGGYSIGLGEQFQRQVNEERLHNFLLGINDELFG 644
+ Y+GKL+ LWDEL Y+ + VC C + Q +++ EER+H FL+G++++ +G
Sbjct: 95 GIIVYYGKLKSLWDELNNYDSIPVCTCTRCKCKITTQLEKKREEERVHQFLMGLDEDGYG 154
Query: 645 HLHSSLLAQDPPPLLDHAYQTILQEEQVLSNTKTRTDKDDIMAMDV*VPIQGINSLDSRF 824
+ S++L+ +P L+ Y I+Q+E+V + T+T+ ++ M+ V + G N
Sbjct: 155 TVRSNILSIEPLSNLNRVYAMIVQQERVRTMTRTKEERGSPMSFA--VQVGGRNPGGDGK 212
Query: 825 RTDSPCSYCHKSGHDVSTCNAKNGYPEW---RPECHKRHV*NXXXXXXXXXXXXXVTAPR 995
CS C + GH+V +C + YPEW RP T+
Sbjct: 213 DKTVICSNCKRKGHEVDSCFQRIAYPEWWGDRPR--------------------TTTSGC 252
Query: 996 QAGRGAGSTMAAGILGPGGRSAEIRVVMTDGSAMTGGLQPTSSSGEVPVSGMNFTQ 1163
G G G G G +A VV T G+ GG + S +SG++ Q
Sbjct: 253 SGGHGRGVQQGTGGGRGRGGTARANVVQTLGT--DGGRSVVTDSNRTGISGLSDKQ 306
Score = 55.1 bits (131), Expect(2) = 2e-42
Identities = 39/145 (26%), Positives = 58/145 (40%)
Frame = +2
Query: 1187 DHLSGEFSNTSWIIDTRASTHVTGNFSLLIDVRNMIECLIGLLDGLKAKSSQFGSVQLSS 1366
+ L G+ + WIIDT AS H+T + L D+R++I C +GL +G K K+ + +
Sbjct: 323 ERLIGKQNILPWIIDTGASHHMTDTYECLNDLRDIIPCPVGLPNGAKTKALKERT----- 377
Query: 1367 TLLLHNVIFVPYLRCNLLFVSQLAANLNSVVKFANDVCVIPDQCSRTLIGVGERRDGLYY 1546
D SR LIG GE+R+GLY+
Sbjct: 378 -----------------------------------------DHNSRMLIGAGEQREGLYF 396
Query: 1547 FCSTPEFQILNVHGTESSELWHRRL 1621
+ S ELW+RR+
Sbjct: 397 LKGVTPIRAYKTTSIASYELWNRRM 421