BLASTX nr result

ID: Lithospermum22_contig00002076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002076
         (2699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607491.1| AdoMet-dependent rRNA methyltransferase spb1...   172   3e-40
ref|XP_004148837.1| PREDICTED: adoMet-dependent rRNA methyltrans...   163   3e-37
ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [R...   163   3e-37
ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltrans...   162   6e-37
ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltrans...   160   1e-36

>ref|XP_003607491.1| AdoMet-dependent rRNA methyltransferase spb1 [Medicago truncatula]
            gi|355508546|gb|AES89688.1| AdoMet-dependent rRNA
            methyltransferase spb1 [Medicago truncatula]
          Length = 868

 Score =  172 bits (437), Expect = 3e-40
 Identities = 86/117 (73%), Positives = 99/117 (84%)
 Frame = -1

Query: 1670 SSNRLDLCAAPGGRMQVAVERVPVDSLVIGVDLDPIRPIRGAIGMQEDITHPKCKAAVRR 1491
            S + LDLCAAPGG MQVAV+RVPVD LVIGVDL PI+PIRGAI +QEDIT P+CK+ VR+
Sbjct: 45   SRSVLDLCAAPGGWMQVAVQRVPVDHLVIGVDLTPIKPIRGAIAIQEDITRPECKSRVRK 104

Query: 1490 IMGELGVRALDLVLHDGSPNVGGAWAKEATSQNALVIDSGKLAAHLLDRKGTFLTKV 1320
            IM E G RA D++LHDGSPNVGGAWA+EATSQN+LVID+ KLA   L  KGTF+TKV
Sbjct: 105  IMNENGYRAFDVILHDGSPNVGGAWAQEATSQNSLVIDAIKLATQFLAPKGTFVTKV 161


>ref|XP_004148837.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Cucumis
            sativus]
          Length = 854

 Score =  163 bits (412), Expect = 3e-37
 Identities = 79/113 (69%), Positives = 94/113 (83%)
 Frame = -1

Query: 1658 LDLCAAPGGRMQVAVERVPVDSLVIGVDLDPIRPIRGAIGMQEDITHPKCKAAVRRIMGE 1479
            LDLCAAPGG MQVAVERVPV SLV+GVDL PI P+RGA+  ++DIT P+CKA +++IM E
Sbjct: 47   LDLCAAPGGWMQVAVERVPVGSLVVGVDLVPIAPVRGAVAFEQDITKPECKARLKKIMSE 106

Query: 1478 LGVRALDLVLHDGSPNVGGAWAKEATSQNALVIDSGKLAAHLLDRKGTFLTKV 1320
             G  A DL+LHDGSPNVGGAWA+EA +QN+LVIDS +LA  LL  KGTF+TKV
Sbjct: 107  KGCAAFDLILHDGSPNVGGAWAQEAMAQNSLVIDSVRLATQLLAPKGTFVTKV 159


>ref|XP_002512920.1| ribosomal RNA methyltransferase, putative [Ricinus communis]
            gi|223547931|gb|EEF49423.1| ribosomal RNA
            methyltransferase, putative [Ricinus communis]
          Length = 828

 Score =  163 bits (412), Expect = 3e-37
 Identities = 80/113 (70%), Positives = 95/113 (84%)
 Frame = -1

Query: 1658 LDLCAAPGGRMQVAVERVPVDSLVIGVDLDPIRPIRGAIGMQEDITHPKCKAAVRRIMGE 1479
            LDLCAAPGG MQVAV+RVPV SLV+G+DL  I PIRGA  +++DIT P+CKA V++IMGE
Sbjct: 47   LDLCAAPGGWMQVAVQRVPVGSLVLGIDLVKIAPIRGATSIEQDITKPECKARVKKIMGE 106

Query: 1478 LGVRALDLVLHDGSPNVGGAWAKEATSQNALVIDSGKLAAHLLDRKGTFLTKV 1320
             GV+A DLVLHDGSPN+GGAWA+EA SQNALVID+ +LA   L  KGTF+TKV
Sbjct: 107  HGVKAFDLVLHDGSPNIGGAWAQEAMSQNALVIDAVRLATQFLAPKGTFVTKV 159


>ref|XP_003540678.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Glycine
            max]
          Length = 834

 Score =  162 bits (409), Expect = 6e-37
 Identities = 77/113 (68%), Positives = 93/113 (82%)
 Frame = -1

Query: 1658 LDLCAAPGGRMQVAVERVPVDSLVIGVDLDPIRPIRGAIGMQEDITHPKCKAAVRRIMGE 1479
            LDLCAAPGG MQV V+RVPVD LVIGVDL PI P+RGAI +QEDIT P+CK+ ++++M +
Sbjct: 47   LDLCAAPGGWMQVVVQRVPVDHLVIGVDLAPIAPVRGAIAIQEDITRPECKSRIKKLMND 106

Query: 1478 LGVRALDLVLHDGSPNVGGAWAKEATSQNALVIDSGKLAAHLLDRKGTFLTKV 1320
             G RA D++LHDGSPNVGGAWA+EA SQNALVID+ KLA   L  KG F+TK+
Sbjct: 107  HGCRAFDVILHDGSPNVGGAWAQEAMSQNALVIDAVKLATQFLAPKGKFVTKI 159


>ref|XP_003537870.1| PREDICTED: adoMet-dependent rRNA methyltransferase spb1-like [Glycine
            max]
          Length = 829

 Score =  160 bits (406), Expect = 1e-36
 Identities = 76/113 (67%), Positives = 94/113 (83%)
 Frame = -1

Query: 1658 LDLCAAPGGRMQVAVERVPVDSLVIGVDLDPIRPIRGAIGMQEDITHPKCKAAVRRIMGE 1479
            LDLCAAPGG MQVAV+ +PV+ LVIGVDL PI P+RGAI +QEDIT P+CK+ ++++M +
Sbjct: 47   LDLCAAPGGWMQVAVKSMPVNHLVIGVDLSPIAPVRGAIAIQEDITRPECKSRIKKLMND 106

Query: 1478 LGVRALDLVLHDGSPNVGGAWAKEATSQNALVIDSGKLAAHLLDRKGTFLTKV 1320
             G RA D++LHDGSPNVGGAWA+EATSQNALVID+ KLA   L  KG F+TK+
Sbjct: 107  HGCRAFDVILHDGSPNVGGAWAQEATSQNALVIDAVKLATQFLAPKGIFVTKI 159


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