BLASTX nr result

ID: Lithospermum22_contig00002066 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002066
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|1...    82   3e-14
ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]       82   6e-14
gb|ABK95155.1| unknown [Populus trichocarpa]                           82   6e-14
ref|XP_003518735.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    81   1e-13

>ref|XP_002316133.1| predicted protein [Populus trichocarpa] gi|118483434|gb|ABK93617.1|
           unknown [Populus trichocarpa]
           gi|222865173|gb|EEF02304.1| predicted protein [Populus
           trichocarpa]
          Length = 218

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 18/122 (14%)
 Frame = +3

Query: 123 YIIGLISTSPPQH---------SISPLEVLVLVNFQTGSITMVEGSGS--------GGKE 251
           +I+G  ST+  +          +  P E ++L+N  T  + ++EG+ S        G K+
Sbjct: 30  FILGFTSTNTTEQRDPDQEAPQTTDPNERIILINPFTQGMVVIEGAASLESLLRDIGNKK 89

Query: 252 GPLPASKASIEAMRKXXXXXXXXXXXCPICLVEFG-EEVVREMPCMHKYHGRCIEKWLGI 428
           G  PASKASIEAM K           C ICL E+    VV+EMPC H++HG C+EKWL I
Sbjct: 90  GQPPASKASIEAMPKVEIGEDNKDGECAICLEEWELGGVVKEMPCKHRFHGGCVEKWLKI 149

Query: 429 HG 434
           HG
Sbjct: 150 HG 151


>ref|XP_002311305.1| predicted protein [Populus trichocarpa] gi|222851125|gb|EEE88672.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 17/121 (14%)
 Frame = +3

Query: 123 YIIGLISTSPPQH--------SISPLEVLVLVNFQTGSITMVEGSGS--------GGKEG 254
           +I G  ST+  +         +  P E ++L+N  T  + ++EG+ S        G K G
Sbjct: 30  FIFGFTSTNSTEERDPDQEPQTTDPNERIILINPLTQGMVVIEGAASLESLLRDIGNKNG 89

Query: 255 PLPASKASIEAMRKXXXXXXXXXXXCPICLVEFGE-EVVREMPCMHKYHGRCIEKWLGIH 431
             PASKASIEAM             C ICL E+    VV+EMPC H++HG C+EKWL IH
Sbjct: 90  QPPASKASIEAMPSVEIGEDNKDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIH 149

Query: 432 G 434
           G
Sbjct: 150 G 150


>gb|ABK96350.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 225

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 17/121 (14%)
 Frame = +3

Query: 123 YIIGLISTSPPQH--------SISPLEVLVLVNFQTGSITMVEGSGS--------GGKEG 254
           +I G  ST+  +         +  P E ++L+N  T  + ++EG+ S        G K G
Sbjct: 30  FIFGFTSTNSTEERDPDQEPQTTDPNERIILINPLTQGMVVIEGAASLESLLRDMGNKNG 89

Query: 255 PLPASKASIEAMRKXXXXXXXXXXXCPICLVEFGE-EVVREMPCMHKYHGRCIEKWLGIH 431
             PASKASIEAM             C ICL E+    VV+EMPC H++HG C+EKWL IH
Sbjct: 90  QPPASKASIEAMPSVEIGEDNKDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIH 149

Query: 432 G 434
           G
Sbjct: 150 G 150


>gb|ABK95155.1| unknown [Populus trichocarpa]
          Length = 212

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 17/121 (14%)
 Frame = +3

Query: 123 YIIGLISTSPPQH--------SISPLEVLVLVNFQTGSITMVEGSGS--------GGKEG 254
           +I G  ST+  +         +  P E ++L+N  T  + ++EG+ S        G K G
Sbjct: 17  FIFGFTSTNSTEERDPDQEPQTTDPNERIILINPLTQGMVVIEGAASLESLLRDIGNKNG 76

Query: 255 PLPASKASIEAMRKXXXXXXXXXXXCPICLVEFGE-EVVREMPCMHKYHGRCIEKWLGIH 431
             PASKASIEAM             C ICL E+    VV+EMPC H++HG C+EKWL IH
Sbjct: 77  QPPASKASIEAMPSVEIGEDNKDGECAICLEEWEPGAVVKEMPCKHRFHGNCVEKWLKIH 136

Query: 432 G 434
           G
Sbjct: 137 G 137


>ref|XP_003518735.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 231

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 15/113 (13%)
 Frame = +3

Query: 141 STSPPQHSISPLEV-----LVLVNFQTGSITMVEGSGS---------GGKEGPLPASKAS 278
           ++  P H  +P E      ++LVN  T  + +++G  S          GK G  PASK S
Sbjct: 42  NSDDPDHETAPTEAPQRQRIILVNPLTQGMVVIDGGSSLEALFREFTNGKGGRPPASKES 101

Query: 279 IEAMRKXXXXXXXXXXXCPICLVEFGEE-VVREMPCMHKYHGRCIEKWLGIHG 434
           IEA+             C +CL EFG   V +EMPC H++HG CIEKWLG+HG
Sbjct: 102 IEALPSVEIGEGNEDSECVVCLEEFGVGGVAKEMPCKHRFHGNCIEKWLGMHG 154


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