BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002062
         (1517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619878.1| Dihydropyrimidine dehydrogenase [Medicago tr...   689   0.0  
ref|NP_001234738.1| PYD1A protein [Solanum lycopersicum] gi|2485...   689   0.0  
gb|ACJ84544.1| unknown [Medicago truncatula]                          687   0.0  
ref|XP_002283095.1| PREDICTED: NAD-dependent dihydropyrimidine d...   684   0.0  
emb|CAN75682.1| hypothetical protein VITISV_038955 [Vitis vinifera]   684   0.0  

>ref|XP_003619878.1| Dihydropyrimidine dehydrogenase [Medicago truncatula]
            gi|355494893|gb|AES76096.1| Dihydropyrimidine
            dehydrogenase [Medicago truncatula]
          Length = 424

 Score =  689 bits (1778), Expect = 0.0
 Identities = 352/435 (80%), Positives = 377/435 (86%), Gaps = 4/435 (0%)
 Frame = +3

Query: 36   MASLS----STLNLKPKLSFKNSISELPQSFKVDHVIFVNXXXXXXXXXXXXXXDEPDLT 203
            MA+LS     T N   + SF  S    P+  +VD  +F +               EPDL+
Sbjct: 1    MANLSMTQLKTRNSASRFSFNFSKKVYPRPSRVDFKVFASEGQV----------SEPDLS 50

Query: 204  VSVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLR 383
            V VNGL MPNPFVIGSGPPGTNYTVMKRAFDEGWG VIAKTVSLDAAKVINVTPRYARLR
Sbjct: 51   VKVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRYARLR 110

Query: 384  VAGTNGSARGQIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKDAWEE 563
             A  NGSA+G+IIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNK AWEE
Sbjct: 111  -ANANGSAKGEIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEE 169

Query: 564  LIGRVEETGVDAMEINFSCPHGMPERKMGAAVGQDCDLLGEVCGWINGVATVPVWAKMTP 743
            LI RVE+TG+DA+EINFSCPHGMPERKMGAAVGQDC LL EVCGWIN  ATVPVWAKMTP
Sbjct: 170  LIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTP 229

Query: 744  NITDITQPSRVALASGCEGVAAINTIMSVMGINLDTLHPEPCVEGYSTPGGYSAKAVHPI 923
            NITDI+QP+RVAL+SGCEGVAAINTIMSVMGINL+TL PEPCVEGYSTPGGYSAKAVHPI
Sbjct: 230  NITDISQPARVALSSGCEGVAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPI 289

Query: 924  ALGKVMNIAKMMHSEFANMDRSLSAIGGVETGADAAEFILLGADTVQVCTGVMMHGYGLV 1103
            ALGKVM+IAKMM SEF + + SLSAIGGVETG DAAEFILLGA+TVQVCTGVMMHGYGLV
Sbjct: 290  ALGKVMSIAKMMKSEFDSENYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLV 349

Query: 1104 KQLCSELKDFMRKHNFSTIEDFRGVSLQYFTTHTDLVRRQQEAIRQRKAIKKGLQSDKDW 1283
            K+L  ELKDFM+KHNF++IEDFRG SLQYFTTHTDLV RQQEAI+QRKAIKKGLQSDKDW
Sbjct: 350  KKLSLELKDFMKKHNFTSIEDFRGASLQYFTTHTDLVHRQQEAIKQRKAIKKGLQSDKDW 409

Query: 1284 TGDGFVKESESMVSN 1328
            TGDGFVKESESMVSN
Sbjct: 410  TGDGFVKESESMVSN 424


>ref|NP_001234738.1| PYD1A protein [Solanum lycopersicum] gi|24850453|gb|AAN64920.1|
            putative dehydrogenase [Solanum lycopersicum]
          Length = 429

 Score =  689 bits (1777), Expect = 0.0
 Identities = 339/380 (89%), Positives = 357/380 (93%)
 Frame = +3

Query: 189  EPDLTVSVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPR 368
            EPDL+V+VNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWG VIAKTVSL+A KV NVTPR
Sbjct: 51   EPDLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLEADKVKNVTPR 110

Query: 369  YARLRVAGTNGSARGQIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNK 548
            YA+LR A  NGSA+GQIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNK
Sbjct: 111  YAKLR-ADANGSAKGQIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNK 169

Query: 549  DAWEELIGRVEETGVDAMEINFSCPHGMPERKMGAAVGQDCDLLGEVCGWINGVATVPVW 728
             AWEELI R EETG+DA EINFSCPHGMPER+MGAAVGQDCDLL EVCGWIN VATVPVW
Sbjct: 170  AAWEELIYRCEETGIDAFEINFSCPHGMPERRMGAAVGQDCDLLEEVCGWINAVATVPVW 229

Query: 729  AKMTPNITDITQPSRVALASGCEGVAAINTIMSVMGINLDTLHPEPCVEGYSTPGGYSAK 908
            AKMTPNITDIT+P+RVAL  GCEGV+AINTIMSVMGINLDTL PEPCVEGYSTPGGYS+K
Sbjct: 230  AKMTPNITDITKPARVALNQGCEGVSAINTIMSVMGINLDTLRPEPCVEGYSTPGGYSSK 289

Query: 909  AVHPIALGKVMNIAKMMHSEFANMDRSLSAIGGVETGADAAEFILLGADTVQVCTGVMMH 1088
            AVHPIAL KVMNIA+MM SEF + D SLSAIGGVETG DAAEFILLGADTVQVCTGVMMH
Sbjct: 290  AVHPIALAKVMNIARMMKSEFGDKDYSLSAIGGVETGGDAAEFILLGADTVQVCTGVMMH 349

Query: 1089 GYGLVKQLCSELKDFMRKHNFSTIEDFRGVSLQYFTTHTDLVRRQQEAIRQRKAIKKGLQ 1268
            GYGLVK LCSELKDFMRKHNFS+IEDFRG SL+YFTTHTDLVRRQQEAIRQRKA+KKGLQ
Sbjct: 350  GYGLVKTLCSELKDFMRKHNFSSIEDFRGTSLEYFTTHTDLVRRQQEAIRQRKAVKKGLQ 409

Query: 1269 SDKDWTGDGFVKESESMVSN 1328
            SDKDWTGDGFV+E+ESMVSN
Sbjct: 410  SDKDWTGDGFVQETESMVSN 429


>gb|ACJ84544.1| unknown [Medicago truncatula]
          Length = 424

 Score =  687 bits (1773), Expect = 0.0
 Identities = 350/435 (80%), Positives = 377/435 (86%), Gaps = 4/435 (0%)
 Frame = +3

Query: 36   MASLS----STLNLKPKLSFKNSISELPQSFKVDHVIFVNXXXXXXXXXXXXXXDEPDLT 203
            MA+LS     T N   + SF  S    P+  +VD  +F +               EPDL+
Sbjct: 1    MANLSMTQLKTRNSASRFSFNFSKKVYPRPSRVDFKVFASEGQV----------SEPDLS 50

Query: 204  VSVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLR 383
            V VNGL MPNPFVIGSGPPGTNYTVMKRAFDEGWG VIAKTVSLDAAKVINVTPRYARLR
Sbjct: 51   VKVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDAAKVINVTPRYARLR 110

Query: 384  VAGTNGSARGQIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKDAWEE 563
             A  NGSA+G+IIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNK AWEE
Sbjct: 111  -ANANGSAKGEIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNKAAWEE 169

Query: 564  LIGRVEETGVDAMEINFSCPHGMPERKMGAAVGQDCDLLGEVCGWINGVATVPVWAKMTP 743
            LI RVE+TG+DA+EINFSCPHGMPERKMGAAVGQDC LL EVCGWIN  ATVPVWAKMTP
Sbjct: 170  LIDRVEQTGIDAIEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVWAKMTP 229

Query: 744  NITDITQPSRVALASGCEGVAAINTIMSVMGINLDTLHPEPCVEGYSTPGGYSAKAVHPI 923
            NITDI+QP+RVAL+SGCEG+AAINTIMSVMGINL+TL PEPCVEGYSTPGGYSAKAVHPI
Sbjct: 230  NITDISQPARVALSSGCEGIAAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSAKAVHPI 289

Query: 924  ALGKVMNIAKMMHSEFANMDRSLSAIGGVETGADAAEFILLGADTVQVCTGVMMHGYGLV 1103
            ALGKVM+IAKMM SEF + + SLSAIGGVETG DAAEFILLGA+TVQVCTGVMMHGYGLV
Sbjct: 290  ALGKVMSIAKMMKSEFDSENYSLSAIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLV 349

Query: 1104 KQLCSELKDFMRKHNFSTIEDFRGVSLQYFTTHTDLVRRQQEAIRQRKAIKKGLQSDKDW 1283
            K+L  ELKDFM+KHNF++IEDFRG SLQYFTTHTDLV R+QEAI+QRKAIKKGLQSDKDW
Sbjct: 350  KKLSLELKDFMKKHNFTSIEDFRGASLQYFTTHTDLVHRRQEAIKQRKAIKKGLQSDKDW 409

Query: 1284 TGDGFVKESESMVSN 1328
            TGDGFVKESESMVSN
Sbjct: 410  TGDGFVKESESMVSN 424


>ref|XP_002283095.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
            [Vitis vinifera]
          Length = 421

 Score =  684 bits (1764), Expect = 0.0
 Identities = 338/380 (88%), Positives = 360/380 (94%)
 Frame = +3

Query: 189  EPDLTVSVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPR 368
            EPDL+V+VNGL MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPR
Sbjct: 44   EPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPR 103

Query: 369  YARLRVAGTNGSARGQIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNK 548
            YARLRV G NGSA+GQIIGW+NIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEY+K
Sbjct: 104  YARLRV-GANGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYDK 162

Query: 549  DAWEELIGRVEETGVDAMEINFSCPHGMPERKMGAAVGQDCDLLGEVCGWINGVATVPVW 728
             AWEELI RVE+TG+DA+EINFSCPHGMPERKMGAAVGQDC LL EVCGWIN  ATVPVW
Sbjct: 163  AAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVW 222

Query: 729  AKMTPNITDITQPSRVALASGCEGVAAINTIMSVMGINLDTLHPEPCVEGYSTPGGYSAK 908
            AKMTPNITDITQP+RVAL+SGCEGV+AINTIMSVMGINL+TL PEPCVEGYSTPGGYS K
Sbjct: 223  AKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSCK 282

Query: 909  AVHPIALGKVMNIAKMMHSEFANMDRSLSAIGGVETGADAAEFILLGADTVQVCTGVMMH 1088
            AVHPIALGKVM+IAKMM +EF   D SLS IGGVETG DAAEFILLGA+TVQVCTGVMMH
Sbjct: 283  AVHPIALGKVMSIAKMMKAEFGE-DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 341

Query: 1089 GYGLVKQLCSELKDFMRKHNFSTIEDFRGVSLQYFTTHTDLVRRQQEAIRQRKAIKKGLQ 1268
            GYGLVK+LCSELKDFM+ HNFS+IEDFRG SL+YFTTHTDLV+RQQEAIRQRKAI++GLQ
Sbjct: 342  GYGLVKKLCSELKDFMKMHNFSSIEDFRGASLEYFTTHTDLVQRQQEAIRQRKAIRQGLQ 401

Query: 1269 SDKDWTGDGFVKESESMVSN 1328
            SDKDWTGDGFVKESESMVSN
Sbjct: 402  SDKDWTGDGFVKESESMVSN 421


>emb|CAN75682.1| hypothetical protein VITISV_038955 [Vitis vinifera]
          Length = 401

 Score =  684 bits (1764), Expect = 0.0
 Identities = 338/380 (88%), Positives = 360/380 (94%)
 Frame = +3

Query: 189  EPDLTVSVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPR 368
            EPDL+V+VNGL MPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPR
Sbjct: 24   EPDLSVTVNGLHMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPR 83

Query: 369  YARLRVAGTNGSARGQIIGWQNIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYNK 548
            YARLRV G NGSA+GQIIGW+NIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEY+K
Sbjct: 84   YARLRV-GANGSAKGQIIGWENIELISDRPLETMLKEFKQLKEEYPDRILIASIMEEYDK 142

Query: 549  DAWEELIGRVEETGVDAMEINFSCPHGMPERKMGAAVGQDCDLLGEVCGWINGVATVPVW 728
             AWEELI RVE+TG+DA+EINFSCPHGMPERKMGAAVGQDC LL EVCGWIN  ATVPVW
Sbjct: 143  AAWEELIDRVEQTGIDALEINFSCPHGMPERKMGAAVGQDCALLEEVCGWINAKATVPVW 202

Query: 729  AKMTPNITDITQPSRVALASGCEGVAAINTIMSVMGINLDTLHPEPCVEGYSTPGGYSAK 908
            AKMTPNITDITQP+RVAL+SGCEGV+AINTIMSVMGINL+TL PEPCVEGYSTPGGYS K
Sbjct: 203  AKMTPNITDITQPARVALSSGCEGVSAINTIMSVMGINLNTLRPEPCVEGYSTPGGYSCK 262

Query: 909  AVHPIALGKVMNIAKMMHSEFANMDRSLSAIGGVETGADAAEFILLGADTVQVCTGVMMH 1088
            AVHPIALGKVM+IAKMM +EF   D SLS IGGVETG DAAEFILLGA+TVQVCTGVMMH
Sbjct: 263  AVHPIALGKVMSIAKMMKAEFGE-DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 321

Query: 1089 GYGLVKQLCSELKDFMRKHNFSTIEDFRGVSLQYFTTHTDLVRRQQEAIRQRKAIKKGLQ 1268
            GYGLVK+LCSELKDFM+ HNFS+IEDFRG SL+YFTTHTDLV+RQQEAIRQRKAI++GLQ
Sbjct: 322  GYGLVKKLCSELKDFMKMHNFSSIEDFRGASLEYFTTHTDLVQRQQEAIRQRKAIRQGLQ 381

Query: 1269 SDKDWTGDGFVKESESMVSN 1328
            SDKDWTGDGFVKESESMVSN
Sbjct: 382  SDKDWTGDGFVKESESMVSN 401