BLASTX nr result

ID: Lithospermum22_contig00002013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002013
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540530.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    67   2e-09
ref|XP_003542854.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-l...    65   6e-09
gb|ACU21297.1| unknown [Glycine max]                                   65   6e-09
ref|XP_002279794.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER [...    62   4e-08
ref|XP_003627695.1| E3 ubiquitin-protein ligase Arkadia [Medicag...    62   6e-08

>ref|XP_003540530.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
          Length = 247

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = -1

Query: 256 YRYGLSIQPSTSYYGLYEADHFLPHMDQSVRVWEYP-TMMTIEDPIIIDAPSRANRIRNI 80
           Y++GLS   STSYY  YE +  LP M+     WEYP T+ T+E+P   D+P R + + N+
Sbjct: 59  YKFGLSGPGSTSYYSSYEVNGHLPRMEIDRAEWEYPSTITTVEEPATTDSPPRRDGVTNM 118

Query: 79  DSIPDESAGSRNHQEGDNS 23
            +IP+E   S NH E ++S
Sbjct: 119 QTIPEEC--SPNHHESNSS 135


>ref|XP_003542854.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Glycine max]
          Length = 247

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = -1

Query: 256 YRYGLSIQPSTSYYGLYEADHFLPHMDQSVRVWEYP-TMMTIEDPIIIDAPSRANRIRNI 80
           Y++GLS   STSYY  YE +  LP M+     WEYP T+ T+E+P   D+P R + + ++
Sbjct: 59  YKFGLSGPGSTSYYSSYEVNGHLPRMEIDRAEWEYPSTITTVEEPATTDSPPRRDGVTSM 118

Query: 79  DSIPDESAGSRNHQEGDNS 23
            +IP+E   S NH E ++S
Sbjct: 119 QTIPEEC--SPNHHESNSS 135


>gb|ACU21297.1| unknown [Glycine max]
          Length = 207

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
 Frame = -1

Query: 256 YRYGLSIQPSTSYYGLYEADHFLPHMDQSVRVWEYP-TMMTIEDPIIIDAPSRANRIRNI 80
           Y++GLS   STSYY  YE +  LP M+     WEYP T+ T+E+P   D+P R + + ++
Sbjct: 59  YKFGLSGPGSTSYYSSYEVNGHLPRMEIDRAEWEYPSTITTVEEPATTDSPPRRDGVTSM 118

Query: 79  DSIPDESAGSRNHQEGDNS 23
            +IP+E   S NH E ++S
Sbjct: 119 QTIPEEC--SPNHHESNSS 135


>ref|XP_002279794.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER [Vitis vinifera]
           gi|297736239|emb|CBI24877.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/79 (36%), Positives = 47/79 (59%)
 Frame = -1

Query: 259 SYRYGLSIQPSTSYYGLYEADHFLPHMDQSVRVWEYPTMMTIEDPIIIDAPSRANRIRNI 80
           SY++G S  P ++YYG Y+ +  +P ++ S R WEYP+ M +E+P  I+     N + N+
Sbjct: 61  SYKFGFS-GPGSTYYGPYDVNEHVPGIEVSRRPWEYPSSMIVEEPTTIETQPTGNEVMNV 119

Query: 79  DSIPDESAGSRNHQEGDNS 23
            +IP+E   S NH    +S
Sbjct: 120 HAIPEEC--SPNHYSATSS 136


>ref|XP_003627695.1| E3 ubiquitin-protein ligase Arkadia [Medicago truncatula]
           gi|355521717|gb|AET02171.1| E3 ubiquitin-protein ligase
           Arkadia [Medicago truncatula]
          Length = 288

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/78 (41%), Positives = 48/78 (61%)
 Frame = -1

Query: 256 YRYGLSIQPSTSYYGLYEADHFLPHMDQSVRVWEYPTMMTIEDPIIIDAPSRANRIRNID 77
           Y++G+S   STSYY  YE +  LP M+ +   WEYP+ +  E+P   D+P R + + N+ 
Sbjct: 60  YKFGMSGPGSTSYYNSYELNDNLPRMENNRVEWEYPSEVISEEPATSDSPPRRDGV-NMQ 118

Query: 76  SIPDESAGSRNHQEGDNS 23
           +IP+E   S NHQE  +S
Sbjct: 119 TIPEEC--SPNHQESSSS 134


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