BLASTX nr result

ID: Lithospermum22_contig00001921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001921
         (1192 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]        152   2e-34
sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; A...   152   2e-34
gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]       152   2e-34
gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]       150   5e-34
gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]       140   8e-31

>gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
          Length = 203

 Score =  152 bits (384), Expect = 2e-34
 Identities = 72/96 (75%), Positives = 84/96 (87%)
 Frame = -3

Query: 1112 MEFWGVEVKSGTPLKVKPEEGMVIHLSQASMGEVKANKTESVNLFINVDGKKLVLGTLLS 933
            MEFWG EVKSG PL V+P +GMV+HLSQAS+GE+K +K+ESV L +N+DGKKLVLGTL S
Sbjct: 1    MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60

Query: 932  DKLPQQLFDLVFDRDFELSHNSKSGSIYFFGYKGDN 825
            +K+PQQ FDLVFDRDFELSHN KSGS+YFFGYK  N
Sbjct: 61   EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATN 96


>sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1; AltName: Full=Histone
            deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
            gi|33667906|gb|AAQ24532.1| histone deacetylase [Solanum
            chacoense]
          Length = 269

 Score =  152 bits (384), Expect = 2e-34
 Identities = 72/96 (75%), Positives = 84/96 (87%)
 Frame = -3

Query: 1112 MEFWGVEVKSGTPLKVKPEEGMVIHLSQASMGEVKANKTESVNLFINVDGKKLVLGTLLS 933
            MEFWG EVKSG PL V+P +GMV+HLSQAS+GE+K +K+ESV L +N+DGKKLVLGTL S
Sbjct: 1    MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60

Query: 932  DKLPQQLFDLVFDRDFELSHNSKSGSIYFFGYKGDN 825
            +K+PQQ FDLVFDRDFELSHN KSGS+YFFGYK  N
Sbjct: 61   EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATN 96



 Score =  118 bits (296), Expect = 3e-24
 Identities = 61/97 (62%), Positives = 67/97 (69%), Gaps = 2/97 (2%)
 Frame = -3

Query: 509 PKKVVSGKKRGAESAIKTPVSQKKAKRVTPQKTDGKSG--HVATPHPSKQAGKTPASKAD 336
           PKK    K+R A+SA KTPV+ KKAK  TPQKTDGK G  HVATPHPSKQA KTP     
Sbjct: 182 PKKAEPAKRRKADSATKTPVTDKKAKLTTPQKTDGKKGGGHVATPHPSKQASKTP----- 236

Query: 335 KKTPKSGGVHSCGPCNKGFSSESALQAHTKAKHSAGK 225
               KS G H C PCN+ F SE AL +H+KAKHSAGK
Sbjct: 237 ----KSAGSHHCKPCNRSFGSEGALDSHSKAKHSAGK 269


>gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
          Length = 295

 Score =  152 bits (384), Expect = 2e-34
 Identities = 72/96 (75%), Positives = 83/96 (86%)
 Frame = -3

Query: 1112 MEFWGVEVKSGTPLKVKPEEGMVIHLSQASMGEVKANKTESVNLFINVDGKKLVLGTLLS 933
            MEFWG EVKSG PL V+P +GMV+HLSQAS+GE+K +K +SV L +N+DGKKLVLGTL S
Sbjct: 1    MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKAQSVCLSVNIDGKKLVLGTLSS 60

Query: 932  DKLPQQLFDLVFDRDFELSHNSKSGSIYFFGYKGDN 825
            DK+PQQ FDLVFDRDFELSHN KSGS+YFFGYK  N
Sbjct: 61   DKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATN 96



 Score =  137 bits (344), Expect = 7e-30
 Identities = 69/97 (71%), Positives = 79/97 (81%), Gaps = 2/97 (2%)
 Frame = -3

Query: 509 PKKVVSGKKRGAESAIKTPVSQKKAKRVTPQKTDGK--SGHVATPHPSKQAGKTPASKAD 336
           PKK   GKKR A+SA KTPV  KKAK VTPQKTDGK  SGHVATPHPSKQAGK+PA+K +
Sbjct: 200 PKKAEPGKKRKADSATKTPVPDKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKSPANK-N 258

Query: 335 KKTPKSGGVHSCGPCNKGFSSESALQAHTKAKHSAGK 225
           ++TPKSGG H C  CN+GF SE+AL+ H+KAKHSA K
Sbjct: 259 QQTPKSGGAHLCKTCNRGFGSENALEFHSKAKHSAAK 295


>gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
          Length = 294

 Score =  150 bits (380), Expect = 5e-34
 Identities = 71/96 (73%), Positives = 83/96 (86%)
 Frame = -3

Query: 1112 MEFWGVEVKSGTPLKVKPEEGMVIHLSQASMGEVKANKTESVNLFINVDGKKLVLGTLLS 933
            MEFWG EVKSG PL V+P +GMV+HLSQAS+GE+K +K +SV L +N+DGKKLVLGTL S
Sbjct: 1    MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKVQSVCLSVNIDGKKLVLGTLNS 60

Query: 932  DKLPQQLFDLVFDRDFELSHNSKSGSIYFFGYKGDN 825
            DK+PQQ FDLVFDRDFELSHN K+GS+YFFGYK  N
Sbjct: 61   DKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATN 96



 Score =  132 bits (333), Expect = 1e-28
 Identities = 68/97 (70%), Positives = 80/97 (82%), Gaps = 2/97 (2%)
 Frame = -3

Query: 509 PKKVVSGKKRGAESAIKTPVSQKKAKRVTPQKTDGK--SGHVATPHPSKQAGKTPASKAD 336
           PKK   GKKR A+SA KTP + KKAK VTPQKTDGK  SGHVATPHPSKQAGK+PA+K +
Sbjct: 200 PKKAEPGKKRKADSATKTP-ADKKAKFVTPQKTDGKKGSGHVATPHPSKQAGKSPANK-N 257

Query: 335 KKTPKSGGVHSCGPCNKGFSSESALQAHTKAKHSAGK 225
           ++TPKSGG H C  CN+GF SE+AL++H+KAKHSA K
Sbjct: 258 QQTPKSGGAHLCKTCNRGFGSENALESHSKAKHSAAK 294


>gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
          Length = 282

 Score =  140 bits (352), Expect = 8e-31
 Identities = 70/97 (72%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
 Frame = -3

Query: 1112 MEFWGVEVKSGTPLKVKPEEGMVIHLSQASMGEVKANK-TESVNLFINVDGKKLVLGTLL 936
            MEFWG EVKSG PL V+P + MV+HLSQAS+GE K +K +E V L +NVDGKKL LGTL 
Sbjct: 1    MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60

Query: 935  SDKLPQQLFDLVFDRDFELSHNSKSGSIYFFGYKGDN 825
             DKLPQQ FDLVFDRDFELSHN K+GS+YFFGYK  N
Sbjct: 61   LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAAN 97



 Score =  120 bits (302), Expect = 5e-25
 Identities = 61/97 (62%), Positives = 74/97 (76%), Gaps = 2/97 (2%)
 Frame = -3

Query: 509 PKKVVSGKKRGAESAIKTPVSQKKAKRVTPQKTDGKSG--HVATPHPSKQAGKTPASKAD 336
           PKK    KKR ++SAIKTP   KKAK  TPQKTDGK G  HVATPHPSKQAGKT  +K++
Sbjct: 187 PKKAEPSKKRPSDSAIKTPAPDKKAKFATPQKTDGKKGAVHVATPHPSKQAGKTSGNKSN 246

Query: 335 KKTPKSGGVHSCGPCNKGFSSESALQAHTKAKHSAGK 225
            +TPKSGG  +C  C++ F SE+AL++H+KAKHS GK
Sbjct: 247 -QTPKSGGSLACKTCSRTFGSETALESHSKAKHSVGK 282


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