BLASTX nr result

ID: Lithospermum22_contig00001873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001873
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171639.1| PREDICTED: sec-independent protein transloca...   121   2e-25
ref|XP_004135654.1| PREDICTED: sec-independent protein transloca...   121   2e-25
ref|XP_002531294.1| conserved hypothetical protein [Ricinus comm...   118   2e-24
ref|XP_002328498.1| predicted protein [Populus trichocarpa] gi|1...   117   3e-24
ref|NP_001238018.1| uncharacterized protein LOC100306385 [Glycin...   117   4e-24

>ref|XP_004171639.1| PREDICTED: sec-independent protein translocase protein TATA,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 146

 Score =  121 bits (304), Expect = 2e-25
 Identities = 64/110 (58%), Positives = 78/110 (70%)
 Frame = +3

Query: 327 RTRDNGKKRGMSCKSIFGLGVPELVVIGGVIALVFGPSKLPEVGRSFGKTIKSFQQAAKE 506
           RT      +G +C ++FGLGVPELVVI GV ALVFGP KLPEVG+S GKT+KSFQQAAKE
Sbjct: 47  RTTTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKE 106

Query: 507 FETELKKEPEPGAETSQENAIAESNEEIPKSAALSEEKQDLSV*MQRESM 656
           FE+ELKKEPEP  ETS E            ++  +EE+QDL V  Q+E++
Sbjct: 107 FESELKKEPEPTEETSVEK----------PTSTEAEERQDLKVSNQKETV 146


>ref|XP_004135654.1| PREDICTED: sec-independent protein translocase protein TATA,
           chloroplastic-like [Cucumis sativus]
          Length = 158

 Score =  121 bits (304), Expect = 2e-25
 Identities = 64/110 (58%), Positives = 78/110 (70%)
 Frame = +3

Query: 327 RTRDNGKKRGMSCKSIFGLGVPELVVIGGVIALVFGPSKLPEVGRSFGKTIKSFQQAAKE 506
           RT      +G +C ++FGLGVPELVVI GV ALVFGP KLPEVG+S GKT+KSFQQAAKE
Sbjct: 59  RTTTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKE 118

Query: 507 FETELKKEPEPGAETSQENAIAESNEEIPKSAALSEEKQDLSV*MQRESM 656
           FE+ELKKEPEP  ETS E            ++  +EE+QDL V  Q+E++
Sbjct: 119 FESELKKEPEPTEETSVEK----------PTSTEAEERQDLKVSNQKETV 158


>ref|XP_002531294.1| conserved hypothetical protein [Ricinus communis]
           gi|223529127|gb|EEF31107.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 149

 Score =  118 bits (295), Expect = 2e-24
 Identities = 60/103 (58%), Positives = 76/103 (73%)
 Frame = +3

Query: 321 KARTRDNGKKRGMSCKSIFGLGVPELVVIGGVIALVFGPSKLPEVGRSFGKTIKSFQQAA 500
           K R+R    ++G++C ++FGLGVPELVVI GV ALVFGP KLPEVGRS GKT+KSFQ+AA
Sbjct: 48  KTRSRTERTRKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGKTVKSFQEAA 107

Query: 501 KEFETELKKEPEPGAETSQENAIAESNEEIPKSAALSEEKQDL 629
           KEFE+ELKKEP+   E+  E   A S EE  + A +S  K+ +
Sbjct: 108 KEFESELKKEPDSALESPGETPTAIS-EEKKQDAEVSSSKESV 149


>ref|XP_002328498.1| predicted protein [Populus trichocarpa] gi|118482145|gb|ABK93003.1|
           unknown [Populus trichocarpa]
           gi|222838213|gb|EEE76578.1| predicted protein [Populus
           trichocarpa]
          Length = 148

 Score =  117 bits (294), Expect = 3e-24
 Identities = 60/115 (52%), Positives = 79/115 (68%)
 Frame = +3

Query: 276 FFNRTSQRAGFGPTIKARTRDNGKKRGMSCKSIFGLGVPELVVIGGVIALVFGPSKLPEV 455
           FFN++S+        K R+R    K+G++C ++FGLGVPELVVI GV  L+FGP +LPEV
Sbjct: 32  FFNKSSKSYNSLVLGKTRSRSQRAKKGLTCNALFGLGVPELVVIAGVATLLFGPKQLPEV 91

Query: 456 GRSFGKTIKSFQQAAKEFETELKKEPEPGAETSQENAIAESNEEIPKSAALSEEK 620
           GRS GKT+KSFQQAAKEFE+ELKKEP+  ++T  E     S E+   S   S ++
Sbjct: 92  GRSIGKTVKSFQQAAKEFESELKKEPDSTSDTPGEQPTTISEEKKHDSEVSSSKE 146


>ref|NP_001238018.1| uncharacterized protein LOC100306385 [Glycine max]
           gi|255628373|gb|ACU14531.1| unknown [Glycine max]
          Length = 142

 Score =  117 bits (293), Expect = 4e-24
 Identities = 61/115 (53%), Positives = 76/115 (66%)
 Frame = +3

Query: 279 FNRTSQRAGFGPTIKARTRDNGKKRGMSCKSIFGLGVPELVVIGGVIALVFGPSKLPEVG 458
           FN  S R      +       G+ +G+SC ++FGLGVPELVVI GV ALVFGP KLPEVG
Sbjct: 32  FNSVSVR------VAVNVNGRGRNKGLSCNAMFGLGVPELVVIAGVAALVFGPKKLPEVG 85

Query: 459 RSFGKTIKSFQQAAKEFETELKKEPEPGAETSQENAIAESNEEIPKSAALSEEKQ 623
           RS GKT+KSFQQAAKEFE+ELKKEP+     S E +I  S ++  +   +S  K+
Sbjct: 86  RSIGKTVKSFQQAAKEFESELKKEPDSTEGDSSEKSIVVSEKQQQQDNEVSTSKE 140


Top