BLASTX nr result

ID: Lithospermum22_contig00001872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001872
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   263   1e-68
ref|XP_004173736.1| PREDICTED: uncharacterized protein LOC101232...   251   6e-65
emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]                   249   2e-64
ref|NP_177856.2| topoisomerase (DNA) II binding protein 1 [Arabi...   249   2e-64
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              241   5e-62

>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine
           max]
          Length = 970

 Score =  263 bits (671), Expect = 1e-68
 Identities = 126/173 (72%), Positives = 148/173 (85%)
 Frame = -1

Query: 520 DLKAKGCNLLGPHCVLTCAKERRPLPNQGFTCCLAMDGVKVMASGFDIDEKVEIGKMVAG 341
           DLK+KGC LLGP CVL+CAK  RPLP QGFTCCLAMDGVKV+ASGFD DEKV+I ++VA 
Sbjct: 65  DLKSKGCKLLGPICVLSCAKGGRPLPKQGFTCCLAMDGVKVLASGFDTDEKVKIEELVAE 124

Query: 340 MGGVLQVRSSTDISFVIVKNVLAAKYKLALNDLRKPIVTKDWVYQCWKEHRVVPHELYKV 161
           MGGVL  ++S D++FV+VKNVLAAKYK ALN L+KPIVT +W+ QC  EHRVVP E YKV
Sbjct: 125 MGGVLHTKASLDLNFVVVKNVLAAKYKWALNILKKPIVTYEWLKQCSDEHRVVPQESYKV 184

Query: 160 LPFTGLRIYVSRIPAVERKKMEKLIMQNGGKYSAELTRKCTHLVCDAPEGDNY 2
           LPF+GL+I V+ IPA  RK+MEKLI+QNGGKYSAELT+KCTHL+ +APEGD Y
Sbjct: 185 LPFSGLKICVTGIPADNRKEMEKLILQNGGKYSAELTKKCTHLISEAPEGDKY 237


>ref|XP_004173736.1| PREDICTED: uncharacterized protein LOC101232490 [Cucumis sativus]
          Length = 270

 Score =  251 bits (640), Expect = 6e-65
 Identities = 120/172 (69%), Positives = 141/172 (81%), Gaps = 6/172 (3%)
 Frame = -1

Query: 520 DLKAKGCNLLGPHCVLTCAKERRPLPNQGFTCCLAMDGVKVMASGFDIDEKVEIGKMVAG 341
           DL+AKGCNLLGP CV++CAKE RPLP QG+TCCLAMDGVK++ASGF  DEKVEIGK+V+ 
Sbjct: 65  DLRAKGCNLLGPQCVMSCAKEHRPLPQQGYTCCLAMDGVKILASGFQEDEKVEIGKLVSA 124

Query: 340 MGGVLQVRSSTDISFVIVKNVLAAKYKLALNDLRKPIVTKDWVYQCWKEHRVVPHELYKV 161
           MGGVL  ++S D+SFVI KN LAAKYK ALN  +KPIV+  W+ QCW EHRVVP E Y+V
Sbjct: 125 MGGVLHTKASLDVSFVIAKNALAAKYKWALNISKKPIVSFSWLQQCWIEHRVVPQEGYRV 184

Query: 160 LPFTGLRIYVSRIPAVERKK------MEKLIMQNGGKYSAELTRKCTHLVCD 23
           LPF+GL I VS IPA E K+      MEKLI+QNGG+YSA+LTRKCTHL+CD
Sbjct: 185 LPFSGLNISVSGIPAGELKEMAKLILMEKLILQNGGRYSADLTRKCTHLICD 236


>emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]
          Length = 972

 Score =  249 bits (636), Expect = 2e-64
 Identities = 119/173 (68%), Positives = 143/173 (82%)
 Frame = -1

Query: 520 DLKAKGCNLLGPHCVLTCAKERRPLPNQGFTCCLAMDGVKVMASGFDIDEKVEIGKMVAG 341
           DLKAKGCNL+GP C L CAKE RPLP +GFTCCLAMDG+KV+ASGF +DEKV+I ++V  
Sbjct: 65  DLKAKGCNLIGPQCALFCAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKVKIKELVTS 124

Query: 340 MGGVLQVRSSTDISFVIVKNVLAAKYKLALNDLRKPIVTKDWVYQCWKEHRVVPHELYKV 161
           MGGVL  R+S+D++FVIVKNVLAAKYK ALN  +KPIVT +W+++CW EHRVVP E YK+
Sbjct: 125 MGGVLLSRASSDVNFVIVKNVLAAKYKWALN--KKPIVTLNWLHRCWNEHRVVPQEPYKI 182

Query: 160 LPFTGLRIYVSRIPAVERKKMEKLIMQNGGKYSAELTRKCTHLVCDAPEGDNY 2
            PF+GL I V+RIPA ERK MEK+I + GG YSAELT+ CTHL+ DA EGD Y
Sbjct: 183 PPFSGLTICVTRIPADERKGMEKVISEYGGSYSAELTKSCTHLIADAAEGDKY 235


>ref|NP_177856.2| topoisomerase (DNA) II binding protein 1 [Arabidopsis thaliana]
           gi|332197842|gb|AEE35963.1| topoisomerase (DNA) II
           binding protein 1 [Arabidopsis thaliana]
          Length = 972

 Score =  249 bits (636), Expect = 2e-64
 Identities = 119/173 (68%), Positives = 143/173 (82%)
 Frame = -1

Query: 520 DLKAKGCNLLGPHCVLTCAKERRPLPNQGFTCCLAMDGVKVMASGFDIDEKVEIGKMVAG 341
           DLKAKGCNL+GP C L CAKE RPLP +GFTCCLAMDG+KV+ASGF +DEKV+I ++V  
Sbjct: 65  DLKAKGCNLIGPQCALFCAKEGRPLPQRGFTCCLAMDGLKVLASGFLVDEKVKIKELVTS 124

Query: 340 MGGVLQVRSSTDISFVIVKNVLAAKYKLALNDLRKPIVTKDWVYQCWKEHRVVPHELYKV 161
           MGGVL  R+S+D++FVIVKNVLAAKYK ALN  +KPIVT +W+++CW EHRVVP E YK+
Sbjct: 125 MGGVLLSRASSDVNFVIVKNVLAAKYKWALN--KKPIVTLNWLHRCWNEHRVVPQEPYKI 182

Query: 160 LPFTGLRIYVSRIPAVERKKMEKLIMQNGGKYSAELTRKCTHLVCDAPEGDNY 2
            PF+GL I V+RIPA ERK MEK+I + GG YSAELT+ CTHL+ DA EGD Y
Sbjct: 183 PPFSGLTICVTRIPADERKGMEKVISEYGGSYSAELTKSCTHLIADAAEGDKY 235


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  241 bits (615), Expect = 5e-62
 Identities = 116/176 (65%), Positives = 143/176 (81%), Gaps = 3/176 (1%)
 Frame = -1

Query: 520 DLKAKGCNLLGPHCVLTCAKERRPLPNQGFTCCLAMDGVKVMASGFDIDEKVEIGKMVAG 341
           DL+AKGCNLLGP CVL+CAKE RPLP QGFTCCLAMDGVKV+ASGFD+DEKV+IGK+V  
Sbjct: 65  DLRAKGCNLLGPQCVLSCAKEHRPLPKQGFTCCLAMDGVKVLASGFDMDEKVKIGKLVTA 124

Query: 340 MGGVLQVRSSTDISFVIVKNVLAAKY-KLALNDLRKPIVTKDWVYQCWKEHRVVPHELYK 164
           MGGVL  ++S+D++ +    +L   + + A N L+KPIVT +W++QCW EHRVVP E Y+
Sbjct: 125 MGGVLHTKASSDVNLISCLILLLYVFLQWASNILKKPIVTINWLHQCWTEHRVVPQESYR 184

Query: 163 VLPFTGLRIYVSRIPAVERKKMEKLIMQNGGKYSAELTRKCTHLVCD--APEGDNY 2
           VLPF+GL I V++IPA ERK+ME LI QNGGKYSA+LTR CTHL+ D  +PEGD Y
Sbjct: 185 VLPFSGLTICVTKIPADERKEMEILIKQNGGKYSADLTRNCTHLITDISSPEGDKY 240


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