BLASTX nr result

ID: Lithospermum22_contig00001871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001871
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   111   7e-23
ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding prote...   110   9e-23
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              110   9e-23
dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]                          107   8e-22
ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   106   2e-21

>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
           topbp1, putative [Ricinus communis]
          Length = 950

 Score =  111 bits (277), Expect = 7e-23
 Identities = 49/64 (76%), Positives = 56/64 (87%)
 Frame = +3

Query: 51  MNNGVFKGANVFMSRNLVPPEQFDTLHDALKLNGAQVFLCCDPSRNSPNDYHIISAPNHD 230
           +N   F+GANVFMSRNLVPPE FD L DAL+LNGAQV LCCDPSRN PNDYHIIS+P+H+
Sbjct: 2   LNTKTFRGANVFMSRNLVPPEVFDALLDALRLNGAQVLLCCDPSRNGPNDYHIISSPDHE 61

Query: 231 KFDD 242
           KF+D
Sbjct: 62  KFED 65


>ref|XP_002284611.2| PREDICTED: DNA topoisomerase 2-binding protein 1-B-like [Vitis
           vinifera]
          Length = 962

 Score =  110 bits (276), Expect = 9e-23
 Identities = 49/58 (84%), Positives = 54/58 (93%)
 Frame = +3

Query: 69  KGANVFMSRNLVPPEQFDTLHDALKLNGAQVFLCCDPSRNSPNDYHIISAPNHDKFDD 242
           KGANVFMSRNLVPPE FD+LHDALKLNGA VFLCCDPSRN PNDYHIIS+ +H+KF+D
Sbjct: 8   KGANVFMSRNLVPPELFDSLHDALKLNGADVFLCCDPSRNGPNDYHIISSSDHEKFED 65


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  110 bits (276), Expect = 9e-23
 Identities = 49/58 (84%), Positives = 54/58 (93%)
 Frame = +3

Query: 69  KGANVFMSRNLVPPEQFDTLHDALKLNGAQVFLCCDPSRNSPNDYHIISAPNHDKFDD 242
           KGANVFMSRNLVPPE FD+LHDALKLNGA VFLCCDPSRN PNDYHIIS+ +H+KF+D
Sbjct: 8   KGANVFMSRNLVPPELFDSLHDALKLNGADVFLCCDPSRNGPNDYHIISSSDHEKFED 65


>dbj|BAJ53188.1| JMS09K11.6 [Jatropha curcas]
          Length = 918

 Score =  107 bits (268), Expect = 8e-22
 Identities = 48/59 (81%), Positives = 53/59 (89%)
 Frame = +3

Query: 66  FKGANVFMSRNLVPPEQFDTLHDALKLNGAQVFLCCDPSRNSPNDYHIISAPNHDKFDD 242
           F GANVFMSRNLVPPE FD L DALK NGA+VFLCCDPSRN PNDYHIIS+P+H+KF+D
Sbjct: 7   FNGANVFMSRNLVPPEVFDALLDALKHNGAEVFLCCDPSRNGPNDYHIISSPDHEKFED 65


>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine
           max]
          Length = 970

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/59 (79%), Positives = 52/59 (88%)
 Frame = +3

Query: 66  FKGANVFMSRNLVPPEQFDTLHDALKLNGAQVFLCCDPSRNSPNDYHIISAPNHDKFDD 242
           F+GANVFMSRNLVPPE FD LHDA+K NGAQ+ LCCDPSRN PNDYHIIS+  H+KFDD
Sbjct: 7   FQGANVFMSRNLVPPEVFDKLHDAVKDNGAQIHLCCDPSRNGPNDYHIISSSKHEKFDD 65


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