BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001865
         (1359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B,...   250   7e-64
sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, c...   248   2e-63
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   244   3e-62
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    244   5e-62
ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana] gi|122...   244   5e-62

>sp|Q08937.1|ROC2_NICSY RecName: Full=29 kDa ribonucleoprotein B, chloroplastic; AltName:
            Full=CP29B; Flags: Precursor gi|14135|emb|CAA43428.1|
            29kD B ribonucleoprotein [Nicotiana sylvestris]
          Length = 291

 Score =  250 bits (638), Expect = 7e-64
 Identities = 143/261 (54%), Positives = 171/261 (65%), Gaps = 5/261 (1%)
 Frame = -1

Query: 1128 STTHCSIRHFVGSRLVTKVAASEFNXXXXXXXXXXXXXXXXXXXXXDVQQRTFSADLKVF 949
            ST  CSI+ F  S   T+VA S F+                       +Q  FS DLK+F
Sbjct: 46   STGLCSIKPFESS-FSTRVALSGFDQLEDDVEV--------------AEQPRFSEDLKLF 90

Query: 948  VGNLPFTADSSTLAGLFGRAGNVEMAEVIYDRDSGRSRGFGFVTMSSAKEVDAAVRQFNG 769
            VGNLPF+ DS+ LAGLF RAGNVEM EVIYD+ +GRSRGFGFVTMS+ +EV+AA +QFNG
Sbjct: 91   VGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNG 150

Query: 768  YELDGRELRVNSGPAPPKRD-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVY 604
            YE+DGR +RVN+GPAP KR+                                     RVY
Sbjct: 151  YEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGARGGRSVDSSNRVY 210

Query: 603  VGNLSWGVDDLALQNLFRGQGNVKEARVVYDRESGRSRGFGFVTFSSAQEVNSAIEALDG 424
            VGNLSWGVDDLAL+ LF  QGNV +A+VVYDR+SGRSRGFGFVT+SS++EVN AI++L+G
Sbjct: 211  VGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNG 270

Query: 423  ADLDGRSIRVSPAEERQRRQY 361
             DLDGRSIRVS AEER RRQ+
Sbjct: 271  VDLDGRSIRVSAAEERPRRQF 291


>sp|P49314.1|ROC2_NICPL RecName: Full=31 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP31; Flags: Precursor gi|19710|emb|CAA46233.1|
           RNA binding protein 31 [Nicotiana plumbaginifolia]
          Length = 292

 Score =  248 bits (634), Expect = 2e-63
 Identities = 132/213 (61%), Positives = 156/213 (73%), Gaps = 5/213 (2%)
 Frame = -1

Query: 984 QQRTFSADLKVFVGNLPFTADSSTLAGLFGRAGNVEMAEVIYDRDSGRSRGFGFVTMSSA 805
           +Q  FS DLK+FVGNLPF+ DS+ LAGLF RAGNVE+ EVIYD+ SGRSRGFGFVTMS+ 
Sbjct: 80  EQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTK 139

Query: 804 KEVDAAVRQFNGYELDGRELRVNSGPAPPKRD-----XXXXXXXXXXXXXXXXXXXXXXX 640
           +EV+AA +QFNGYE+DGR +RVN+GPAP KR+                            
Sbjct: 140 EEVEAAEQQFNGYEIDGRAIRVNAGPAPAKRENSSFGGGRGGNSSYGGGRDGNSSFGGAR 199

Query: 639 XXXXXXXXXRVYVGNLSWGVDDLALQNLFRGQGNVKEARVVYDRESGRSRGFGFVTFSSA 460
                    RVYVGNLSWGVDDLAL+ LF  QGNV +A+VVYDR+SGRSRGFGFVT+SSA
Sbjct: 200 GGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSA 259

Query: 459 QEVNSAIEALDGADLDGRSIRVSPAEERQRRQY 361
           +EVN AI++L+G DLDGRSIRVS AEER RRQ+
Sbjct: 260 KEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQF 292


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  244 bits (624), Expect = 3e-62
 Identities = 128/205 (62%), Positives = 151/205 (73%)
 Frame = -1

Query: 975 TFSADLKVFVGNLPFTADSSTLAGLFGRAGNVEMAEVIYDRDSGRSRGFGFVTMSSAKEV 796
           +FS DLK+FVGNLPF  DS+ LAGLF +AGNVEM EVIYD+ +GRSRGFGFVTMS+ +EV
Sbjct: 85  SFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEV 144

Query: 795 DAAVRQFNGYELDGRELRVNSGPAPPKRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 616
           +AA +QFNGYEL+GR+LRVNSGP PP R                                
Sbjct: 145 EAAAQQFNGYELEGRQLRVNSGP-PPARRENSNFRGENSNFRGENTNFRGPRGGANLNST 203

Query: 615 XRVYVGNLSWGVDDLALQNLFRGQGNVKEARVVYDRESGRSRGFGFVTFSSAQEVNSAIE 436
            R+YVGNLSWGVDDLAL+ LF  QG V EARV+YDRE+GRSRGFGFVT++SA+EVN AIE
Sbjct: 204 NRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIE 263

Query: 435 ALDGADLDGRSIRVSPAEERQRRQY 361
           +LDG DL+GRSIRV+ AE R RRQ+
Sbjct: 264 SLDGVDLNGRSIRVTMAEARPRRQF 288


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  244 bits (622), Expect = 5e-62
 Identities = 129/209 (61%), Positives = 152/209 (72%), Gaps = 1/209 (0%)
 Frame = -1

Query: 984 QQRTFSADLKVFVGNLPFTADSSTLAGLFGRAGNVEMAEVIYDRDSGRSRGFGFVTMSSA 805
           ++++FSADLK+FVGNLPF  DS+ LA LF  AGNVEM EVIYD+ +GRSRGFGFVTMSS 
Sbjct: 83  KEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSV 142

Query: 804 KEVDAAVRQFNGYELDGRELRVNSGPAPPKRDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 625
            EV+AA +QFNGYELDGR LRVN+GP PPKR+                            
Sbjct: 143 SEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGS 202

Query: 624 XXXXRVYVGNLSWGVDDLALQNLFRGQGNVKEARVVYDRESGRSRGFGFVTFSSAQEVNS 445
                VYVGNLSWGVDD+AL++LF  QG V EARV+YDR+SGRS+GFGFVT+ S+QEV +
Sbjct: 203 GNR--VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260

Query: 444 AIEALDGADLDGRSIRVSPAEER-QRRQY 361
           AI++LDGADLDGR IRVS AE R  RRQY
Sbjct: 261 AIKSLDGADLDGRQIRVSEAEARPPRRQY 289


>ref|NP_181259.1| ribonucleoprotein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
           Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
           Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| ribonucleoprotein
           [Arabidopsis thaliana]
          Length = 289

 Score =  244 bits (622), Expect = 5e-62
 Identities = 129/209 (61%), Positives = 152/209 (72%), Gaps = 1/209 (0%)
 Frame = -1

Query: 984 QQRTFSADLKVFVGNLPFTADSSTLAGLFGRAGNVEMAEVIYDRDSGRSRGFGFVTMSSA 805
           ++++FSADLK+FVGNLPF  DS+ LA LF  AGNVEM EVIYD+ +GRSRGFGFVTMSS 
Sbjct: 83  KEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSV 142

Query: 804 KEVDAAVRQFNGYELDGRELRVNSGPAPPKRDXXXXXXXXXXXXXXXXXXXXXXXXXXXX 625
            EV+AA +QFNGYELDGR LRVN+GP PPKR+                            
Sbjct: 143 SEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGS 202

Query: 624 XXXXRVYVGNLSWGVDDLALQNLFRGQGNVKEARVVYDRESGRSRGFGFVTFSSAQEVNS 445
                VYVGNLSWGVDD+AL++LF  QG V EARV+YDR+SGRS+GFGFVT+ S+QEV +
Sbjct: 203 GNR--VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQN 260

Query: 444 AIEALDGADLDGRSIRVSPAEER-QRRQY 361
           AI++LDGADLDGR IRVS AE R  RRQY
Sbjct: 261 AIKSLDGADLDGRQIRVSEAEARPPRRQY 289