BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001818
         (2109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]                110   1e-21
ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853...    93   2e-16
ref|NP_188431.3| DNA-binding protein HMR1-like protein [Arabidop...    90   2e-15
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g...    90   2e-15
ref|XP_002321509.1| high mobility group family [Populus trichoca...    89   6e-15

>gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]
          Length = 546

 Score =  110 bits (275), Expect = 1e-21
 Identities = 70/162 (43%), Positives = 84/162 (51%)
 Frame = +3

Query: 75  PSLPPPQFFTADPNQTSYDEMIMAAISGLREKDGSSRQAIARYIDRVYSNLPSNHSILLT 254
           P  PPP   +  P    Y EMI AAI+ L+E+DGSSR AIA+YIDRVY+NLP NHS LLT
Sbjct: 30  PPQPPPPAPSFSPTHPPYAEMITAAITALKERDGSSRIAIAKYIDRVYTNLPPNHSALLT 89

Query: 255 NHLRNLKNTGQLIMVKHSYLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPASAQYIGP 434
           +HL+ LKN+G L MVKHSY+L                              P SA     
Sbjct: 90  HHLKRLKNSGYLAMVKHSYML---------------------------AGPPGSAPPPPS 122

Query: 435 AQNYSHLTGPNGSVQNVENGPVEASIKRKPGRPPKSPNQAQP 560
           A   S+  G +          V +  KRKPGRPPK   +AQP
Sbjct: 123 ADADSNGVGTD----------VSSLSKRKPGRPPKLKPEAQP 154



 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 40/77 (51%), Positives = 53/77 (68%), Gaps = 5/77 (6%)
 Frame = +3

Query: 1191 LKKARKLSGKPLGRPRKN--SSASEDQSLDIV--NLKNKIDYLQSKIKEALPVIKSSINA 1358
            +K+ RKLSGKPLGRPRKN  S A  D  L +    LK K++++QS+IKEA   +K  +NA
Sbjct: 460  VKRPRKLSGKPLGRPRKNVTSPAVSDPKLVVAYEELKGKLEHMQSRIKEAANALKPCLNA 519

Query: 1359 EEPNV-IGALGQLEELA 1406
            E P + + AL +LEELA
Sbjct: 520  ESPAIALAALQELEELA 536


>ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853898 [Vitis vinifera]
           gi|147815426|emb|CAN74749.1| hypothetical protein
           VITISV_021497 [Vitis vinifera]
           gi|297734307|emb|CBI15554.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score = 93.2 bits (230), Expect = 2e-16
 Identities = 69/212 (32%), Positives = 92/212 (43%)
 Frame = +3

Query: 66  NIDPSLPPPQFFTADPNQTSYDEMIMAAISGLREKDGSSRQAIARYIDRVYSNLPSNHSI 245
           N  PS  PP       N   Y EMI  AI  L E+ GSS++AIA+YI+R + +LP +H  
Sbjct: 30  NPTPSHGPPH------NHPPYAEMITTAIGALNERTGSSKKAIAKYIERTFGDLPPSHPA 83

Query: 246 LLTNHLRNLKNTGQLIMVKHSYLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPASAQY 425
           LLT+HL+ L+++GQ++MVKHSY+L                                    
Sbjct: 84  LLTHHLKRLRSSGQVVMVKHSYMLPR---------------------------------- 109

Query: 426 IGPAQNYSHLTGPNGSVQNVENGPVEASIKRKPGRPPKSPNQAQPISGFAPVEDNGGGAN 605
                     +G +     +  GPV    KR  GRPPK     QP               
Sbjct: 110 ----------SGDDAHALPLHPGPVSGP-KRGRGRPPKPKIPVQP--------------- 143

Query: 606 GSVSESEAMLVSLGLSDGPVPTKMRPRRAIKS 701
                SE++LV++GL DGPV  K  P R  KS
Sbjct: 144 ----TSESVLVAVGLVDGPVVPKRGPGRPPKS 171



 Score = 60.8 bits (146), Expect = 1e-06
 Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 10/90 (11%)
 Frame = +3

Query: 1188 GLKKARKLSGKPLGRPRKN-------SSASEDQSLDIVN---LKNKIDYLQSKIKEALPV 1337
            G K+ +KL+G+P+GRPRK         +ASE    + +N   LK K++++Q KIK ++ V
Sbjct: 255  GPKRPKKLTGRPVGRPRKKLATGEILPAASEQPVAEWMNYEDLKQKLEHIQGKIKLSVGV 314

Query: 1338 IKSSINAEEPNVIGALGQLEELATVDFTAP 1427
            +++  +    + + AL +LE+LAT+D +AP
Sbjct: 315  LRTQFSENNVSAMSALQELEDLATMDISAP 344


>ref|NP_188431.3| DNA-binding protein HMR1-like protein [Arabidopsis thaliana]
           gi|11994210|dbj|BAB01332.1| unnamed protein product
           [Arabidopsis thaliana] gi|27311657|gb|AAO00794.1| linker
           histone protein, putative [Arabidopsis thaliana]
           gi|30387569|gb|AAP31950.1| At3g18035 [Arabidopsis
           thaliana] gi|332642516|gb|AEE76037.1| DNA-binding
           protein HMR1-like protein [Arabidopsis thaliana]
          Length = 480

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 76/243 (31%), Positives = 104/243 (42%), Gaps = 21/243 (8%)
 Frame = +3

Query: 51  YQPHNNIDPSLPPPQFFTADPNQTS----YDEMIMAAISGLREKDGSSRQAIARYIDRVY 218
           +QP       +P PQ F   P+ +     Y EMI AAI+ L E DGSS+ AI+RYI+R Y
Sbjct: 39  FQPQPQTQTQIPQPQMFQLSPHVSMPHPPYSEMICAAIAALNEPDGSSKMAISRYIERCY 98

Query: 219 SNLPSNHSILLTNHLRNLKNTGQLIMVKHSYLLXXXXXXXXXXXXXXXXXXXXXXXXXXX 398
           + L S H+ LLT+HL+ LK +G L MVK SY +                           
Sbjct: 99  TGLTSAHAALLTHHLKTLKTSGVLSMVKKSYKI-------------------------AG 133

Query: 399 XXDPASAQYIGPAQNYSHLTGPNGSVQNVEN------GPVEASIKRKPGRP--PKSPNQA 554
              P ++  +  A     L  P   + +  N      G     +KR  GRP  PK  +Q 
Sbjct: 134 SSTPPASVAVAAAAAAQGLDVPRSEILHSSNNDPMASGSASQPLKRGRGRPPKPKPESQP 193

Query: 555 QPISGFAPVEDNGGGANGSVSESEAMLVSLGLSDGPVPTKM---------RPRRAIKSAA 707
           QP+    P   N   ANG     +  +     S  PVPT +         RPR+    +A
Sbjct: 194 QPLQQLPPT--NQVQANGQPIWEQQQV----QSPVPVPTPVTESAKRGPGRPRK--NGSA 245

Query: 708 APS 716
           AP+
Sbjct: 246 APA 248


>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
           gi|223525178|gb|EEF27887.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 435

 Score = 90.1 bits (222), Expect = 2e-15
 Identities = 69/194 (35%), Positives = 95/194 (48%)
 Frame = +3

Query: 114 NQTSYDEMIMAAISGLREKDGSSRQAIARYIDRVYSNLPSNHSILLTNHLRNLKNTGQLI 293
           N   Y +MI AAI+ L+E+DGSS++AIA+YI+RVY  LP  HS LLT+HL+ LKNTG L+
Sbjct: 68  NHPPYTDMIYAAITALKERDGSSKRAIAKYIERVYPGLPPTHSALLTHHLKRLKNTGLLV 127

Query: 294 MVKHSYLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPASAQYIGPAQNYSHLTGPNGS 473
           MVK SY L                             + +++  I  A  +S L  PN +
Sbjct: 128 MVKKSYKL-----------------PRSDDTVATNNINSSTSNNIN-AVGHSALP-PNPA 168

Query: 474 VQNVENGPVEASIKRKPGRPPKSPNQAQPISGFAPVEDNGGGANGSVSESEAMLVSLGLS 653
           V N  +GP     KR  GRPPK   +  P S   P+         S   + +++V +GLS
Sbjct: 169 VTN--SGP-----KRGRGRPPKPKPEVVP-SSIQPI---------SQPNAASVMVPVGLS 211

Query: 654 DGPVPTKMRPRRAI 695
               P    P   +
Sbjct: 212 ISTQPINSAPAATV 225


>ref|XP_002321509.1| high mobility group family [Populus trichocarpa]
           gi|118481017|gb|ABK92462.1| unknown [Populus
           trichocarpa] gi|118487368|gb|ABK95512.1| unknown
           [Populus trichocarpa] gi|222868505|gb|EEF05636.1| high
           mobility group family [Populus trichocarpa]
          Length = 478

 Score = 88.6 bits (218), Expect = 6e-15
 Identities = 51/105 (48%), Positives = 65/105 (61%), Gaps = 19/105 (18%)
 Frame = +3

Query: 60  HNNIDPSLPPPQFFTADPNQT-------------------SYDEMIMAAISGLREKDGSS 182
           H  + PS PPP   TA P+ T                   SY EMI +AI+ L+E+DGSS
Sbjct: 11  HPPLPPSSPPPPT-TAIPSTTETIPHLAPLPNPAPAVTQPSYAEMIYSAITALKEQDGSS 69

Query: 183 RQAIARYIDRVYSNLPSNHSILLTNHLRNLKNTGQLIMVKHSYLL 317
           R AIA+YI+R Y  LPSNHS LLT+HL+ LKN+G L++ K SY+L
Sbjct: 70  RIAIAKYIERAYPGLPSNHSDLLTHHLKRLKNSGALVLNKKSYML 114



 Score = 58.5 bits (140), Expect = 7e-06
 Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 9/86 (10%)
 Frame = +3

Query: 1197 KARKLSGKPLGRPRKNSS-------ASEDQSLDIV--NLKNKIDYLQSKIKEALPVIKSS 1349
            K +K SG+P+GRPRKN++       ASE Q+   +  +LK K+++ QS++K+A+ V+K  
Sbjct: 341  KPKKSSGRPVGRPRKNANAPWAITRASEPQAQAELHGDLKRKLEFFQSRVKQAIGVLKPH 400

Query: 1350 INAEEPNVIGALGQLEELATVDFTAP 1427
            + +   + + A+ +LE LA++D   P
Sbjct: 401  LTSATISAVAAIQELEGLASMDINVP 426