BLASTX nr result

ID: Lithospermum22_contig00001801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001801
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis ...   124   1e-26
ref|XP_002532053.1| RNA-binding protein, putative [Ricinus commu...   124   1e-26
ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245...   123   3e-26
emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]   123   3e-26
gb|AAK53018.1|AF375434_1 At1g32790 [Arabidopsis thaliana] gi|250...   123   3e-26

>ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
           gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17
           [Arabidopsis thaliana] gi|332193408|gb|AEE31529.1|
           CTC-interacting domain 11 protein [Arabidopsis thaliana]
          Length = 358

 Score =  124 bits (311), Expect = 1e-26
 Identities = 68/105 (64%), Positives = 76/105 (72%)
 Frame = +2

Query: 2   DKKVTQANVRIFFETFCGEVHRLRLLGDYNHSTRIAFVEFVMXXXXXXXXXXXXXXXXXX 181
           DKKVTQ++V+IFFE+FCGEV+RLRLLGDY HSTRIAFVEF                    
Sbjct: 278 DKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEF-------------------- 317

Query: 182 XXXVMAESAIVALSFSGAILGSLPIRVSPSKTPVRPRTAPRSPMH 316
              VMAESAI AL+ SG +LGSLPIRVSPSKTPVRPR +PR PMH
Sbjct: 318 ---VMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR-SPRHPMH 358


>ref|XP_002532053.1| RNA-binding protein, putative [Ricinus communis]
           gi|223528275|gb|EEF30325.1| RNA-binding protein,
           putative [Ricinus communis]
          Length = 385

 Score =  124 bits (311), Expect = 1e-26
 Identities = 68/105 (64%), Positives = 77/105 (73%)
 Frame = +2

Query: 2   DKKVTQANVRIFFETFCGEVHRLRLLGDYNHSTRIAFVEFVMXXXXXXXXXXXXXXXXXX 181
           DKKVTQA+VR+FFE+FCGEV RLRLLGDY+HSTRIAFVEF                    
Sbjct: 305 DKKVTQADVRLFFESFCGEVQRLRLLGDYHHSTRIAFVEF-------------------- 344

Query: 182 XXXVMAESAIVALSFSGAILGSLPIRVSPSKTPVRPRTAPRSPMH 316
               +AESAI+AL+ SGA+LGSLPIRVSPSKTPVRPR  PRSP+H
Sbjct: 345 ---TVAESAILALNCSGAVLGSLPIRVSPSKTPVRPR-IPRSPLH 385


>ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
           gi|302143972|emb|CBI23077.3| unnamed protein product
           [Vitis vinifera]
          Length = 361

 Score =  123 bits (309), Expect = 3e-26
 Identities = 69/105 (65%), Positives = 75/105 (71%)
 Frame = +2

Query: 2   DKKVTQANVRIFFETFCGEVHRLRLLGDYNHSTRIAFVEFVMXXXXXXXXXXXXXXXXXX 181
           DKKVTQA V++FFE+ CGEVHRLRLLGDY+HSTRIAFVEF                    
Sbjct: 281 DKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEF-------------------- 320

Query: 182 XXXVMAESAIVALSFSGAILGSLPIRVSPSKTPVRPRTAPRSPMH 316
              VMAESAI AL+ SGAILGSLPIRVSPSKTPVRPR APR  +H
Sbjct: 321 ---VMAESAIAALNCSGAILGSLPIRVSPSKTPVRPR-APRPALH 361


>emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]
          Length = 195

 Score =  123 bits (309), Expect = 3e-26
 Identities = 69/105 (65%), Positives = 75/105 (71%)
 Frame = +2

Query: 2   DKKVTQANVRIFFETFCGEVHRLRLLGDYNHSTRIAFVEFVMXXXXXXXXXXXXXXXXXX 181
           DKKVTQA V++FFE+ CGEVHRLRLLGDY+HSTRIAFVEF                    
Sbjct: 115 DKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEF-------------------- 154

Query: 182 XXXVMAESAIVALSFSGAILGSLPIRVSPSKTPVRPRTAPRSPMH 316
              VMAESAI AL+ SGAILGSLPIRVSPSKTPVRPR APR  +H
Sbjct: 155 ---VMAESAIAALNCSGAILGSLPIRVSPSKTPVRPR-APRPALH 195


>gb|AAK53018.1|AF375434_1 At1g32790 [Arabidopsis thaliana] gi|25090128|gb|AAN72236.1|
           At1g32790/F6N18_9 [Arabidopsis thaliana]
          Length = 201

 Score =  123 bits (308), Expect = 3e-26
 Identities = 68/105 (64%), Positives = 75/105 (71%)
 Frame = +2

Query: 2   DKKVTQANVRIFFETFCGEVHRLRLLGDYNHSTRIAFVEFVMXXXXXXXXXXXXXXXXXX 181
           DKKVTQ++V+IFFE FCGEV+RLRLLGDY HSTRIAFVEF                    
Sbjct: 121 DKKVTQSDVKIFFEYFCGEVYRLRLLGDYQHSTRIAFVEF-------------------- 160

Query: 182 XXXVMAESAIVALSFSGAILGSLPIRVSPSKTPVRPRTAPRSPMH 316
              VMAESAI AL+ SG +LGSLPIRVSPSKTPVRPR +PR PMH
Sbjct: 161 ---VMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR-SPRHPMH 201


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