BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001761
         (1805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...    74   1e-10
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...    74   1e-10
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...    72   5e-10
ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arab...    69   4e-09
ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana] gi|6...    69   5e-09

>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
            partial [Cucumis sativus]
          Length = 560

 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 71/350 (20%), Positives = 141/350 (40%), Gaps = 24/350 (6%)
 Frame = +3

Query: 111  VFTDSQGNEVLAAIYASDIDVLCPMIQLYGVYDISNADVRLTDRKYQIISNQFQWNLRRH 290
            V TD  G ++ A ++            L  VY +S   +++ ++K++ + N ++  L  +
Sbjct: 155  VLTDEDGTQIQATMFNDAARKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVN 214

Query: 291  TSIRAVPFSR--IPDV------------YKAGFHTADIMGVLIDADEV----KEAKNDRD 416
            + +  V      +P+             +  G    D++GV+ +        ++  N+  
Sbjct: 215  SQVDEVSNEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETA 274

Query: 417  TVQHFTIMNPMKIPFCISVWNEMIPAVGNGLVQAAKNHSVVVAKRLAIKSYRTNXXXXXX 596
              +  TI +  K    IS+WN++   VG  L+  A    ++  K L +            
Sbjct: 275  PKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIALKYLRVG----------- 323

Query: 597  XXXXNMFI*SNVCFNFYEIALSLASKNCLSFAINPPIQAVTDMLSWFNTLLEEEIHHLKT 776
                          +F  ++LS  S++  S  INP I+   D+ SW+++  +       +
Sbjct: 324  --------------DFQGVSLSTISRS--SITINPDIKEAHDLRSWYDSEGKAVSMSSVS 367

Query: 777  EKTSAFTKELVTACRMKTCTLNEVLTNATTGN-----YWIRGLLRLIDDRQQLYYVACSS 941
               S  TK    +      +L+ +L N + G      + IR  +  I   Q ++Y AC +
Sbjct: 368  SGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWYRACKT 427

Query: 942  YFTKIKYDIGYRYTCFFCKK-EVLASLRPLVIMSIADHTNIILVIAIQED 1088
               K+   IG  Y C  C+K +   SLR ++++ ++D +    V    E+
Sbjct: 428  CNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE 477


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
            [Cucumis sativus]
          Length = 603

 Score = 74.3 bits (181), Expect = 1e-10
 Identities = 71/350 (20%), Positives = 141/350 (40%), Gaps = 24/350 (6%)
 Frame = +3

Query: 111  VFTDSQGNEVLAAIYASDIDVLCPMIQLYGVYDISNADVRLTDRKYQIISNQFQWNLRRH 290
            V TD  G ++ A ++            L  VY +S   +++ ++K++ + N ++  L  +
Sbjct: 198  VLTDEDGTQIQATMFNDAARKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVN 257

Query: 291  TSIRAVPFSR--IPDV------------YKAGFHTADIMGVLIDADEV----KEAKNDRD 416
            + +  V      +P+             +  G    D++GV+ +        ++  N+  
Sbjct: 258  SQVDEVSNEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETA 317

Query: 417  TVQHFTIMNPMKIPFCISVWNEMIPAVGNGLVQAAKNHSVVVAKRLAIKSYRTNXXXXXX 596
              +  TI +  K    IS+WN++   VG  L+  A    ++  K L +            
Sbjct: 318  PKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIALKYLRVG----------- 366

Query: 597  XXXXNMFI*SNVCFNFYEIALSLASKNCLSFAINPPIQAVTDMLSWFNTLLEEEIHHLKT 776
                          +F  ++LS  S++  S  INP I+   D+ SW+++  +       +
Sbjct: 367  --------------DFQGVSLSTISRS--SITINPDIKEAHDLRSWYDSEGKAVSMSSVS 410

Query: 777  EKTSAFTKELVTACRMKTCTLNEVLTNATTGN-----YWIRGLLRLIDDRQQLYYVACSS 941
               S  TK    +      +L+ +L N + G      + IR  +  I   Q ++Y AC +
Sbjct: 411  SGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWYRACKT 470

Query: 942  YFTKIKYDIGYRYTCFFCKK-EVLASLRPLVIMSIADHTNIILVIAIQED 1088
               K+   IG  Y C  C+K +   SLR ++++ ++D +    V    E+
Sbjct: 471  CNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE 520


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
            gi|223546255|gb|EEF47757.1| replication factor A 1, rfa1,
            putative [Ricinus communis]
          Length = 622

 Score = 72.0 bits (175), Expect = 5e-10
 Identities = 71/350 (20%), Positives = 140/350 (40%), Gaps = 25/350 (7%)
 Frame = +3

Query: 117  TDSQGNEVLAAIYASDIDVLCPMIQLYGVYDISNADVRLTDRKYQIISNQFQWNLRRHTS 296
            TD  G ++ A ++           QL  VY IS   +++ +++++ + N ++ NL  ++ 
Sbjct: 219  TDEDGTQIQATMFNEAARKFYDKFQLGKVYYISKGSLKVANKQFRTVQNDYEMNLNENSQ 278

Query: 297  IRAVPFSR--IPDVYKAGFHTADIMGVLIDADEV-----------------KEAKNDRDT 419
            +         IP+  K  F   D +G  +  +E+                 +++ ND   
Sbjct: 279  VEEASDEAAFIPET-KFNFVPIDQLGPYVSTNELVDVIGVVQSVSPTMSIRRKSNNDIVP 337

Query: 420  VQHFTIMNPMKIPFCISVWNEMIPAVGNGLVQAAKNHSVVVAKRLAIKSYRTNXXXXXXX 599
             +  TI +  K    +S+WN++   VG  L+  A    VV  K L +             
Sbjct: 338  KRDITIADETKKTVVVSLWNDLATDVGQELLDMADKSPVVAIKALKVG------------ 385

Query: 600  XXXNMFI*SNVCFNFYEIALSLASKNCLSFAINPPIQAVTDMLSWFNTLLEEEIHHLKTE 779
                         +F  ++LS   ++ +   +NP       + SWF++  +E        
Sbjct: 386  -------------DFQGVSLSTLGRSIIQ--VNPDTPESKKLKSWFDSEGKETSLASVGA 430

Query: 780  KTSAFTKELVTACRMKTCTLNEVLTNATTGN-----YWIRGLLRLIDDRQQLYYVACSSY 944
              S  TK    +      +++ + +N + G+     + IR  +  I   Q ++Y AC + 
Sbjct: 431  GLSPSTKSGGGSMYSDRVSISHITSNPSLGSDKPAFFSIRAYISFIKPDQSMWYRACKTC 490

Query: 945  FTKIKYDIGYRYTCFFCKK-EVLASLRPLVIMSIADHTNIILVIAIQEDG 1091
              K+   IG  Y C  C+K +   SLR ++++ ++D +    V A   +G
Sbjct: 491  NKKVTEAIGGGYWCEGCQKNDAECSLRYIMVVKVSDASGEGWVSAFNNEG 540


>ref|XP_002871302.1| hypothetical protein ARALYDRAFT_325405 [Arabidopsis lyrata subsp.
            lyrata] gi|297317139|gb|EFH47561.1| hypothetical protein
            ARALYDRAFT_325405 [Arabidopsis lyrata subsp. lyrata]
          Length = 604

 Score = 68.9 bits (167), Expect = 4e-09
 Identities = 64/338 (18%), Positives = 136/338 (40%), Gaps = 25/338 (7%)
 Frame = +3

Query: 117  TDSQGNEVLAAIYASDIDVLCPMIQLYGVYDISNADVRLTDRKYQIISNQFQWNLRRHTS 296
            TD +G ++ A ++ +         ++  VY IS   ++L +++++ + N ++  L  ++ 
Sbjct: 200  TDEEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSE 259

Query: 297  IRAVPFSRI--PDVYKAGFHTADIMGVLIDADEVKEA---------------KNDRDTV- 422
            +       +  P++ K  F   D +G  ++  ++ +                KND + + 
Sbjct: 260  VEEASNEEMFTPEI-KFNFVPIDELGTYVNQKDLIDVIGVVQCVSPTMSIRRKNDNEMIP 318

Query: 423  -QHFTIMNPMKIPFCISVWNEMIPAVGNGLVQAAKNHSVVVAKRLAIKSYRTNXXXXXXX 599
             +  T+ +  K    +S+WN++   +G  L+  A NH V+  K L +             
Sbjct: 319  KRDITLADESKNTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVG------------ 366

Query: 600  XXXNMFI*SNVCFNFYEIALSLASKNCLSFAINPPIQAVTDMLSWFNTLLEEEIHHLKTE 779
                         +F  ++LS  S++  +  INP       + SW++   +E        
Sbjct: 367  -------------DFQGVSLSTISRS--NVVINPDSPEAKKLKSWYDAEGKETSMSAIGS 411

Query: 780  KTSAFTKELVTACRMKTCTLNEVLTNATTGN-----YWIRGLLRLIDDRQQLYYVACSSY 944
              S+       +       L+ + +N + G      + IR  +  I   Q ++Y AC + 
Sbjct: 412  GMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSIRAYISFIKPDQTMWYRACKTC 471

Query: 945  FTKIKYDIGYRYTCFFC-KKEVLASLRPLVIMSIADHT 1055
              K+   +   Y C  C KK+   SLR ++ + ++D T
Sbjct: 472  NKKVTEAMDSGYWCEGCQKKDQECSLRYIMAVKVSDST 509


>ref|NP_196419.1| RPA70-kDa subunit B [Arabidopsis thaliana] gi|6562316|emb|CAB62614.1|
            replication factor A-like protein [Arabidopsis thaliana]
            gi|332003852|gb|AED91235.1| RPA70-kDa subunit B
            [Arabidopsis thaliana]
          Length = 604

 Score = 68.6 bits (166), Expect = 5e-09
 Identities = 65/349 (18%), Positives = 139/349 (39%), Gaps = 25/349 (7%)
 Frame = +3

Query: 117  TDSQGNEVLAAIYASDIDVLCPMIQLYGVYDISNADVRLTDRKYQIISNQFQWNLRRHTS 296
            TD +G ++ A ++ +         ++  VY IS   ++L +++++ + N ++  L  ++ 
Sbjct: 200  TDEEGTQIQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSE 259

Query: 297  IRAVPFSRI--PDVYKAGFHTADIMGVLIDADEVKEA---------------KNDRDTV- 422
            +       +  P+  K  F   D +G  ++  ++ +                KND + + 
Sbjct: 260  VEEASNEEMFTPET-KFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIP 318

Query: 423  -QHFTIMNPMKIPFCISVWNEMIPAVGNGLVQAAKNHSVVVAKRLAIKSYRTNXXXXXXX 599
             +  T+ +  K    +S+WN++   +G  L+  A NH V+  K L + +           
Sbjct: 319  KRDITLADETKKTVVVSLWNDLATGIGQELLDMADNHPVIAIKSLKVGA----------- 367

Query: 600  XXXNMFI*SNVCFNFYEIALSLASKNCLSFAINPPIQAVTDMLSWFNTLLEEEIHHLKTE 779
                          F  ++LS  S++  +  INP     T + SW++   +E        
Sbjct: 368  --------------FQGVSLSTISRS--NVVINPNSPEATKLKSWYDAEGKETSMSAIGS 411

Query: 780  KTSAFTKELVTACRMKTCTLNEVLTNATTGN-----YWIRGLLRLIDDRQQLYYVACSSY 944
              S+       +       L+ + +N + G      +  R  +  I   Q ++Y AC + 
Sbjct: 412  GMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKPDQTMWYRACKTC 471

Query: 945  FTKIKYDIGYRYTCFFC-KKEVLASLRPLVIMSIADHTNIILVIAIQED 1088
              K+   +   Y C  C KK+   SLR ++ + ++D T    + A  ++
Sbjct: 472  NKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFNDE 520