BLASTX nr result

ID: Lithospermum22_contig00001748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001748
         (4256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26220.3| unnamed protein product [Vitis vinifera]              299   4e-78
ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]           296   2e-77
ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|22...   295   6e-77
emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]   294   2e-76
ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]     285   6e-74

>emb|CBI26220.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  299 bits (766), Expect = 4e-78
 Identities = 179/359 (49%), Positives = 223/359 (62%), Gaps = 5/359 (1%)
 Frame = -2

Query: 4165 MSFTQA-RMQRGPIHGNSRPLRSHYDDMSVAPADN----SYDNYHNNQRANLPYKHYNFS 4001
            MSFTQ  R Q G  H N RP      + + A  ++    SY+ +  ++      K+YN+ 
Sbjct: 1    MSFTQTYRAQGGTFHDNYRPSFIRNKNSNSANINDNRIRSYNPHDFSRNFRERSKNYNY- 59

Query: 4000 SVLPDYNHNSGSWFQPEVVPPPSKKRKFSTNSFEDTRKRNQHCNAYDNGGLNYPITLDNG 3821
                  NH++          P  K+RKFS +++EDT +R Q    YDN            
Sbjct: 60   -----VNHDAA---------PSLKRRKFSASAWEDTGRRYQQQTTYDNA----------- 94

Query: 3820 PHTMPDNYLSQSNHSYDISFTIKNGLLGGAGITWQDPSAHASTSSKRSRSEYEDGGDVVF 3641
            P T                    N L+     T  + +A+ STS KR RS+ ED  D+VF
Sbjct: 95   PSTC-------------------NSLVPAP--TRPNANAYTSTSCKRDRSKLEDD-DMVF 132

Query: 3640 MSRDEIEKRSPSRKDGIDSLHEMHLRYSYCAFLQSLGIRLELPQTTIGTAMVLCHRFFVH 3461
            MSRDEIE+ SPSRKDGID+L EMHLRYSYCAFLQ+LG+RLELPQTTIGTAMVLCHRFFV 
Sbjct: 133  MSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQNLGLRLELPQTTIGTAMVLCHRFFVR 192

Query: 3460 RSHASHDRXXXXXXXXXXXAKSEETARPLNDVLRLSCETFHKQDISLLSYVLPIDWFEQY 3281
            RSHA HDR           AKSEET RPLN+V+R SCE  HK D++ LSY+LP+DWFEQY
Sbjct: 193  RSHACHDRFLIATASLFLAAKSEETQRPLNNVVRASCEILHKLDLTFLSYLLPVDWFEQY 252

Query: 3280 RERITEAEQLILTTLNFELGVQHPYDPLLSTLKKLGYSQSGLVHMALNLVSEGVNRRIS 3104
            RER+ EAEQ+ILTTL+FEL V+HPY PL S L KLG SQ+ LV++AL+LVSEG+  R++
Sbjct: 253  RERVIEAEQMILTTLDFELTVEHPYVPLTSVLNKLGLSQTVLVNLALHLVSEGIYTRLA 311


>ref|XP_002277920.1| PREDICTED: cyclin-T1-4 [Vitis vinifera]
          Length = 363

 Score =  296 bits (759), Expect = 2e-77
 Identities = 178/354 (50%), Positives = 220/354 (62%), Gaps = 5/354 (1%)
 Frame = -2

Query: 4165 MSFTQA-RMQRGPIHGNSRPLRSHYDDMSVAPADN----SYDNYHNNQRANLPYKHYNFS 4001
            MSFTQ  R Q G  H N RP      + + A  ++    SY+ +  ++      K+YN+ 
Sbjct: 1    MSFTQTYRAQGGTFHDNYRPSFIRNKNSNSANINDNRIRSYNPHDFSRNFRERSKNYNY- 59

Query: 4000 SVLPDYNHNSGSWFQPEVVPPPSKKRKFSTNSFEDTRKRNQHCNAYDNGGLNYPITLDNG 3821
                  NH++          P  K+RKFS +++EDT +R Q    YDN            
Sbjct: 60   -----VNHDAA---------PSLKRRKFSASAWEDTGRRYQQQTTYDNA----------- 94

Query: 3820 PHTMPDNYLSQSNHSYDISFTIKNGLLGGAGITWQDPSAHASTSSKRSRSEYEDGGDVVF 3641
            P T                    N L+     T  + +A+ STS KR RS+ ED  D+VF
Sbjct: 95   PSTC-------------------NSLVPAP--TRPNANAYTSTSCKRDRSKLEDD-DMVF 132

Query: 3640 MSRDEIEKRSPSRKDGIDSLHEMHLRYSYCAFLQSLGIRLELPQTTIGTAMVLCHRFFVH 3461
            MSRDEIE+ SPSRKDGID+L EMHLRYSYCAFLQ+LG+RLELPQTTIGTAMVLCHRFFV 
Sbjct: 133  MSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQNLGLRLELPQTTIGTAMVLCHRFFVR 192

Query: 3460 RSHASHDRXXXXXXXXXXXAKSEETARPLNDVLRLSCETFHKQDISLLSYVLPIDWFEQY 3281
            RSHA HDR           AKSEET RPLN+V+R SCE  HK D++ LSY+LP+DWFEQY
Sbjct: 193  RSHACHDRFLIATASLFLAAKSEETQRPLNNVVRASCEILHKLDLTFLSYLLPVDWFEQY 252

Query: 3280 RERITEAEQLILTTLNFELGVQHPYDPLLSTLKKLGYSQSGLVHMALNLVSEGV 3119
            RER+ EAEQ+ILTTL+FEL V+HPY PL S L KLG SQ+ LV++AL+LVSEG+
Sbjct: 253  RERVIEAEQMILTTLDFELTVEHPYVPLTSVLNKLGLSQTVLVNLALHLVSEGL 306



 Score = 65.5 bits (158), Expect = 1e-07
 Identities = 31/58 (53%), Positives = 41/58 (70%)
 Frame = -3

Query: 411 LRSSLWLQFKPHQIXXXXXXXXXXXLNMDLSSYHGVFQEFKTPSSVLKDIEQQLMELF 238
           LRSSLWLQFKPH I           LN+D++SY  ++QEF+T  ++L+D+ QQLMELF
Sbjct: 306 LRSSLWLQFKPHHIAAGAAYLAAKILNLDVASYQYIWQEFQTTPAILQDVAQQLMELF 363


>ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|223543846|gb|EEF45374.1|
            Cyclin-L1, putative [Ricinus communis]
          Length = 403

 Score =  295 bits (756), Expect = 6e-77
 Identities = 167/337 (49%), Positives = 214/337 (63%), Gaps = 1/337 (0%)
 Frame = -2

Query: 4126 HGNSRPLRSHYDDMSVAPADNSYDNYHNNQRANLPYKHYNFSSVLPDY-NHNSGSWFQPE 3950
            +  +R + +H  + +     ++Y NY+ N   N  Y H +FS    D+ +  + ++  P 
Sbjct: 45   NNRNRNINTHRHNSNSTNNTHNY-NYNYNYNNNWNYNH-DFSGKFRDHIDSENNNYVYPP 102

Query: 3949 VVPPPSKKRKFSTNSFEDTRKRNQHCNAYDNGGLNYPITLDNGPHTMPDNYLSQSNHSYD 3770
               P  K+RKFS  ++ED R+                          P +Y S ++ +Y 
Sbjct: 103  NDAPSLKRRKFSAGTWEDVRRE----------------------FVQPVSYESAASSAY- 139

Query: 3769 ISFTIKNGLLGGAGITWQDPSAHASTSSKRSRSEYEDGGDVVFMSRDEIEKRSPSRKDGI 3590
                  N L+    +T  +     STS KR RS+ ED  D VFMSRDEIE+ SPSRKDGI
Sbjct: 140  ------NNLVP---LTRSNAETSTSTSCKRDRSKLEDD-DPVFMSRDEIERHSPSRKDGI 189

Query: 3589 DSLHEMHLRYSYCAFLQSLGIRLELPQTTIGTAMVLCHRFFVHRSHASHDRXXXXXXXXX 3410
            D+L E HLRYSYCAFLQ+LG+RL+LPQTTIGTAMVLCHRFFV RSHA HDR         
Sbjct: 190  DALRESHLRYSYCAFLQNLGVRLDLPQTTIGTAMVLCHRFFVRRSHACHDRFLIATAALF 249

Query: 3409 XXAKSEETARPLNDVLRLSCETFHKQDISLLSYVLPIDWFEQYRERITEAEQLILTTLNF 3230
              +KSEET RPLN++LR S E  HKQD+SLLSY+LP+DWFEQYRER+ EAEQ+ILTTLNF
Sbjct: 250  LASKSEETPRPLNNMLRASSEILHKQDMSLLSYLLPVDWFEQYRERVIEAEQMILTTLNF 309

Query: 3229 ELGVQHPYDPLLSTLKKLGYSQSGLVHMALNLVSEGV 3119
            EL VQHPY PL S L K+G+SQ+ LV++ALNL+SEG+
Sbjct: 310  ELNVQHPYAPLTSVLNKIGFSQTVLVNLALNLISEGL 346



 Score = 65.1 bits (157), Expect = 2e-07
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = -3

Query: 411 LRSSLWLQFKPHQIXXXXXXXXXXXLNMDLSSYHGVFQEFKTPSSVLKDIEQQLMELF 238
           LRSSLWLQFKPH I           LN+DL+ Y  ++QEF+T  ++++D+ QQLMELF
Sbjct: 346 LRSSLWLQFKPHHIAAGAAYLAARFLNLDLACYQNIWQEFQTTPAIIQDVAQQLMELF 403


>emb|CAN71612.1| hypothetical protein VITISV_012971 [Vitis vinifera]
          Length = 443

 Score =  294 bits (752), Expect = 2e-76
 Identities = 176/354 (49%), Positives = 219/354 (61%), Gaps = 5/354 (1%)
 Frame = -2

Query: 4165 MSFTQA-RMQRGPIHGNSRPLRSHYDDMSVAPADN----SYDNYHNNQRANLPYKHYNFS 4001
            MSFTQ  R Q G +H N RP      + + A  ++    SY+ +  ++      K+YN+ 
Sbjct: 1    MSFTQTYRAQGGTLHDNYRPSFIRNKNSNSANINDNRIRSYNPHDFSRNFREXSKNYNY- 59

Query: 4000 SVLPDYNHNSGSWFQPEVVPPPSKKRKFSTNSFEDTRKRNQHCNAYDNGGLNYPITLDNG 3821
                  NH++          P  K+RKFS +++EDT +  Q    YDN            
Sbjct: 60   -----VNHDAA---------PSLKRRKFSASAWEDTGRHYQQQTTYDNA----------- 94

Query: 3820 PHTMPDNYLSQSNHSYDISFTIKNGLLGGAGITWQDPSAHASTSSKRSRSEYEDGGDVVF 3641
            P T                    N L+     T  + +A+ STS KR RS+ ED  D+VF
Sbjct: 95   PSTC-------------------NSLVPAP--TRPNANAYTSTSCKRDRSKLEDD-DMVF 132

Query: 3640 MSRDEIEKRSPSRKDGIDSLHEMHLRYSYCAFLQSLGIRLELPQTTIGTAMVLCHRFFVH 3461
            MSRDEIE+ SPSRKDGID+L EMHLRYSYCAFLQ+LG+RLE PQTTIGTAMVLCHRFFV 
Sbjct: 133  MSRDEIERCSPSRKDGIDALREMHLRYSYCAFLQNLGLRLEXPQTTIGTAMVLCHRFFVR 192

Query: 3460 RSHASHDRXXXXXXXXXXXAKSEETARPLNDVLRLSCETFHKQDISLLSYVLPIDWFEQY 3281
            RSHA HDR           AKSEET RPLN+V+R SCE  HK D++ LSY+LP+DWFEQY
Sbjct: 193  RSHACHDRFLIATASLFLAAKSEETQRPLNNVVRASCEILHKLDLTFLSYLLPVDWFEQY 252

Query: 3280 RERITEAEQLILTTLNFELGVQHPYDPLLSTLKKLGYSQSGLVHMALNLVSEGV 3119
            RER+ EAEQ+ILTTL+FEL V+HPY PL S L KLG SQ+ LV++AL+LVSEG+
Sbjct: 253  RERVIEAEQMILTTLDFELTVEHPYVPLTSVLNKLGLSQTVLVNLALHLVSEGL 306


>ref|XP_004140152.1| PREDICTED: cyclin-T1-4-like [Cucumis sativus]
          Length = 378

 Score =  285 bits (730), Expect = 6e-74
 Identities = 169/332 (50%), Positives = 205/332 (61%), Gaps = 3/332 (0%)
 Frame = -2

Query: 4105 RSHYDDMSVAPADNSYD---NYHNNQRANLPYKHYNFSSVLPDYNHNSGSWFQPEVVPPP 3935
            RS Y D       N ++    Y N    ++  +  N +S  P   HNS S+         
Sbjct: 36   RSSYYDYGYGYGSNHFEFLGQYKNQVGRSIYARPDNLNSTKP---HNSQSF--------- 83

Query: 3934 SKKRKFSTNSFEDTRKRNQHCNAYDNGGLNYPITLDNGPHTMPDNYLSQSNHSYDISFTI 3755
             K+RKFS + +ED+ + +     YDNG    P    N  H  P     +SN+  D+S   
Sbjct: 84   -KRRKFSASRWEDSGRYHWQGRTYDNG----PSIYSNLVHPPP-----RSNN--DVS--- 128

Query: 3754 KNGLLGGAGITWQDPSAHASTSSKRSRSEYEDGGDVVFMSRDEIEKRSPSRKDGIDSLHE 3575
                               S S KR R   ED  +  FMSRDEIE+ SPSRKDGID++ E
Sbjct: 129  ------------------TSASCKRDRRIMEDD-EPFFMSRDEIERCSPSRKDGIDTIRE 169

Query: 3574 MHLRYSYCAFLQSLGIRLELPQTTIGTAMVLCHRFFVHRSHASHDRXXXXXXXXXXXAKS 3395
             HLRY+YCAFLQSLG++LELPQTTIGTAM+LCHRFFV RSHA HDR           AKS
Sbjct: 170  THLRYTYCAFLQSLGLQLELPQTTIGTAMILCHRFFVRRSHACHDRFLIATSALFLAAKS 229

Query: 3394 EETARPLNDVLRLSCETFHKQDISLLSYVLPIDWFEQYRERITEAEQLILTTLNFELGVQ 3215
            EET RPLN+VLR SCE  HKQD ++LSY+LP+DWFEQYRER+TEAEQLILTTLNFEL VQ
Sbjct: 230  EETPRPLNNVLRASCEILHKQDFNVLSYMLPVDWFEQYRERVTEAEQLILTTLNFELNVQ 289

Query: 3214 HPYDPLLSTLKKLGYSQSGLVHMALNLVSEGV 3119
            HPY PL+S L K+G SQS LV++ALNL+SEG+
Sbjct: 290  HPYAPLMSVLNKIGLSQSILVNLALNLISEGL 321



 Score = 62.0 bits (149), Expect = 1e-06
 Identities = 30/58 (51%), Positives = 37/58 (63%)
 Frame = -3

Query: 411 LRSSLWLQFKPHQIXXXXXXXXXXXLNMDLSSYHGVFQEFKTPSSVLKDIEQQLMELF 238
           LRSSLWLQFKP QI           LNMD + Y  + QEF+   ++L+D+ QQLMELF
Sbjct: 321 LRSSLWLQFKPQQIAAGAAYLSAKLLNMDFAPYQNILQEFQATPAILQDVAQQLMELF 378


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