BLASTX nr result

ID: Lithospermum22_contig00001649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001649
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516980.1| PREDICTED: 40S ribosomal protein S4-like [Gl...   461   e-127
ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cu...   460   e-127
ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22...   460   e-127
ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus ...   459   e-127
ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [...   459   e-127

>ref|XP_003516980.1| PREDICTED: 40S ribosomal protein S4-like [Glycine max]
          Length = 264

 Score =  461 bits (1186), Expect = e-127
 Identities = 226/256 (88%), Positives = 234/256 (91%)
 Frame = +3

Query: 6   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 185
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 186 SIAILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSIRDEESK 365
            IAILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEESK
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEESK 120

Query: 366 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKYDLESNKIVDFIKFDXXXX 545
           FKLCKVRSVQFG+KGIPY+NTYDGRTIRYPDPLIKANDTIK DLESNKI DFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 546 XXXXXXXXXXXXXXIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGSKPWVSLPK 725
                         IKNREKHKGSFETIHVQD+TGHEFATR+GNV+ IGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFIIGKGTKPWVSLPK 240

Query: 726 GKGIKLSIIEEARKRL 773
           GKGIKLSIIEEARKRL
Sbjct: 241 GKGIKLSIIEEARKRL 256


>ref|XP_004150395.1| PREDICTED: 40S ribosomal protein S4-like [Cucumis sativus]
           gi|449496881|ref|XP_004160252.1| PREDICTED: 40S
           ribosomal protein S4-like [Cucumis sativus]
          Length = 264

 Score =  460 bits (1183), Expect = e-127
 Identities = 224/256 (87%), Positives = 235/256 (91%)
 Frame = +3

Query: 6   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 185
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 186 SIAILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSIRDEESK 365
            IAILMQRHVLVDGKVRTDKT+PAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RDEE+K
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAK 120

Query: 366 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKYDLESNKIVDFIKFDXXXX 545
           +KLCKVRSVQFG+KGIPY+NTYDGRTIRYPDPLIKANDTIK DLESNKI DFIKFD    
Sbjct: 121 YKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNV 180

Query: 546 XXXXXXXXXXXXXXIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGSKPWVSLPK 725
                         IKNREKHKGSFETIH+QD+TGHEFATRLGNV+TIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPK 240

Query: 726 GKGIKLSIIEEARKRL 773
           GKGIKLSIIEEARKRL
Sbjct: 241 GKGIKLSIIEEARKRL 256


>ref|NP_001235826.1| 40S ribosomal S4 protein [Glycine max] gi|22138108|gb|AAM93434.1|
           40S ribosomal S4 protein [Glycine max]
           gi|255641970|gb|ACU21252.1| unknown [Glycine max]
          Length = 264

 Score =  460 bits (1183), Expect = e-127
 Identities = 223/256 (87%), Positives = 235/256 (91%)
 Frame = +3

Query: 6   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 185
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 186 SIAILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSIRDEESK 365
            IAILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RD+E+K
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 366 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKYDLESNKIVDFIKFDXXXX 545
           FKLCKVRSVQFG+KGIPY+NTYDGRTIRYPDPLI+ANDTIK DLE NKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 546 XXXXXXXXXXXXXXIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGSKPWVSLPK 725
                         IKNREKHKGSFETIHVQDSTGHEFATR+GNV+TIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDSTGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 726 GKGIKLSIIEEARKRL 773
           GKGIKLSIIEEARKR+
Sbjct: 241 GKGIKLSIIEEARKRI 256


>ref|XP_002515668.1| 40S ribosomal protein S4, putative [Ricinus communis]
           gi|223545211|gb|EEF46720.1| 40S ribosomal protein S4,
           putative [Ricinus communis]
          Length = 263

 Score =  459 bits (1181), Expect = e-127
 Identities = 225/256 (87%), Positives = 234/256 (91%)
 Frame = +3

Query: 6   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 185
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 186 SIAILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSIRDEESK 365
            IAILMQRHVLVD KVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHSIRD+E+K
Sbjct: 61  VIAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIRDDEAK 120

Query: 366 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKYDLESNKIVDFIKFDXXXX 545
           FKLCKVRSVQFG+KGIPY+NTYDGRTIRYPDPLIKANDTIK DLESNKI DFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKITDFIKFDVGNV 180

Query: 546 XXXXXXXXXXXXXXIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGSKPWVSLPK 725
                         IKNREKHKGSFETIHVQD+TGHEFATR+GNV+TIGKG+KPWVSLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWVSLPK 240

Query: 726 GKGIKLSIIEEARKRL 773
           GKGIKLSIIEEARKRL
Sbjct: 241 GKGIKLSIIEEARKRL 256


>ref|XP_003547932.1| PREDICTED: 40S ribosomal protein S4-1-like [Glycine max]
          Length = 264

 Score =  459 bits (1180), Expect = e-127
 Identities = 222/256 (86%), Positives = 235/256 (91%)
 Frame = +3

Query: 6   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 185
           MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE
Sbjct: 1   MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYRE 60

Query: 186 SIAILMQRHVLVDGKVRTDKTYPAGFMDVISIPKTNENFRLLYDTKGRFRLHSIRDEESK 365
            IAILMQRHVLVDGKVRTDKTYPAGFMDV+SIPKTNENFRLLYDTKGRFRLHS+RD+E+K
Sbjct: 61  VIAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAK 120

Query: 366 FKLCKVRSVQFGKKGIPYINTYDGRTIRYPDPLIKANDTIKYDLESNKIVDFIKFDXXXX 545
           FKLCKVRSVQFG+KGIPY+NTYDGRTIRYPDPLI+ANDTIK DLE NKIVDFIKFD    
Sbjct: 121 FKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRANDTIKLDLEENKIVDFIKFDVGNV 180

Query: 546 XXXXXXXXXXXXXXIKNREKHKGSFETIHVQDSTGHEFATRLGNVYTIGKGSKPWVSLPK 725
                         IKNREKHKGSFETIHVQD+TGHEFATR+GNV+TIGKG+KPW+SLPK
Sbjct: 181 VMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGTKPWISLPK 240

Query: 726 GKGIKLSIIEEARKRL 773
           GKGIKLSIIEEARKR+
Sbjct: 241 GKGIKLSIIEEARKRI 256


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