BLASTX nr result

ID: Lithospermum22_contig00001620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001620
         (1916 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN95985.1| G-strand specific single-stranded telomere-bindin...   124   9e-26
gb|ADN95984.1| G-strand specific single-stranded telomere-bindin...   122   4e-25
gb|ADN95983.1| G-strand specific single-stranded telomere-bindin...   119   3e-24
ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, ...   109   2e-21
ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleop...   103   2e-19

>gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
            [Nicotiana tabacum]
          Length = 339

 Score =  124 bits (311), Expect = 9e-26
 Identities = 64/106 (60%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
 Frame = -2

Query: 1915 DMNGNQVEIKKAEPKKPSNPAPGPAYASNSRGRGYSDRFGGY-DSYNSYGRGGFGPAPYR 1739
            DM G QVEIKKAEPKKPSNPA  PAY S+SRGRGY D +GG+ +SY+ +G GGFGPA YR
Sbjct: 168  DMMGTQVEIKKAEPKKPSNPASAPAYGSDSRGRGYGDSYGGFGNSYSGFGSGGFGPASYR 227

Query: 1738 SXXXXXXXXXXXXXXGVSGGDYDGRYNDFSG-DYVGYRGEPSLGYS 1604
            S              G  GG++ GRY DF G D+ GYRG+PSLGYS
Sbjct: 228  S------FGARFGEYGYGGGEFGGRYGDFGGSDFGGYRGDPSLGYS 267


>gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
            [Nicotiana tabacum]
          Length = 337

 Score =  122 bits (305), Expect = 4e-25
 Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 2/106 (1%)
 Frame = -2

Query: 1915 DMNGNQVEIKKAEPKKPSNPAPGPAYASNSRGRGYSDRFGGY-DSYNSYGRGGFGPAPYR 1739
            DM G QVEIKKAEPKKPSNPA  PAY S+SRGRGY D +GG+ +SY+ +G G FGPA YR
Sbjct: 168  DMMGTQVEIKKAEPKKPSNPASAPAYGSDSRGRGYGDSYGGFGNSYSGFGSGSFGPASYR 227

Query: 1738 SXXXXXXXXXXXXXXGVSGGDYDGRYNDFSG-DYVGYRGEPSLGYS 1604
            S              G  GG++ GRY DF G D+ GYRG+PSLGYS
Sbjct: 228  S------FGARFGEYGYGGGEFGGRYGDFGGSDFGGYRGDPSLGYS 267


>gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
            [Nicotiana tabacum]
          Length = 346

 Score =  119 bits (298), Expect = 3e-24
 Identities = 65/107 (60%), Positives = 74/107 (69%), Gaps = 3/107 (2%)
 Frame = -2

Query: 1915 DMNGNQVEIKKAEPKKPSNPA-PGPAYASNSRGRGYSDRFGGY-DSYNSYGRGGFGPAPY 1742
            DM G QVEIKKAEPKKPSNPA  G  Y S SRGRGYSD +GG+ +SY+S+G GGFGPA Y
Sbjct: 168  DMLGTQVEIKKAEPKKPSNPASSGHGYGSESRGRGYSDSYGGFGNSYSSFGSGGFGPASY 227

Query: 1741 RSXXXXXXXXXXXXXXGVSGGDYDGRYNDF-SGDYVGYRGEPSLGYS 1604
            RS              G  GG+Y GRY DF  G++ GYRG+PSLGYS
Sbjct: 228  RS---SGGMGGRFGDYGYGGGEYGGRYGDFGGGEFGGYRGDPSLGYS 271


>ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
            communis] gi|223538031|gb|EEF39644.1| Heterogeneous
            nuclear ribonucleoprotein A1, putative [Ricinus communis]
          Length = 348

 Score =  109 bits (273), Expect = 2e-21
 Identities = 59/107 (55%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
 Frame = -2

Query: 1915 DMNGNQVEIKKAEPKKPSNPAPGPAYASNSRGRGYSDRFGGYDSYNSYG--RGGFGPAPY 1742
            DM G QVEIKKAEPKK SNP P P+Y SNSRGR Y+D +GG+    SYG   GGFGP PY
Sbjct: 172  DMAGTQVEIKKAEPKKASNPPPAPSYGSNSRGRSYNDSYGGFG--GSYGGFDGGFGPGPY 229

Query: 1741 RSXXXXXXXXXXXXXXGVSGGDYDGRYNDFSGDYV-GYRGEPSLGYS 1604
            R+              G  GGD+ G Y  F G  + GYRGE SLGYS
Sbjct: 230  RTPGSLGGRLSSAYGYGSGGGDFGGSYGSFGGSSLGGYRGESSLGYS 276


>ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
            vinifera] gi|147768836|emb|CAN78130.1| hypothetical
            protein VITISV_036088 [Vitis vinifera]
          Length = 348

 Score =  103 bits (256), Expect = 2e-19
 Identities = 59/107 (55%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
 Frame = -2

Query: 1915 DMNGNQVEIKKAEPKKPSNPAPGPAYASNSRGRGYSDRFGGYDSYNSYG--RGGFGPAPY 1742
            DM G QVEIKKAEPKK SNP P PAY SNSR R +SD FGG+ S  SYG    GFGP PY
Sbjct: 172  DMAGTQVEIKKAEPKKASNPPPAPAYGSNSRARSFSDGFGGFGS--SYGGFDSGFGPGPY 229

Query: 1741 RSXXXXXXXXXXXXXXGVSGGDYDGRYNDF-SGDYVGYRGEPSLGYS 1604
            R+              G SG ++ G Y  F S    GYRGE SLGYS
Sbjct: 230  RTPGGVGGRLGGYGGYGSSGSEFGGGYGGFGSSSLGGYRGESSLGYS 276


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