BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001609
         (1569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q42967.1|DCUP_TOBAC RecName: Full=Uroporphyrinogen decarboxyl...   639   0.0  
ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, c...   630   e-178
pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Mode...   626   e-177
ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ri...   622   e-175
gb|AFK49509.1| unknown [Lotus japonicus]                              619   e-175

>sp|Q42967.1|DCUP_TOBAC RecName: Full=Uroporphyrinogen decarboxylase, chloroplastic;
            Short=UPD; Short=URO-D; Flags: Precursor
            gi|1009429|emb|CAA58040.1| uroporphyrinogen decarboxylase
            [Nicotiana tabacum]
          Length = 391

 Score =  639 bits (1649), Expect = 0.0
 Identities = 321/397 (80%), Positives = 348/397 (87%)
 Frame = -1

Query: 1338 NFNTKNNIPTIYCSAGGAVAEPKIVNATEPLLLDAVRGKNVERPPVWLMRQAGRYMKSYQ 1159
            NFN    +  I CSAGG VAEPK +NAT+PLLLDAVRGK VERPPVWLMRQAGRYMKSYQ
Sbjct: 24   NFNLNPRL--ICCSAGGTVAEPKAINATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQ 81

Query: 1158 NLCERHPSFRERSENVDLVVEISLQPWKVFRPDGVXXXXXXXXXXXXXXXXXXXXXXXXX 979
             LCE++P FR+RSENVDLVVEISLQPWKVFRPDGV                         
Sbjct: 82   LLCEKYPLFRDRSENVDLVVEISLQPWKVFRPDGV------------------------- 116

Query: 978  XVILFSDILTPLTGMNIPFDIVKGKGPIIFDPIGTAADVDQVTEFVPEESVPYVGEALTI 799
              ILFSDILTPL+GMNIPFDI+KGKGP+IFDP+ TAADV++V EF+PE+SVPYVGEALTI
Sbjct: 117  --ILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTI 174

Query: 798  LRKEVNNEAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFSQPKVLHALLAKFASSMT 619
            LRKEVNN+AAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAF++PKVLHALL KFA+SM 
Sbjct: 175  LRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMA 234

Query: 618  KYIRYQADKGAQAVQIFDSWATELSPTDFEEFSLPYLKQIVDSVRKTHPTLPLILYASGS 439
            KYIRYQAD GAQAVQIFDSWATELSP DFEEFSLPYLKQIVDSV+ THP LPLILYASGS
Sbjct: 235  KYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGS 294

Query: 438  GGLLERLAMTGVDVVSLDWTVDMAEGRKRLGPDVAVQGNVDPGVLFGSKEFITNRIHDTV 259
            GGLLERL +TGVDVVSLDWTVDMA+GR+RLGP+VA+QGNVDPGVLFGSKEFITNRI+DTV
Sbjct: 295  GGLLERLPLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTV 354

Query: 258  RKAGKGKHILNLGHGIKVGTPEENVAHFFEVAKGLRY 148
            +KAGKGKHILNLGHGIKVGTPEEN AHFFE+AKGLRY
Sbjct: 355  KKAGKGKHILNLGHGIKVGTPEENFAHFFEIAKGLRY 391


>ref|XP_002274385.2| PREDICTED: uroporphyrinogen decarboxylase, chloroplastic-like [Vitis
            vinifera] gi|297736517|emb|CBI25388.3| unnamed protein
            product [Vitis vinifera]
          Length = 392

 Score =  630 bits (1626), Expect = e-178
 Identities = 316/392 (80%), Positives = 345/392 (88%)
 Frame = -1

Query: 1323 NNIPTIYCSAGGAVAEPKIVNATEPLLLDAVRGKNVERPPVWLMRQAGRYMKSYQNLCER 1144
            N+ P IYC+ GG VAEP I+NATEPLLL AVRG++VERPPVWLMRQAGRYMKSYQ +CE+
Sbjct: 28   NSKPRIYCALGGTVAEPIIINATEPLLLTAVRGEDVERPPVWLMRQAGRYMKSYQIICEK 87

Query: 1143 HPSFRERSENVDLVVEISLQPWKVFRPDGVXXXXXXXXXXXXXXXXXXXXXXXXXXVILF 964
            +PSFRERSENVDLVVEISLQPWKVF+PDGV                           ILF
Sbjct: 88   YPSFRERSENVDLVVEISLQPWKVFKPDGV---------------------------ILF 120

Query: 963  SDILTPLTGMNIPFDIVKGKGPIIFDPIGTAADVDQVTEFVPEESVPYVGEALTILRKEV 784
            SDILTPL+GMNIPFDI+KGKGP+IF+P+ TA DV+QV EFVPE+SVPYVGEALTILRKEV
Sbjct: 121  SDILTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREFVPEDSVPYVGEALTILRKEV 180

Query: 783  NNEAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFSQPKVLHALLAKFASSMTKYIRY 604
            +N AAVLGFVGAPFTLASYVVEGGSSK+F+KIKRLAFSQPKVLHALL KF +SM KYI+Y
Sbjct: 181  DNAAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLQKFTTSMAKYIQY 240

Query: 603  QADKGAQAVQIFDSWATELSPTDFEEFSLPYLKQIVDSVRKTHPTLPLILYASGSGGLLE 424
            QAD GAQAVQIFDSWATELSP DFEEFSLPYLKQIVDSV++THP LPLILYASGSGGLLE
Sbjct: 241  QADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKQTHPNLPLILYASGSGGLLE 300

Query: 423  RLAMTGVDVVSLDWTVDMAEGRKRLGPDVAVQGNVDPGVLFGSKEFITNRIHDTVRKAGK 244
            RL +TGVDVVSLDWTVDMAEGR+RLG DVAVQGN+DPGVLFGSKEFITNRI+DTVRKAGK
Sbjct: 301  RLPLTGVDVVSLDWTVDMAEGRRRLGTDVAVQGNIDPGVLFGSKEFITNRINDTVRKAGK 360

Query: 243  GKHILNLGHGIKVGTPEENVAHFFEVAKGLRY 148
            GKHILNLGHGI VGTPEENVAHFFEVA+G+RY
Sbjct: 361  GKHILNLGHGIVVGTPEENVAHFFEVARGIRY 392


>pdb|1J93|A Chain A, Crystal Structure And Substrate Binding Modeling Of The
            Uroporphyrinogen-Iii Decarboxylase From Nicotiana
            Tabacum: Implications For The Catalytic Mechanism
          Length = 353

 Score =  626 bits (1614), Expect = e-177
 Identities = 312/379 (82%), Positives = 338/379 (89%)
 Frame = -1

Query: 1284 VAEPKIVNATEPLLLDAVRGKNVERPPVWLMRQAGRYMKSYQNLCERHPSFRERSENVDL 1105
            VAEPK +NAT+PLLLDAVRGK VERPPVWLMRQAGRYMKSYQ LCE++P FR+RSENVDL
Sbjct: 2    VAEPKAINATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDL 61

Query: 1104 VVEISLQPWKVFRPDGVXXXXXXXXXXXXXXXXXXXXXXXXXXVILFSDILTPLTGMNIP 925
            VVEISLQPWKVFRPDGV                           ILFSDILTPL+GMNIP
Sbjct: 62   VVEISLQPWKVFRPDGV---------------------------ILFSDILTPLSGMNIP 94

Query: 924  FDIVKGKGPIIFDPIGTAADVDQVTEFVPEESVPYVGEALTILRKEVNNEAAVLGFVGAP 745
            FDI+KGKGP+IFDP+ TAADV++V EF+PE+SVPYVGEALTILRKEVNN+AAVLGFVGAP
Sbjct: 95   FDIIKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTILRKEVNNQAAVLGFVGAP 154

Query: 744  FTLASYVVEGGSSKNFTKIKRLAFSQPKVLHALLAKFASSMTKYIRYQADKGAQAVQIFD 565
            FTLASYVVEGGSSKNFTKIKRLAF++PKVLHALL KFA+SM KYIRYQAD GAQAVQIFD
Sbjct: 155  FTLASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQIFD 214

Query: 564  SWATELSPTDFEEFSLPYLKQIVDSVRKTHPTLPLILYASGSGGLLERLAMTGVDVVSLD 385
            SWATELSP DFEEFSLPYLKQIVDSV+ THP LPLILYASGSGGLLERL +TGVDVVSLD
Sbjct: 215  SWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSGGLLERLPLTGVDVVSLD 274

Query: 384  WTVDMAEGRKRLGPDVAVQGNVDPGVLFGSKEFITNRIHDTVRKAGKGKHILNLGHGIKV 205
            WTVDMA+GR+RLGP+VA+QGNVDPGVLFGSKEFITNRI+DTV+KAGKGKHILNLGHGIKV
Sbjct: 275  WTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKGKHILNLGHGIKV 334

Query: 204  GTPEENVAHFFEVAKGLRY 148
            GTPEEN AHFFE+AKGLRY
Sbjct: 335  GTPEENFAHFFEIAKGLRY 353


>ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative [Ricinus communis]
            gi|223539973|gb|EEF41551.1| uroporphyrinogen
            decarboxylase, putative [Ricinus communis]
          Length = 389

 Score =  622 bits (1603), Expect = e-175
 Identities = 312/389 (80%), Positives = 341/389 (87%)
 Frame = -1

Query: 1314 PTIYCSAGGAVAEPKIVNATEPLLLDAVRGKNVERPPVWLMRQAGRYMKSYQNLCERHPS 1135
            P I+CS  G VAEPK  +  EPLLL+AVRG++VERPPVWLMRQAGRYMKSYQ +CE++PS
Sbjct: 28   PIIHCSLPGTVAEPKPASVAEPLLLNAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPS 87

Query: 1134 FRERSENVDLVVEISLQPWKVFRPDGVXXXXXXXXXXXXXXXXXXXXXXXXXXVILFSDI 955
            FRERSENVDLVVEISLQPW VF+PDGV                           ILFSDI
Sbjct: 88   FRERSENVDLVVEISLQPWNVFKPDGV---------------------------ILFSDI 120

Query: 954  LTPLTGMNIPFDIVKGKGPIIFDPIGTAADVDQVTEFVPEESVPYVGEALTILRKEVNNE 775
            LTPL+GMNIPFDIVKGKGPIIF+P+ TA DVDQV EFVPEESVPYVGE+LTILRKEV+N+
Sbjct: 121  LTPLSGMNIPFDIVKGKGPIIFNPLRTAEDVDQVREFVPEESVPYVGESLTILRKEVDNK 180

Query: 774  AAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFSQPKVLHALLAKFASSMTKYIRYQAD 595
            AAVLGFVGAPFTLASY VEGGSSK+F+KIKRLAFSQP+VLHALL KFA+SM KY++YQAD
Sbjct: 181  AAVLGFVGAPFTLASYCVEGGSSKHFSKIKRLAFSQPEVLHALLQKFATSMAKYVQYQAD 240

Query: 594  KGAQAVQIFDSWATELSPTDFEEFSLPYLKQIVDSVRKTHPTLPLILYASGSGGLLERLA 415
             GAQAVQIFDSWATELSP DFE+FSLPYLKQIVD+V+KTHP LPLILYASGSGGLLERLA
Sbjct: 241  NGAQAVQIFDSWATELSPVDFEQFSLPYLKQIVDTVKKTHPNLPLILYASGSGGLLERLA 300

Query: 414  MTGVDVVSLDWTVDMAEGRKRLGPDVAVQGNVDPGVLFGSKEFITNRIHDTVRKAGKGKH 235
            +TGVDVVSLDWTVDMAEGR+RLGPD+AVQGNVDPGVLFGSKEFITNRI+D VRKAGKGKH
Sbjct: 301  LTGVDVVSLDWTVDMAEGRRRLGPDMAVQGNVDPGVLFGSKEFITNRINDVVRKAGKGKH 360

Query: 234  ILNLGHGIKVGTPEENVAHFFEVAKGLRY 148
            ILNLGHGI VGTPEENVAHFFEVAKG+RY
Sbjct: 361  ILNLGHGIVVGTPEENVAHFFEVAKGIRY 389


>gb|AFK49509.1| unknown [Lotus japonicus]
          Length = 390

 Score =  619 bits (1597), Expect = e-175
 Identities = 310/392 (79%), Positives = 341/392 (86%)
 Frame = -1

Query: 1323 NNIPTIYCSAGGAVAEPKIVNATEPLLLDAVRGKNVERPPVWLMRQAGRYMKSYQNLCER 1144
            N+   I C+  G VAEPK+  A EPLLL+AVRG +VERPPVWLMRQAGRYMKSYQ +CE+
Sbjct: 26   NSRNPISCTLPGTVAEPKLTAAAEPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQTICEK 85

Query: 1143 HPSFRERSENVDLVVEISLQPWKVFRPDGVXXXXXXXXXXXXXXXXXXXXXXXXXXVILF 964
            HPSFRERSENVDLVVEISLQPWKVF+PDGV                           ILF
Sbjct: 86   HPSFRERSENVDLVVEISLQPWKVFKPDGV---------------------------ILF 118

Query: 963  SDILTPLTGMNIPFDIVKGKGPIIFDPIGTAADVDQVTEFVPEESVPYVGEALTILRKEV 784
            SDILTPL+GMNIPFDIVKGKGP+IFDPI +AA VDQVTEF+P+ SVPYVGEALTILRKEV
Sbjct: 119  SDILTPLSGMNIPFDIVKGKGPVIFDPIHSAAQVDQVTEFIPQGSVPYVGEALTILRKEV 178

Query: 783  NNEAAVLGFVGAPFTLASYVVEGGSSKNFTKIKRLAFSQPKVLHALLAKFASSMTKYIRY 604
            +N+AAVLGFVGAPFTLASYVVEGGSSK+F+KIKRLAFSQPKVLH+LL KF +SM +YI+Y
Sbjct: 179  DNKAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHSLLQKFTTSMARYIQY 238

Query: 603  QADKGAQAVQIFDSWATELSPTDFEEFSLPYLKQIVDSVRKTHPTLPLILYASGSGGLLE 424
            QAD GAQAVQIFDSWATELSP DFEEFSLPYLKQIVD+V+KTHP LPLILYASGSGGLLE
Sbjct: 239  QADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKKTHPELPLILYASGSGGLLE 298

Query: 423  RLAMTGVDVVSLDWTVDMAEGRKRLGPDVAVQGNVDPGVLFGSKEFITNRIHDTVRKAGK 244
            RLA+TGVDVVSLDWTVDMA+GR+RLGP++ VQGNVDPGVLFGSKE IT+RIHDTVRKAG+
Sbjct: 299  RLALTGVDVVSLDWTVDMADGRRRLGPNITVQGNVDPGVLFGSKEIITDRIHDTVRKAGR 358

Query: 243  GKHILNLGHGIKVGTPEENVAHFFEVAKGLRY 148
            GKHILNLGHGI VGTPEENVAHFFEVAKG+RY
Sbjct: 359  GKHILNLGHGIVVGTPEENVAHFFEVAKGIRY 390