BLASTX nr result
ID: Lithospermum22_contig00001606
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lithospermum22_contig00001606
(693 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|2... 276 2e-72
ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containi... 273 3e-71
emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera] 273 3e-71
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,... 264 1e-68
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 260 2e-67
>ref|XP_002324235.1| predicted protein [Populus trichocarpa] gi|222865669|gb|EEF02800.1|
predicted protein [Populus trichocarpa]
Length = 736
Score = 276 bits (707), Expect = 2e-72
Identities = 133/232 (57%), Positives = 173/232 (74%), Gaps = 2/232 (0%)
Frame = -2
Query: 692 SPPYTLLQTHPSLSLLARCKNVETIKQVHSQFIKFGLHNTQFALTKLIEFCAIGD--DLP 519
SPPY L+ HPSL+LL+ CK ++T+KQ+HSQ IK GLHNT FAL+KLIEFCA+ DL
Sbjct: 20 SPPYKLVHDHPSLTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLS 79
Query: 518 YASAIFHSIENPNHIAYNMLIRGVSLSSWPNLGIDYFVKMLWNGIQPNSYTFPFVFXXXX 339
YA ++F +I NPNH+ +N +IRG+S S P L ++Y+V M+ +G +PN YTFP +F
Sbjct: 80 YALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCT 139
Query: 338 XXXXXXXGRQVHGHVMKFGLQDDVFVHTSIIHMYAKKGDLDSARLAFDKRGSRDAVSFTA 159
G+QVH HV+K GL+ + FVHTS+I+MYA+ G+L +ARL FDK RDAVSFTA
Sbjct: 140 KIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTA 199
Query: 158 LINGYVSGGRFDDARKLFDEIPDKDVVSWNAIISGFSQMGRFDEALGLFEEM 3
LI GY S G D+AR+LFDEIP +DVVSWNA+ISG++Q GR +EA+ FEEM
Sbjct: 200 LITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEM 251
Score = 73.9 bits (180), Expect = 3e-11
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 6/199 (3%)
Frame = -2
Query: 656 LSLLARCKNVETIKQ----VHSQFIKFGLHNTQFALTKLIEFCAIGDDLPYASAIFHSIE 489
LS+L+ C + Q V S GL + + LI+ DL AS +F I+
Sbjct: 264 LSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ 323
Query: 488 NPNHIAYNMLIRGVSLSSWPNLGIDYFVKMLWNGIQPNSYTFPFVFXXXXXXXXXXXGRQ 309
+ N +++N++I G + S + F +M+ + I PN TF + G+
Sbjct: 324 DKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKW 383
Query: 308 VHGHVMKF--GLQDDVFVHTSIIHMYAKKGDLDSARLAFDKRGSRDAVSFTALINGYVSG 135
VH +V K +++ V + TS+I MYAK GDL A+ FD ++ ++ A+I+G+
Sbjct: 384 VHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMH 443
Query: 134 GRFDDARKLFDEIPDKDVV 78
G D A LF + + V
Sbjct: 444 GHTDTALGLFSRMTSEGFV 462
Score = 66.2 bits (160), Expect = 6e-09
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 5/210 (2%)
Frame = -2
Query: 617 KQVHSQFIKFGLHNTQFALTKLIEFCAIGDDLPYASAIFHSIENPNHIAYNMLIRGVSLS 438
KQVH+ +K GL + F T LI A +L A +F + +++ LI G +
Sbjct: 148 KQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASK 207
Query: 437 SWPNLGIDYFVKMLWNGIQPNSYTFPFVFXXXXXXXXXXXGRQVHGHVMKFGLQDDVFVH 258
+ + + F ++ + ++ + + + + +V
Sbjct: 208 GFLDEARELFDEIPVRDV----VSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTM 263
Query: 257 TSIIHMYAKKGDL----DSARLAFDKRGSRDAVSFT-ALINGYVSGGRFDDARKLFDEIP 93
S++ A+ G + R + RG + LI+ YV G ++A LF++I
Sbjct: 264 LSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ 323
Query: 92 DKDVVSWNAIISGFSQMGRFDEALGLFEEM 3
DK+VVSWN +I G++ M + EALGLF M
Sbjct: 324 DKNVVSWNVMIGGYTHMSCYKEALGLFRRM 353
>ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 273 bits (697), Expect = 3e-71
Identities = 135/231 (58%), Positives = 169/231 (73%), Gaps = 2/231 (0%)
Frame = -2
Query: 689 PPYTLLQTHPSLSLLARCKNVETIKQVHSQFIKFGLHNTQFALTKLIEFCAIGD--DLPY 516
PPY LLQ HPSL+LL+ CK+ + +KQ+HSQ IK GLHNTQFAL+KLIEFCAI +L Y
Sbjct: 25 PPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSY 84
Query: 515 ASAIFHSIENPNHIAYNMLIRGVSLSSWPNLGIDYFVKMLWNGIQPNSYTFPFVFXXXXX 336
A +F SIE PN +N +IRG SLSS P ID++V+ML G++PNSYTFPF+
Sbjct: 85 ALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAK 144
Query: 335 XXXXXXGRQVHGHVMKFGLQDDVFVHTSIIHMYAKKGDLDSARLAFDKRGSRDAVSFTAL 156
G+Q+HGHV+K GL+ D FVHTS+I+MYA+ G+L A L F K RDAVSFTAL
Sbjct: 145 VGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTAL 204
Query: 155 INGYVSGGRFDDARKLFDEIPDKDVVSWNAIISGFSQMGRFDEALGLFEEM 3
I GY G DDAR+LF+EIP +D VSWNA+I+G++Q GRF+EAL F+EM
Sbjct: 205 ITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM 255
Score = 72.4 bits (176), Expect = 8e-11
Identities = 63/250 (25%), Positives = 93/250 (37%), Gaps = 34/250 (13%)
Frame = -2
Query: 650 LLARCKNVETI---KQVHSQFIKFGLHNTQFALTKLIEFCAIGDDLPYASAIFHSIENPN 480
LL C V KQ+H +K GL + F T LI A +L YA +F +
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRD 197
Query: 479 HIAYNMLIRGVSLS-------------------SWPNL------------GIDYFVKMLW 393
+++ LI G +L SW + + +F +M
Sbjct: 198 AVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKR 257
Query: 392 NGIQPNSYTFPFVFXXXXXXXXXXXGRQVHGHVMKFGLQDDVFVHTSIIHMYAKKGDLDS 213
+ PN T V G V + GL ++ + ++I MY+K GDLD
Sbjct: 258 ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDK 317
Query: 212 ARLAFDKRGSRDAVSFTALINGYVSGGRFDDARKLFDEIPDKDVVSWNAIISGFSQMGRF 33
AR LF+ I +KD++SWN +I G+S M +
Sbjct: 318 -------------------------------ARDLFEGICEKDIISWNVMIGGYSHMNSY 346
Query: 32 DEALGLFEEM 3
EAL LF +M
Sbjct: 347 KEALALFRKM 356
>emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 273 bits (697), Expect = 3e-71
Identities = 135/231 (58%), Positives = 169/231 (73%), Gaps = 2/231 (0%)
Frame = -2
Query: 689 PPYTLLQTHPSLSLLARCKNVETIKQVHSQFIKFGLHNTQFALTKLIEFCAIGD--DLPY 516
PPY LLQ HPSL+LL+ CK+ + +KQ+HSQ IK GLHNTQFAL+KLIEFCAI +L Y
Sbjct: 25 PPYKLLQNHPSLTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSY 84
Query: 515 ASAIFHSIENPNHIAYNMLIRGVSLSSWPNLGIDYFVKMLWNGIQPNSYTFPFVFXXXXX 336
A +F SIE PN +N +IRG SLSS P ID++V+ML G++PNSYTFPF+
Sbjct: 85 ALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAK 144
Query: 335 XXXXXXGRQVHGHVMKFGLQDDVFVHTSIIHMYAKKGDLDSARLAFDKRGSRDAVSFTAL 156
G+Q+HGHV+K GL+ D FVHTS+I+MYA+ G+L A L F K RDAVSFTAL
Sbjct: 145 VGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTAL 204
Query: 155 INGYVSGGRFDDARKLFDEIPDKDVVSWNAIISGFSQMGRFDEALGLFEEM 3
I GY G DDAR+LF+EIP +D VSWNA+I+G++Q GRF+EAL F+EM
Sbjct: 205 ITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEM 255
Score = 72.4 bits (176), Expect = 8e-11
Identities = 63/250 (25%), Positives = 93/250 (37%), Gaps = 34/250 (13%)
Frame = -2
Query: 650 LLARCKNVETI---KQVHSQFIKFGLHNTQFALTKLIEFCAIGDDLPYASAIFHSIENPN 480
LL C V KQ+H +K GL + F T LI A +L YA +F +
Sbjct: 138 LLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRD 197
Query: 479 HIAYNMLIRGVSLS-------------------SWPNL------------GIDYFVKMLW 393
+++ LI G +L SW + + +F +M
Sbjct: 198 AVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKR 257
Query: 392 NGIQPNSYTFPFVFXXXXXXXXXXXGRQVHGHVMKFGLQDDVFVHTSIIHMYAKKGDLDS 213
+ PN T V G V + GL ++ + ++I MY+K GDLD
Sbjct: 258 ANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDK 317
Query: 212 ARLAFDKRGSRDAVSFTALINGYVSGGRFDDARKLFDEIPDKDVVSWNAIISGFSQMGRF 33
AR LF+ I +KD++SWN +I G+S M +
Sbjct: 318 -------------------------------ARDLFEGICEKDIISWNVMIGGYSHMNSY 346
Query: 32 DEALGLFEEM 3
EAL LF +M
Sbjct: 347 KEALALFRKM 356
>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 486
Score = 264 bits (675), Expect = 1e-68
Identities = 130/231 (56%), Positives = 165/231 (71%), Gaps = 2/231 (0%)
Frame = -2
Query: 689 PPYTLLQTHPSLSLLARCKNVETIKQVHSQFIKFGLHNTQFALTKLIEFCAIGD--DLPY 516
PPY LQTHPSL+LL+ CKN++T+KQ+HSQ IK GLHNT FAL+KLIEFC I DL Y
Sbjct: 17 PPYKFLQTHPSLTLLSTCKNLKTLKQIHSQVIKTGLHNTHFALSKLIEFCVISPYGDLSY 76
Query: 515 ASAIFHSIENPNHIAYNMLIRGVSLSSWPNLGIDYFVKMLWNGIQPNSYTFPFVFXXXXX 336
A +F SI PN I +N +IRG+SLS P L I Y+V M+ +G PN+YT+PFV
Sbjct: 77 ALLLFKSIGKPNQIIWNNIIRGLSLSESPILAIQYYVDMISSGFTPNTYTYPFVLKSCAR 136
Query: 335 XXXXXXGRQVHGHVMKFGLQDDVFVHTSIIHMYAKKGDLDSARLAFDKRGSRDAVSFTAL 156
G+Q+HG ++K G +D FVHTS+I MY + G+L +ARL F++ RD VS+TAL
Sbjct: 137 ISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGELGNARLVFERSSMRDVVSYTAL 196
Query: 155 INGYVSGGRFDDARKLFDEIPDKDVVSWNAIISGFSQMGRFDEALGLFEEM 3
I GY S G D A +LFDEIP +DVVSWNA+I+G++Q GRF+EAL FEEM
Sbjct: 197 ITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQSGRFEEALIFFEEM 247
Score = 64.3 bits (155), Expect = 2e-08
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 35/249 (14%)
Frame = -2
Query: 656 LSLLARCKNVETIKQVHSQFIKFGLHNTQFALTKLIEFCAIGDDLPYASAIFHSIENPNH 477
L AR + KQ+H Q +K G N F T LI +L A +F +
Sbjct: 131 LKSCARISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGELGNARLVFERSSMRDV 190
Query: 476 IAYNMLIRGVS-------------------LSSWPNL------------GIDYFVKMLWN 390
++Y LI G + + SW + + +F +ML
Sbjct: 191 VSYTALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQSGRFEEALIFFEEMLRA 250
Query: 389 GIQPNSYTFPFVFXXXXXXXXXXXGRQVHGHVMKFGLQDDVFVHTSIIHMYAKKGDLDSA 210
+ PN T V G V + + GL+ ++ V ++I MYAK GDL++A
Sbjct: 251 NVTPNMSTLLSVLSACAQSGSLKMGNWVSSWIEEHGLESNIKVMNALIDMYAKCGDLENA 310
Query: 209 RLAFDKRGSRDAVSFTALINGYVSGGRFDDARKLFDEIPDKDV----VSWNAIISGFSQM 42
F+ +++ +S+ +I GY + +A LF ++ +V V+ +I+ + +
Sbjct: 311 LHLFEGIKNKNVISWNVMIGGYTHLSCYKEALGLFRQMLQSNVEPNDVTLLSILPACANL 370
Query: 41 GRFDEALGL 15
G ALGL
Sbjct: 371 G----ALGL 375
>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 260 bits (665), Expect = 2e-67
Identities = 124/231 (53%), Positives = 172/231 (74%), Gaps = 2/231 (0%)
Frame = -2
Query: 689 PPYTLLQTHPSLSLLARCKNVETIKQVHSQFIKFGLHNTQFALTKLIEFCAIG--DDLPY 516
PPY +LQ HPSL LL++C+++ T KQ+H+ IK GLHNT FAL+KLIEF A+ D+ Y
Sbjct: 22 PPYRVLQEHPSLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISY 81
Query: 515 ASAIFHSIENPNHIAYNMLIRGVSLSSWPNLGIDYFVKMLWNGIQPNSYTFPFVFXXXXX 336
A ++F+SIE PN +N +IRG+S+S P L + +FV+M+++G++PNSYTFPF+
Sbjct: 82 AISLFNSIEEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAK 141
Query: 335 XXXXXXGRQVHGHVMKFGLQDDVFVHTSIIHMYAKKGDLDSARLAFDKRGSRDAVSFTAL 156
G+Q+H HV+K G DVF+HTS+I+MYA+ G++++A+L FD+ RDA+SFTAL
Sbjct: 142 LASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTAL 201
Query: 155 INGYVSGGRFDDARKLFDEIPDKDVVSWNAIISGFSQMGRFDEALGLFEEM 3
I GY G D AR+LFDE+P KDVVSWNA+I+G++QMGR EAL LFE+M
Sbjct: 202 IAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDM 252
Score = 62.0 bits (149), Expect = 1e-07
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 4/222 (1%)
Frame = -2
Query: 656 LSLLARCKNVETIKQVHSQFIKFGLHNTQFALTKLIEFCAIGDDLPYASAIFHSIENPNH 477
LS A+ ++ + S GL + + LI+ + DL A +F + +
Sbjct: 268 LSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDV 327
Query: 476 IAYNMLIRGVSLSSWPNLGIDYFVKMLWNGIQPNSYTFPFVFXXXXXXXXXXXGRQVHGH 297
I++N++I G + + F +ML +G++P TF + G+ +H +
Sbjct: 328 ISWNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAY 387
Query: 296 VMKFGLQDDVFVHTSIIHMYAKKGDLDSARLAFDKRGSRDAVSFTALINGYVSGGRFDDA 117
+ K + TS+I +YAK G++ +AR FD + S+ A+I G G+ D A
Sbjct: 388 INKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKA 447
Query: 116 RKLFDEIPDKDV----VSWNAIISGFSQMGRFDEALGLFEEM 3
+LF ++ + +++ I+S G D F M
Sbjct: 448 FELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSM 489