BLASTX nr result

ID: Lithospermum22_contig00001587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001587
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316411.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_004138836.1| PREDICTED: cyclin-dependent protein kinase i...    72   4e-11
emb|CAN72854.1| hypothetical protein VITISV_043216 [Vitis vinifera]    67   2e-09
ref|XP_002314312.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002298165.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002316411.1| predicted protein [Populus trichocarpa] gi|222865451|gb|EEF02582.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 44/107 (41%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
 Frame = +2

Query: 41  MSTNLQHQQDLPQTRLVQTIKIESLQNSYVSEDVFSPTRPLDRSGSRNNEEEDECKTPRS 220
           MST+L+   DLP+ ++   IKIE+LQ+   ++   +  +        N+E +D+C+TP+S
Sbjct: 1   MSTDLELLHDLPRIQVRPAIKIETLQSCSATDGNKAIIQ------QENSETDDDCQTPKS 54

Query: 221 TKNLIPKINSCPPAPKKSKRVPSCKRKL---EFFEVTARQEIESFFK 352
            ++ IP + SCPPAP+K+KR  SCKRKL   +FFE+   +E++SFF+
Sbjct: 55  EEHKIPAVLSCPPAPRKAKRNISCKRKLTEIDFFEIVNGEEVDSFFQ 101


>ref|XP_004138836.1| PREDICTED: cyclin-dependent protein kinase inhibitor SMR1-like
           [Cucumis sativus] gi|449493273|ref|XP_004159241.1|
           PREDICTED: cyclin-dependent protein kinase inhibitor
           SMR1-like [Cucumis sativus]
          Length = 123

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 46/124 (37%), Positives = 74/124 (59%), Gaps = 5/124 (4%)
 Frame = +2

Query: 41  MSTNLQHQQDLPQTRLVQTIKIESLQNSYVSEDVFSPTRPLDRSGSRNNEEEDECKTPRS 220
           MS +L+  ++LP+ RL   +++ S     +S+++  P+   D    R +     C+TP S
Sbjct: 1   MSMDLEFPKNLPKIRL--PLQVRSPPKPSLSDNII-PSSDHDSDLDRRS-----CRTPTS 52

Query: 221 TKNLIPKINSCPPAPKKSKRVP-SCKRK----LEFFEVTARQEIESFFKRAGVINSNETA 385
            ++ IPKI SCP APKK KR P  CKRK    L+FFE+  ++E+++FF+ A  + S+ TA
Sbjct: 53  AEHKIPKILSCPGAPKKPKRPPVPCKRKLTMELKFFEIVNQEEVDNFFRSAYDLESSPTA 112

Query: 386 KRRR 397
             +R
Sbjct: 113 PPKR 116


>emb|CAN72854.1| hypothetical protein VITISV_043216 [Vitis vinifera]
          Length = 102

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
 Frame = +2

Query: 158 PLDRSGSRNNEEEDECKTPRSTKNLIPKINSCPPAPKKSKRVPSCKRKL---EFFEVTAR 328
           PL      +N E   C+TP S ++ IP I +CPPAP+K +RV  CKR++   +FFE+  R
Sbjct: 20  PLGSKIESDNAETSPCRTPTSAEHKIPVILTCPPAPRKPRRVVRCKRRIREFDFFEIVNR 79

Query: 329 QEIESFFKRAGVINSNETAKRR 394
            E+E FF+ +  +     AKRR
Sbjct: 80  DEVEEFFRSSLEVGE---AKRR 98


>ref|XP_002314312.1| predicted protein [Populus trichocarpa] gi|222850720|gb|EEE88267.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
 Frame = +2

Query: 188 EEEDECKTPRSTKNLIPKINSCPPAPKKSKRVPSCKRKL-EFFEVTARQEIESFFKRAGV 364
           ++++ECKTP S+ + IP I SCPP P+K  +V   KRKL EFFE T   E+ESFF+ +  
Sbjct: 35  DDQEECKTPTSSDHKIPAIQSCPPTPRKKVQVFEHKRKLPEFFETTNNDEVESFFRSSFE 94

Query: 365 I----NSNETAKRR 394
           I    N +   KRR
Sbjct: 95  ISTRVNESRPMKRR 108


>ref|XP_002298165.1| predicted protein [Populus trichocarpa] gi|222845423|gb|EEE82970.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/74 (41%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
 Frame = +2

Query: 188 EEEDECKTPRSTKNLIPKINSCPPAPKKSKRVPSCKRKL-EFFEVTARQEIESFFKRA-- 358
           ++++EC+TP S+ + IP I SCPP P+K  +V + KRK+ EFF+ T + E+ESFF+ +  
Sbjct: 69  DDQEECRTPTSSDHKIPTIRSCPPTPRKKVQVFAHKRKIPEFFDTTNKDEVESFFRSSFE 128

Query: 359 --GVINSNETAKRR 394
               +N +   KRR
Sbjct: 129 VPSRVNQSRPMKRR 142


Top