BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001519
         (1456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   292   1e-76
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   288   2e-75
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   288   2e-75
gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein pre...   288   3e-75
ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ri...   275   2e-71

>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
            Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
            29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  292 bits (748), Expect = 1e-76
 Identities = 173/284 (60%), Positives = 201/284 (70%), Gaps = 3/284 (1%)
 Frame = +1

Query: 190  MVSSASSLNFLSLTPQTL-YXXXXXXXXXXXXXXXXXXALKLTTPLTMKPFLESRLVRNV 366
            M SSASSL+FLSLTPQTL                    +L L+   +   F  SR VR V
Sbjct: 1    MASSASSLHFLSLTPQTLPLPKPTSQTTSLSFFSLPPSSLNLSLSSSSSCF-SSRFVRKV 59

Query: 367  AVSSEFNPVEQDAEGGIFYEEGAEVA-SFSPDLQIFVGNLPFSVDSSALAGLFGRAGTVE 543
             +S +F+ +E D E G   ++G E   +FSPDL+IFVGNLPFS DS+ALA LF RAG VE
Sbjct: 60   TLS-DFDQIE-DVEDG---DDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAGNVE 114

Query: 544  MVEVIYDKVTGRSRGFGFVTMSSVEEVQAAVQQFNGYELDGRELRVNSGPPPPKRDNFAX 723
            MVEVIYDK+TGRSRGFGFVTMSS EEV+AA QQFNGYELDGR LRVNSGPPP KR+N + 
Sbjct: 115  MVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENSS- 173

Query: 724  XXXXXXXXXXXXXXXXXXXRVYVGNLSWGVDDLALQNLFREQGKVMEARVVYDRESGRSR 903
                               RVYVGNL+WGVD  AL+ LF EQGKV++A+VVYDR+SGRSR
Sbjct: 174  ----FRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSR 229

Query: 904  GFGFVTFSSPEEVNSAVEALDGTDLDGRTIRVSPAEAR-QRRQF 1032
            GFGFVT+SS EEVN+A+E+LDG DL+GR IRVSPAEAR  RRQF
Sbjct: 230  GFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
            Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
            RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  288 bits (738), Expect = 2e-75
 Identities = 172/287 (59%), Positives = 200/287 (69%), Gaps = 6/287 (2%)
 Frame = +1

Query: 190  MVSSASSLNFLSLTPQTLYXXXXXXXXXXXXXXXXXXA---LKLTTPLTMKPFLESRLVR 360
            M SSASSL+FLSLTPQTL                   +   L L++P +      SR VR
Sbjct: 1    MASSASSLHFLSLTPQTLLLPKPTSQTTSLSFFSLPPSSLNLSLSSPSSC---FSSRFVR 57

Query: 361  NVAVSSEFNPVEQDAEGGIFYEEGAEVA-SFSPDLQIFVGNLPFSVDSSALAGLFGRAGT 537
             V +  +F+ +E D E G   +EG E   +FSPDL+IFVGNL FS DS+ALA LF RAG 
Sbjct: 58   KVTLP-DFDQIE-DVEDG---DEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAGN 112

Query: 538  VEMVEVIYDKVTGRSRGFGFVTMSSVEEVQAAVQQFNGYELDGRELRVNSGPPPPKRDNF 717
            VEMVEVIYDK+TGRSRGFGFVTMSS EEV+AA QQFNGYELDGR LRVNSGPPP KR+N 
Sbjct: 113  VEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKRENS 172

Query: 718  A-XXXXXXXXXXXXXXXXXXXXRVYVGNLSWGVDDLALQNLFREQGKVMEARVVYDRESG 894
            +                     RVYVGNL+WGVD  AL+ LF EQGKV++A+VVYDR+SG
Sbjct: 173  SFRENSSFRGGSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSG 232

Query: 895  RSRGFGFVTFSSPEEVNSAVEALDGTDLDGRTIRVSPAEAR-QRRQF 1032
            RSRGFGFVT+SS EEVN+A+E+LDG DL+GR IRVSPAEAR  RRQF
Sbjct: 233  RSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
            vinifera]
          Length = 288

 Score =  288 bits (737), Expect = 2e-75
 Identities = 154/239 (64%), Positives = 182/239 (76%), Gaps = 8/239 (3%)
 Frame = +1

Query: 340  LESRLVRNVAVSSEFNPVEQDAEGGIFYEEGAEVASFSPDLQIFVGNLPFSVDSSALAGL 519
            L SR VRNVAVSS++   EQD +  +  +EG    SFSPDL++FVGNLPF+VDS+ LAGL
Sbjct: 57   LSSRFVRNVAVSSDY---EQDED--VLSDEGEP--SFSPDLKLFVGNLPFNVDSAGLAGL 109

Query: 520  FGRAGTVEMVEVIYDKVTGRSRGFGFVTMSSVEEVQAAVQQFNGYELDGRELRVNSGPPP 699
            F +AG VEMVEVIYDK+TGRSRGFGFVTMS+VEEV+AA QQFNGYEL+GR+LRVNSGPPP
Sbjct: 110  FEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPP 169

Query: 700  PKRDNFAXXXXXXXXXXXXXXXXXXXX--------RVYVGNLSWGVDDLALQNLFREQGK 855
             +R+N                              R+YVGNLSWGVDDLAL+ LF EQGK
Sbjct: 170  ARRENSNFRGENSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGK 229

Query: 856  VMEARVVYDRESGRSRGFGFVTFSSPEEVNSAVEALDGTDLDGRTIRVSPAEARQRRQF 1032
            V EARV+YDRE+GRSRGFGFVT++S EEVN A+E+LDG DL+GR+IRV+ AEAR RRQF
Sbjct: 230  VTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEARPRRQF 288


>gb|AAL39067.1|AF389431_1 single-stranded DNA binding protein precursor [Solanum tuberosum]
          Length = 289

 Score =  288 bits (736), Expect = 3e-75
 Identities = 169/291 (58%), Positives = 199/291 (68%), Gaps = 10/291 (3%)
 Frame = +1

Query: 190  MVSSASSLNFLSLTPQTLYXXXXXXXXXXXXXXXXXXA-LKLTTPLTMKPFLESRLVRNV 366
            M SS+SSL+FLSLTPQTL                     L L++  T + F  SR VR V
Sbjct: 1    MASSSSSLHFLSLTPQTLPKPTSQTTSISFFSLPPSSLNLSLSSSSTPRNFESSRFVRKV 60

Query: 367  AVSSEFNPVEQ------DAEGGIFYEEGA--EVASFSPDLQIFVGNLPFSVDSSALAGLF 522
             +S +F+ +E+      D E G   +EGA  E  + +PDL+IFVGNLPFSVDS+ALA LF
Sbjct: 61   TLS-DFDQIEEVEAGDDDEEEGGLSDEGASYEERNANPDLKIFVGNLPFSVDSAALAELF 119

Query: 523  GRAGTVEMVEVIYDKVTGRSRGFGFVTMSSVEEVQAAVQQFNGYELDGRELRVNSGPPPP 702
             RAG VEMVEVIYDK+TGRSRGFGFVTMSS E V+AA QQFNGYE+DGR LRVNSGP PP
Sbjct: 120  ERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVNSGPAPP 179

Query: 703  KRDNFAXXXXXXXXXXXXXXXXXXXXRVYVGNLSWGVDDLALQNLFREQGKVMEARVVYD 882
            KR+N +                    RVYVGNL+W VD   L+ LF EQGKV++A+VVYD
Sbjct: 180  KREN-SFGDNSSYQGGRGGGSMDSSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYD 238

Query: 883  RESGRSRGFGFVTFSSPEEVNSAVEALDGTDLDGRTIRVSPAEAR-QRRQF 1032
            R+SGRSRGFGFVT+SS +EVN A+E+LDG DL GR IRVSPAEAR  RRQF
Sbjct: 239  RDSGRSRGFGFVTYSSAKEVNDAIESLDGVDLGGRAIRVSPAEARPPRRQF 289


>ref|XP_002519525.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
            gi|223541388|gb|EEF42939.1| ribonucleoprotein,
            chloroplast, putative [Ricinus communis]
          Length = 280

 Score =  275 bits (703), Expect = 2e-71
 Identities = 146/239 (61%), Positives = 178/239 (74%), Gaps = 1/239 (0%)
 Frame = +1

Query: 319  PLTMKPFLES-RLVRNVAVSSEFNPVEQDAEGGIFYEEGAEVASFSPDLQIFVGNLPFSV 495
            PL  +P+  S R V +VA+SSEF   E  +  G       + +SFS DL++FVGNLPF+V
Sbjct: 51   PLQQQPYSSSSRFVPSVAISSEFGQEEDVSSDG-------DESSFSQDLKLFVGNLPFNV 103

Query: 496  DSSALAGLFGRAGTVEMVEVIYDKVTGRSRGFGFVTMSSVEEVQAAVQQFNGYELDGREL 675
            DS+ LAGLF  AG VEMVEVIYDKVTGRSRGFGFVTMSS++EV+AA QQFNGYEL+GR L
Sbjct: 104  DSAQLAGLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSIDEVEAAAQQFNGYELEGRAL 163

Query: 676  RVNSGPPPPKRDNFAXXXXXXXXXXXXXXXXXXXXRVYVGNLSWGVDDLALQNLFREQGK 855
            RVNSGPPP +  +F+                    R+YVGNLSW VD+LAL++ F EQGK
Sbjct: 164  RVNSGPPPQRESSFS--RSPRFGGGGGGGESLEGNRLYVGNLSWSVDNLALESFFSEQGK 221

Query: 856  VMEARVVYDRESGRSRGFGFVTFSSPEEVNSAVEALDGTDLDGRTIRVSPAEARQRRQF 1032
            V++A+VVYDRESGRSRGFGFVT+SS EEV +A+++L+G +LDGR IRVS AEAR RRQF
Sbjct: 222  VVDAKVVYDRESGRSRGFGFVTYSSAEEVENAIDSLNGAELDGRAIRVSVAEARPRRQF 280