BLASTX nr result

ID: Lithospermum22_contig00001511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001511
         (1108 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567531.1| 50S ribosomal protein L19-1 [Arabidopsis thalia...   190   6e-46
ref|NP_568677.1| 50S ribosomal protein L19-2 [Arabidopsis thalia...   186   1e-44
gb|AAM64533.1| contains similarity to plastid ribosomal protein ...   185   2e-44
ref|XP_002863352.1| hypothetical protein ARALYDRAFT_494259 [Arab...   185   2e-44
ref|XP_002870097.1| ribosomal protein L19 family protein [Arabid...   184   3e-44

>ref|NP_567531.1| 50S ribosomal protein L19-1 [Arabidopsis thaliana]
           gi|75248729|sp|Q8W463.1|RK191_ARATH RecName: Full=50S
           ribosomal protein L19-1, chloroplastic; Flags: Precursor
           gi|17065490|gb|AAL32899.1| Unknown protein [Arabidopsis
           thaliana] gi|20148593|gb|AAM10187.1| unknown protein
           [Arabidopsis thaliana] gi|21554252|gb|AAM63327.1|
           contains similarity to plastid ribosomal protein L19
           [Arabidopsis thaliana] gi|332658510|gb|AEE83910.1| 50S
           ribosomal protein L19-1 [Arabidopsis thaliana]
          Length = 225

 Score =  190 bits (482), Expect = 6e-46
 Identities = 113/230 (49%), Positives = 140/230 (60%), Gaps = 6/230 (2%)
 Frame = -3

Query: 977 MSTNLLPQALYMVPRNPILQFGQKQQAFSCFVA-KPSSPSGLCIARIMSN----AFGFK- 816
           MS + LPQAL+M+PRNP      K   FS F++  PS  S + ++R+  N     FGF  
Sbjct: 3   MSFHRLPQALHMIPRNPTQS--SKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSL 60

Query: 815 KLKKQNSFCVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAPRKERIKLGDIM 636
             + +N F VR                                   K  RK RIKLGD+M
Sbjct: 61  DTRVRNEFIVRAEEGNTEAESEEFVAEIADTEGNVEEVVEA-----KPTRKPRIKLGDVM 115

Query: 635 GILNKKAVEASDEIRKTPDIRVGDVVQIKLEVPENKRRLSVYKGIVMSKQNXXXXXXXXX 456
           GILN+KA+E ++++R  P+IR GD+V+IKLEVPENKRRLS+YKGIVMS+QN         
Sbjct: 116 GILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRI 175

Query: 455 XXXXXXXGVEIVFPVYSPNIKELQVLSHRKVRRARLYYLRDKLPRLSTFK 306
                  GVEIVFP+YSPNIKE++V+SHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 176 RRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225


>ref|NP_568677.1| 50S ribosomal protein L19-2 [Arabidopsis thaliana]
           gi|75247671|sp|Q8RXX5.1|RK192_ARATH RecName: Full=50S
           ribosomal protein L19-2, chloroplastic; Flags: Precursor
           gi|19347900|gb|AAL85972.1| unknown protein [Arabidopsis
           thaliana] gi|21436235|gb|AAM51256.1| unknown protein
           [Arabidopsis thaliana] gi|332008099|gb|AED95482.1| 50S
           ribosomal protein L19-2 [Arabidopsis thaliana]
          Length = 229

 Score =  186 bits (471), Expect = 1e-44
 Identities = 108/228 (47%), Positives = 135/228 (59%), Gaps = 5/228 (2%)
 Frame = -3

Query: 974 STNLLPQALYMVPRNPILQFGQKQQAFSCFVAKPSSP-SGLCIARIM----SNAFGFKKL 810
           S++LLPQAL+M+PR P   F  K    S  + + SS  S L ++R+     S+ FGF   
Sbjct: 4   SSHLLPQALHMIPRTP--SFSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAID 61

Query: 809 KKQNSFCVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAPRKERIKLGDIMGI 630
            K+    +                                    K P K R+KLGDIMG+
Sbjct: 62  SKKRKEFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGL 121

Query: 629 LNKKAVEASDEIRKTPDIRVGDVVQIKLEVPENKRRLSVYKGIVMSKQNXXXXXXXXXXX 450
           LNKKA+E ++ +R  P +R GD+V+IKLEVPENKRRLS+YKGIVMS+QN           
Sbjct: 122 LNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRR 181

Query: 449 XXXXXGVEIVFPVYSPNIKELQVLSHRKVRRARLYYLRDKLPRLSTFK 306
                GVEIVFP+YSPNIKE++V+SHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 182 IIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229


>gb|AAM64533.1| contains similarity to plastid ribosomal protein L19 [Arabidopsis
           thaliana]
          Length = 229

 Score =  185 bits (470), Expect = 2e-44
 Identities = 108/228 (47%), Positives = 135/228 (59%), Gaps = 5/228 (2%)
 Frame = -3

Query: 974 STNLLPQALYMVPRNPILQFGQKQQAFSCFVAKPSSP-SGLCIARIM----SNAFGFKKL 810
           S++LLPQAL+M+PR P   F  K    S  + + SS  S L ++R+     S+ FGF   
Sbjct: 4   SSHLLPQALHMIPRTP--SFSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAID 61

Query: 809 KKQNSFCVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAPRKERIKLGDIMGI 630
            K+    +                                    K P K R+KLGDIMG+
Sbjct: 62  SKKRREFIAKAEESTEGETEAVVENAVETEAEGEGEATVAAEEAKPPWKTRVKLGDIMGL 121

Query: 629 LNKKAVEASDEIRKTPDIRVGDVVQIKLEVPENKRRLSVYKGIVMSKQNXXXXXXXXXXX 450
           LNKKA+E ++ +R  P +R GD+V+IKLEVPENKRRLS+YKGIVMS+QN           
Sbjct: 122 LNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRR 181

Query: 449 XXXXXGVEIVFPVYSPNIKELQVLSHRKVRRARLYYLRDKLPRLSTFK 306
                GVEIVFP+YSPNIKE++V+SHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 182 IIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229


>ref|XP_002863352.1| hypothetical protein ARALYDRAFT_494259 [Arabidopsis lyrata subsp.
           lyrata] gi|297309187|gb|EFH39611.1| hypothetical protein
           ARALYDRAFT_494259 [Arabidopsis lyrata subsp. lyrata]
          Length = 222

 Score =  185 bits (469), Expect = 2e-44
 Identities = 111/226 (49%), Positives = 138/226 (61%), Gaps = 3/226 (1%)
 Frame = -3

Query: 974 STNLLPQALYMVPRNPILQFGQKQQAFSCFVAKPSSP-SGLCIARIMSNA-FGFK-KLKK 804
           S++LLPQAL+M+PR P   F  K    S  + + SS  S L ++   S++ FGF    KK
Sbjct: 4   SSHLLPQALHMIPRIPT--FSSKNLGVSSILPRASSSKSRLSVSTNHSSSNFGFAIDSKK 61

Query: 803 QNSFCVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAPRKERIKLGDIMGILN 624
           +  F VR                                   + PRK R+KLGDIMG+LN
Sbjct: 62  RREFIVRAEESTEGETEAVVENAVEAEAEAAVAEEEA-----RPPRKTRVKLGDIMGLLN 116

Query: 623 KKAVEASDEIRKTPDIRVGDVVQIKLEVPENKRRLSVYKGIVMSKQNXXXXXXXXXXXXX 444
           KKA+E ++ +R  P +R GD+V+IKLEVPENKRRLS+YKGIVMS+QN             
Sbjct: 117 KKAIEVAENVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRII 176

Query: 443 XXXGVEIVFPVYSPNIKELQVLSHRKVRRARLYYLRDKLPRLSTFK 306
              GVEIVFP+YSPNIKE++V+SHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 177 AGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 222


>ref|XP_002870097.1| ribosomal protein L19 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297315933|gb|EFH46356.1| ribosomal protein
           L19 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 225

 Score =  184 bits (468), Expect = 3e-44
 Identities = 111/229 (48%), Positives = 138/229 (60%), Gaps = 6/229 (2%)
 Frame = -3

Query: 974 STNLLPQALYMVPRNPILQFGQKQQAFSCFVA-KPSSPSGLCIARIM----SNAFGFK-K 813
           S + LPQAL+M PRNP      K   FS F++  PS  S + ++R+     S+ FGF   
Sbjct: 4   SFHRLPQALHMTPRNPTQS--SKNLGFSSFLSCAPSMNSRISVSRLSLNHSSSKFGFSLD 61

Query: 812 LKKQNSFCVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKAPRKERIKLGDIMG 633
            + +  F VR                                   K  RK RIKLGD+MG
Sbjct: 62  TRVRKEFIVRVEEGNTEAESEEAVAEIADTEGNVEEVGEA-----KPQRKPRIKLGDVMG 116

Query: 632 ILNKKAVEASDEIRKTPDIRVGDVVQIKLEVPENKRRLSVYKGIVMSKQNXXXXXXXXXX 453
           ILN++A+E S+++R  P+IR GD+V+IKLEVPENKRRLS+YKGIVMS+QN          
Sbjct: 117 ILNQRAIEVSEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIR 176

Query: 452 XXXXXXGVEIVFPVYSPNIKELQVLSHRKVRRARLYYLRDKLPRLSTFK 306
                 GVEIVFP+YSPNIKE++V+SHRKVRRARLYYLRDKLPRLSTFK
Sbjct: 177 RIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225


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