BLASTX nr result

ID: Lithospermum22_contig00001501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001501
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, ...   120   1e-25
sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 hom...   120   1e-25
ref|XP_004171880.1| PREDICTED: translation factor GUF1 homolog, ...   119   2e-25
ref|XP_004144367.1| PREDICTED: translation factor GUF1 homolog, ...   119   2e-25
ref|XP_002513274.1| GTP-binding protein lepa, putative [Ricinus ...   119   3e-25

>ref|XP_002272359.1| PREDICTED: translation factor GUF1 homolog, chloroplastic [Vitis
           vinifera] gi|296082645|emb|CBI21650.3| unnamed protein
           product [Vitis vinifera]
          Length = 680

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/77 (77%), Positives = 64/77 (83%)
 Frame = -1

Query: 236 FEPESSSAMXXXXXXXXXXXLHMEIVQERLEREYNLTLITTAPSVVYRVNCVNGDTVECS 57
           FEPE+SSAM           LHMEI+QERLEREYNLTLITTAPSVVYRVNC+NGDTVECS
Sbjct: 406 FEPETSSAMGFGFRCGFLGLLHMEIIQERLEREYNLTLITTAPSVVYRVNCINGDTVECS 465

Query: 56  NPSLLPEAGQRGSIEEP 6
           NPSLLPE G+R SIEEP
Sbjct: 466 NPSLLPEPGKRTSIEEP 482


>sp|A5B4D2.1|GUFP_VITVI RecName: Full=Translation factor GUF1 homolog, chloroplastic;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|147841933|emb|CAN60938.1| hypothetical protein
           VITISV_013255 [Vitis vinifera]
          Length = 680

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/77 (77%), Positives = 64/77 (83%)
 Frame = -1

Query: 236 FEPESSSAMXXXXXXXXXXXLHMEIVQERLEREYNLTLITTAPSVVYRVNCVNGDTVECS 57
           FEPE+SSAM           LHMEI+QERLEREYNLTLITTAPSVVYRVNC+NGDTVECS
Sbjct: 406 FEPETSSAMGFGFRCGFLGLLHMEIIQERLEREYNLTLITTAPSVVYRVNCINGDTVECS 465

Query: 56  NPSLLPEAGQRGSIEEP 6
           NPSLLPE G+R SIEEP
Sbjct: 466 NPSLLPEPGKRTSIEEP 482


>ref|XP_004171880.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like
           [Cucumis sativus]
          Length = 263

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/77 (79%), Positives = 64/77 (83%)
 Frame = -1

Query: 236 FEPESSSAMXXXXXXXXXXXLHMEIVQERLEREYNLTLITTAPSVVYRVNCVNGDTVECS 57
           FEPE+SSAM           LHMEIVQERLEREYNL+LITTAPSVVYRVNCVNGDTVECS
Sbjct: 78  FEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECS 137

Query: 56  NPSLLPEAGQRGSIEEP 6
           NPSLLPE G+R SIEEP
Sbjct: 138 NPSLLPEPGKRRSIEEP 154


>ref|XP_004144367.1| PREDICTED: translation factor GUF1 homolog, chloroplastic-like
           [Cucumis sativus]
          Length = 628

 Score =  119 bits (299), Expect = 2e-25
 Identities = 61/77 (79%), Positives = 64/77 (83%)
 Frame = -1

Query: 236 FEPESSSAMXXXXXXXXXXXLHMEIVQERLEREYNLTLITTAPSVVYRVNCVNGDTVECS 57
           FEPE+SSAM           LHMEIVQERLEREYNL+LITTAPSVVYRVNCVNGDTVECS
Sbjct: 408 FEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECS 467

Query: 56  NPSLLPEAGQRGSIEEP 6
           NPSLLPE G+R SIEEP
Sbjct: 468 NPSLLPEPGKRRSIEEP 484


>ref|XP_002513274.1| GTP-binding protein lepa, putative [Ricinus communis]
           gi|317411669|sp|B9RHQ5.1|GUFP_RICCO RecName:
           Full=Translation factor GUF1 homolog, chloroplastic;
           AltName: Full=Elongation factor 4 homolog; Short=EF-4;
           AltName: Full=GTPase GUF1 homolog; AltName:
           Full=Ribosomal back-translocase; Flags: Precursor
           gi|223547648|gb|EEF49142.1| GTP-binding protein lepa,
           putative [Ricinus communis]
          Length = 693

 Score =  119 bits (298), Expect = 3e-25
 Identities = 61/78 (78%), Positives = 65/78 (83%)
 Frame = -1

Query: 236 FEPESSSAMXXXXXXXXXXXLHMEIVQERLEREYNLTLITTAPSVVYRVNCVNGDTVECS 57
           FEPE+SSAM           LHMEIVQERLEREYNL+LITTAPSVVYRVNCV+GDTVECS
Sbjct: 409 FEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVDGDTVECS 468

Query: 56  NPSLLPEAGQRGSIEEPL 3
           NPSLLPE G+R SIEEPL
Sbjct: 469 NPSLLPEPGKRRSIEEPL 486


Top