BLASTX nr result

ID: Lithospermum22_contig00001478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001478
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36518.3| unnamed protein product [Vitis vinifera]              226   6e-57
ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis ...   225   1e-56
emb|CBI38929.3| unnamed protein product [Vitis vinifera]              224   1e-56
ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like is...   223   5e-56
gb|AFW79293.1| hypothetical protein ZEAMMB73_225348 [Zea mays]        218   9e-55

>emb|CBI36518.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score =  226 bits (575), Expect = 6e-57
 Identities = 111/143 (77%), Positives = 125/143 (87%)
 Frame = +3

Query: 63  RKMSTEDVVLXXXXXXXXXXXXXMDIMTALQMVLRKSRAHGGLAKGLHEGAKVVEKHAAQ 242
           RKMS ++ V+             +D+MTALQ+VLRKS AHGGL +GLHEGAKV+EKHAAQ
Sbjct: 36  RKMSGDEAVVVEAAAAPPLGET-LDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQ 94

Query: 243 LCVLAEDCDQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSC 422
           LCVLAEDC+QPDY+KLVKALCADHNVSLI+VPSAKTLGEWAGLCKIDSEGKARKVVGCSC
Sbjct: 95  LCVLAEDCNQPDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSC 154

Query: 423 LVVKDYGEETEGLHIVQEYVKSH 491
           +VVKDYGEET GLHIVQE+VKS+
Sbjct: 155 VVVKDYGEETPGLHIVQEHVKSN 177


>ref|XP_002279327.1| PREDICTED: 40S ribosomal protein S12 [Vitis vinifera]
          Length = 140

 Score =  225 bits (573), Expect = 1e-56
 Identities = 106/120 (88%), Positives = 117/120 (97%)
 Frame = +3

Query: 132 MDIMTALQMVLRKSRAHGGLAKGLHEGAKVVEKHAAQLCVLAEDCDQPDYVKLVKALCAD 311
           +D+MTALQ+VLRKS AHGGL +GLHEGAKV+EKHAAQLCVLAEDC+QPDY+KLVKALCAD
Sbjct: 21  LDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCVLAEDCNQPDYIKLVKALCAD 80

Query: 312 HNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCLVVKDYGEETEGLHIVQEYVKSH 491
           HNVSLI+VPSAKTLGEWAGLCKIDSEGKARKVVGCSC+VVKDYGEET GLHIVQE+VKS+
Sbjct: 81  HNVSLISVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEETPGLHIVQEHVKSN 140


>emb|CBI38929.3| unnamed protein product [Vitis vinifera]
          Length = 228

 Score =  224 bits (572), Expect = 1e-56
 Identities = 111/144 (77%), Positives = 125/144 (86%), Gaps = 1/144 (0%)
 Frame = +3

Query: 63  RKMSTEDVVLXXXXXXXXXXXXX-MDIMTALQMVLRKSRAHGGLAKGLHEGAKVVEKHAA 239
           +KMS E+VV+              MD+MTALQ+VLRKS AHGGLA+GLHEGAKV+EKHAA
Sbjct: 85  KKMSGEEVVVAVETSAPAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAA 144

Query: 240 QLCVLAEDCDQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCS 419
            LCVLAEDC+QPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCS
Sbjct: 145 HLCVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCS 204

Query: 420 CLVVKDYGEETEGLHIVQEYVKSH 491
           C+VVKD+GEETE +++VQ+ VKSH
Sbjct: 205 CVVVKDFGEETEAMNVVQQQVKSH 228


>ref|XP_002272092.1| PREDICTED: 40S ribosomal protein S12-like isoform 2 [Vitis
           vinifera] gi|225465504|ref|XP_002272051.1| PREDICTED:
           40S ribosomal protein S12-like isoform 1 [Vitis
           vinifera]
          Length = 142

 Score =  223 bits (567), Expect = 5e-56
 Identities = 105/120 (87%), Positives = 116/120 (96%)
 Frame = +3

Query: 132 MDIMTALQMVLRKSRAHGGLAKGLHEGAKVVEKHAAQLCVLAEDCDQPDYVKLVKALCAD 311
           MD+MTALQ+VLRKS AHGGLA+GLHEGAKV+EKHAA LCVLAEDC+QPDYVKLVKALCAD
Sbjct: 23  MDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHLCVLAEDCNQPDYVKLVKALCAD 82

Query: 312 HNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCLVVKDYGEETEGLHIVQEYVKSH 491
           HNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSC+VVKD+GEETE +++VQ+ VKSH
Sbjct: 83  HNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFGEETEAMNVVQQQVKSH 142


>gb|AFW79293.1| hypothetical protein ZEAMMB73_225348 [Zea mays]
          Length = 156

 Score =  218 bits (556), Expect = 9e-55
 Identities = 103/120 (85%), Positives = 113/120 (94%)
 Frame = +3

Query: 132 MDIMTALQMVLRKSRAHGGLAKGLHEGAKVVEKHAAQLCVLAEDCDQPDYVKLVKALCAD 311
           MD+MTALQ+V++KS AH GL KGL E AK +EKHAAQLCVLAEDCDQPDYVKLVKALCA+
Sbjct: 37  MDLMTALQLVMKKSGAHDGLVKGLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAE 96

Query: 312 HNVSLITVPSAKTLGEWAGLCKIDSEGKARKVVGCSCLVVKDYGEETEGLHIVQEYVKSH 491
           HNV L+TVPSAKTLGEWAGLCKIDSEGKARKVVGCSC+VVKDYGEE+EGL+IVQEYVKSH
Sbjct: 97  HNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYGEESEGLNIVQEYVKSH 156


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