BLASTX nr result

ID: Lithospermum22_contig00001471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001471
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242027.1| uncharacterized protein LOC100803623 [Glycin...   212   5e-53
emb|CBI24538.3| unnamed protein product [Vitis vinifera]              211   1e-52
ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isofo...   211   1e-52
ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like ...   209   5e-52
ref|XP_002510922.1| 40S ribosomal protein S20, putative [Ricinus...   208   9e-52

>ref|NP_001242027.1| uncharacterized protein LOC100803623 [Glycine max]
           gi|255640525|gb|ACU20548.1| unknown [Glycine max]
          Length = 122

 Score =  212 bits (540), Expect = 5e-53
 Identities = 104/111 (93%), Positives = 111/111 (100%)
 Frame = -2

Query: 569 GLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMPTKVLNITTRKS 390
           GLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDK+LRVKGPVRMPTKVLNITTRKS
Sbjct: 12  GLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLNITTRKS 71

Query: 389 PCGEGTNTFDRFELRVHKRVIDLFSSPEVVKQITSITIEPGVEVEVTIADS 237
           PCGEGTNT+DRFELRVHKR+IDL+SSP+VVKQITSITIEPGVEVE+TIAD+
Sbjct: 72  PCGEGTNTWDRFELRVHKRIIDLYSSPDVVKQITSITIEPGVEVEITIADA 122


>emb|CBI24538.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  211 bits (537), Expect = 1e-52
 Identities = 106/111 (95%), Positives = 110/111 (99%)
 Frame = -2

Query: 569 GLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMPTKVLNITTRKS 390
           GLEEPQE IHKIRITLSSKNVKNLEKVCADLVRGAKDK+LRVKGPVRMPTKVL+ITTRKS
Sbjct: 7   GLEEPQEAIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKS 66

Query: 389 PCGEGTNTFDRFELRVHKRVIDLFSSPEVVKQITSITIEPGVEVEVTIADS 237
           PCGEGTNT+DRFELRVHKRVIDLFSSP+VVKQITSITIEPGVEVEVTIADS
Sbjct: 67  PCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 117


>ref|XP_002265347.1| PREDICTED: 40S ribosomal protein S20-2 isoform 1 [Vitis vinifera]
           gi|359490182|ref|XP_003634047.1| PREDICTED: 40S
           ribosomal protein S20-2 isoform 2 [Vitis vinifera]
           gi|147777804|emb|CAN62522.1| hypothetical protein
           VITISV_002374 [Vitis vinifera]
          Length = 122

 Score =  211 bits (537), Expect = 1e-52
 Identities = 106/111 (95%), Positives = 110/111 (99%)
 Frame = -2

Query: 569 GLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMPTKVLNITTRKS 390
           GLEEPQE IHKIRITLSSKNVKNLEKVCADLVRGAKDK+LRVKGPVRMPTKVL+ITTRKS
Sbjct: 12  GLEEPQEAIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKS 71

Query: 389 PCGEGTNTFDRFELRVHKRVIDLFSSPEVVKQITSITIEPGVEVEVTIADS 237
           PCGEGTNT+DRFELRVHKRVIDLFSSP+VVKQITSITIEPGVEVEVTIADS
Sbjct: 72  PCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 122


>ref|XP_003540910.1| PREDICTED: 40S ribosomal protein S20-2-like [Glycine max]
           gi|356554377|ref|XP_003545523.1| PREDICTED: 40S
           ribosomal protein S20-2-like [Glycine max]
          Length = 122

 Score =  209 bits (531), Expect = 5e-52
 Identities = 105/111 (94%), Positives = 109/111 (98%)
 Frame = -2

Query: 569 GLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMPTKVLNITTRKS 390
           GLEE QEQIHKIRITLSSKNVKNLEKVCADLVRGAKDK LRVKGPVRMPTKVLNITTRKS
Sbjct: 12  GLEESQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLNITTRKS 71

Query: 389 PCGEGTNTFDRFELRVHKRVIDLFSSPEVVKQITSITIEPGVEVEVTIADS 237
           PCGEGTNT+DRFELRVHKRVIDL+SSP+VVKQITSITIEPGVEVEVTIAD+
Sbjct: 72  PCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIADA 122


>ref|XP_002510922.1| 40S ribosomal protein S20, putative [Ricinus communis]
           gi|223550037|gb|EEF51524.1| 40S ribosomal protein S20,
           putative [Ricinus communis]
          Length = 124

 Score =  208 bits (529), Expect = 9e-52
 Identities = 105/111 (94%), Positives = 109/111 (98%)
 Frame = -2

Query: 569 GLEEPQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKKLRVKGPVRMPTKVLNITTRKS 390
           GLEE  EQIHKIRITLSSKNVKNLEKVCADLVRGAKDK+LRVKGPVRMPTKVL+ITTRKS
Sbjct: 14  GLEESPEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKS 73

Query: 389 PCGEGTNTFDRFELRVHKRVIDLFSSPEVVKQITSITIEPGVEVEVTIADS 237
           PCGEGTNT+DRFELRVHKRVIDLFSSP+VVKQITSITIEPGVEVEVTIADS
Sbjct: 74  PCGEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIADS 124


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