BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001438
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD63027.1| photosystem II protein M [Potamophila parviflora]       84   2e-14
gb|AAS46110.1| photosystem II M protein [Oryza sativa Japonica G...    84   2e-14
gb|ADD63094.1| photosystem II protein M [Microlaena stipoides]         78   1e-12
ref|XP_003605618.1| Photosystem II reaction center protein M [Me...    72   9e-11
ref|YP_398315.1| photosystem II reaction center M protein [Lactu...    67   3e-09

>gb|ADD63027.1| photosystem II protein M [Potamophila parviflora]
          Length = 69

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 44/52 (84%), Positives = 46/52 (88%)
 Frame = -2

Query: 366 SLWDQIPSYCEVKKNDEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQNN 211
           S WD IPSYCE K   E+MEVNILAFIATALFILVPTAFLLIIYVKTVSQN+
Sbjct: 21  SPWDYIPSYCEKK---EVMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 69


>gb|AAS46110.1| photosystem II M protein [Oryza sativa Japonica Group]
           gi|42795608|gb|AAS46173.1| photosystem II M protein
           [Oryza sativa Japonica Group]
           gi|290790563|gb|ADD62823.1| photosystem II protein M
           [Oryza sativa Japonica Group]
           gi|290790632|gb|ADD62891.1| photosystem II protein M
           [Oryza meridionalis] gi|290790701|gb|ADD62959.1|
           photosystem II protein M [Oryza australiensis]
          Length = 69

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 44/52 (84%), Positives = 46/52 (88%)
 Frame = -2

Query: 366 SLWDQIPSYCEVKKNDEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQNN 211
           S WD IPSYCE K   E+MEVNILAFIATALFILVPTAFLLIIYVKTVSQN+
Sbjct: 21  SPWDYIPSYCEKK---EVMEVNILAFIATALFILVPTAFLLIIYVKTVSQND 69


>gb|ADD63094.1| photosystem II protein M [Microlaena stipoides]
          Length = 69

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 42/52 (80%), Positives = 44/52 (84%)
 Frame = -2

Query: 366 SLWDQIPSYCEVKKNDEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQNN 211
           S WD IPSY E K   E+MEVNILAFIATALFILVPTAFLLIIYVKT SQN+
Sbjct: 21  SPWDYIPSYYEKK---EVMEVNILAFIATALFILVPTAFLLIIYVKTASQND 69


>ref|XP_003605618.1| Photosystem II reaction center protein M [Medicago truncatula]
           gi|355506673|gb|AES87815.1| Photosystem II reaction
           center protein M [Medicago truncatula]
          Length = 164

 Score = 71.6 bits (174), Expect = 9e-11
 Identities = 40/53 (75%), Positives = 44/53 (83%), Gaps = 1/53 (1%)
 Frame = -2

Query: 366 SLWDQIPSYC-EVKKNDEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQNN 211
           S W QI     + K+N EIMEVNILAFIATALFILVPTAFLLIIYVKTVSQ++
Sbjct: 112 SRWIQIQKISIDFKENIEIMEVNILAFIATALFILVPTAFLLIIYVKTVSQSD 164


>ref|YP_398315.1| photosystem II reaction center M protein [Lactuca sativa]
           gi|91983986|ref|YP_567070.1| photosystem II protein M
           [Vitis vinifera] gi|116617102|ref|YP_817476.1|
           photosystem II protein M [Coffea arabica]
           gi|139389636|ref|YP_001123193.1| PSII low MW protein
           [Arabis hirsuta] gi|139389944|ref|YP_001123544.1| PSII
           low MW protein [Draba nemorosa]
           gi|139390146|ref|YP_001123719.1| photosystem II protein
           M [Lobularia maritima] gi|170784766|ref|YP_001718682.1|
           photosystem II protein M [Trachelium caeruleum]
           gi|194033138|ref|YP_002000476.1| photosystem II protein
           M [Brachypodium distachyon]
           gi|334702311|ref|YP_004465174.1| photosystem II protein
           M [Jacobaea vulgaris] gi|383930486|ref|YP_005089946.1|
           psbM gene product (chloroplast) [Brassica napus]
           gi|441403278|ref|YP_007353752.1| photosystem II M
           protein (chloroplast) [Chrysanthemum x morifolium]
           gi|452849037|ref|YP_007474715.1| PsbM (chloroplast)
           [Chrysanthemum indicum]
           gi|68052415|sp|Q56P14.1|PSBM_LACSA RecName:
           Full=Photosystem II reaction center protein M;
           Short=PSII-M gi|122153615|sp|A0A329.1|PSBM_COFAR
           RecName: Full=Photosystem II reaction center protein M;
           Short=PSII-M gi|122236500|sp|Q0ZJ26.1|PSBM_VITVI
           RecName: Full=Photosystem II reaction center protein M;
           Short=PSII-M gi|172044404|sp|A4QK12.1|PSBM_ARAHI
           RecName: Full=Photosystem II reaction center protein M;
           Short=PSII-M gi|172044412|sp|A4QL13.1|PSBM_DRANE
           RecName: Full=Photosystem II reaction center protein M;
           Short=PSII-M gi|172044416|sp|A4QLI8.1|PSBM_LOBMA
           RecName: Full=Photosystem II reaction center protein M;
           Short=PSII-M gi|61992020|gb|AAX58141.1| PSII M protein
           [Lactuca sativa] gi|78675154|dbj|BAE47580.1| photosystem
           II reaction center M protein [Lactuca sativa]
           gi|88656969|gb|ABD47219.1| photosystem II protein M
           [Lactuca sativa] gi|91701644|gb|ABE47528.1| photosystem
           II protein M [Vitis vinifera]
           gi|116242158|gb|ABJ89673.1| photosystem II protein M
           [Coffea arabica] gi|134286391|dbj|BAF50017.1| PSII low
           MW protein [Arabis hirsuta] gi|134286746|dbj|BAF50368.1|
           PSII low MW protein [Draba nemorosa]
           gi|134286923|dbj|BAF50543.1| PSII low MW protein
           [Lobularia maritima] gi|156598802|gb|ABU85654.1|
           photosystem II protein M [Trachelium caeruleum]
           gi|157267514|gb|ABV26507.1| photosystem II protein M
           (chloroplast) [Trachelium caeruleum]
           gi|193075546|gb|ACF08629.1| PSII low MW protein
           (chloroplast) [Brachypodium distachyon]
           gi|262400783|gb|ACY66272.1| photosystem II protein M
           [Brassica napus] gi|290488102|gb|ADD30435.1| photosystem
           II protein M [Heuchera sanguinea]
           gi|308156069|gb|ADO15397.1| photosystem II protein M
           [Jacobaea vulgaris] gi|321575521|gb|ADW94825.1| PsbM
           [Streptocarpus montigena] gi|321575524|gb|ADW94827.1|
           PsbM [Streptocarpus montigena]
           gi|321575527|gb|ADW94829.1| PsbM [Streptocarpus
           montigena] gi|321575530|gb|ADW94831.1| PsbM
           [Streptocarpus montigena] gi|372863192|gb|AEX99264.1|
           PsbM (chloroplast) [Chrysanthemum indicum]
           gi|372863431|gb|AEX99500.1| photosystem II M protein
           (chloroplast) [Chrysanthemum indicum]
           gi|374962492|gb|AFA26834.1| photosystem II protein M
           [Abolboda macrostachya] gi|374962520|gb|AFA26848.1|
           photosystem II protein M, partial [Flagellaria indica]
           gi|375298821|gb|AFA45260.1| photosystem II M protein
           (chloroplast) [Chrysanthemum x morifolium]
          Length = 34

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = -2

Query: 312 MEVNILAFIATALFILVPTAFLLIIYVKTVSQNN 211
           MEVNILAFIATALFILVPTAFLLIIYVKTVSQNN
Sbjct: 1   MEVNILAFIATALFILVPTAFLLIIYVKTVSQNN 34