BLASTX nr result

ID: Lithospermum22_contig00001416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001416
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycin...    71   2e-10
ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|2235369...    70   5e-10
ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215...    69   9e-10
ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago t...    69   1e-09
ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256...    69   1e-09

>ref|NP_001235732.1| uncharacterized protein LOC100526902 [Glycine max]
           gi|255631115|gb|ACU15923.1| unknown [Glycine max]
          Length = 176

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 39/86 (45%), Positives = 41/86 (47%)
 Frame = -2

Query: 768 FGFVTFDXXXXXXXXXXXMNGLDLDGRAITVDKASPGQXXXXXXXXXXXXXXXXXXXXXX 589
           FGFVTFD           MNG+DLDGR ITVD+A P Q                      
Sbjct: 50  FGFVTFDDKKAMDEAIDAMNGMDLDGRTITVDRAQPQQGSTGGDGDRYRDCGRDRDRDHG 109

Query: 588 XXXXXXXXXGECFKCGKPGHFARECP 511
                    GECFKCGKPGHFARECP
Sbjct: 110 GGGGRGSNGGECFKCGKPGHFARECP 135


>ref|XP_002523766.1| dc50, putative [Ricinus communis] gi|223536978|gb|EEF38615.1| dc50,
           putative [Ricinus communis]
          Length = 210

 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 54/160 (33%), Positives = 58/160 (36%), Gaps = 3/160 (1%)
 Frame = -2

Query: 768 FGFVTFDXXXXXXXXXXXMNGLDLDGRAITVDKASP--GQXXXXXXXXXXXXXXXXXXXX 595
           FGFVTFD           MNG+DLDGR ITVDKA P  G                     
Sbjct: 50  FGFVTFDEKKAMEEAIEEMNGMDLDGRTITVDKAQPHQGSGREHDGDRNRDRGRDRDQNR 109

Query: 594 XXXXXXXXXXXGECFKCGKPGHFARECPXXXXXXXXXXXXXXXXXXXXGAGRDGSRFGPE 415
                      GECFKCGKPGHFARECP                    G G  G R+GP+
Sbjct: 110 DHGGRRPSGGGGECFKCGKPGHFARECPSEGAKGSRYGGRDDRYSGGGGGG--GGRYGPD 167

Query: 414 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXGPYDRRSGGGF 298
                                        GPY+RR  GGF
Sbjct: 168 RNGDRFGGRNKDAGSRGGPGTDRYNRDRSGPYERRGSGGF 207


>ref|XP_004136860.1| PREDICTED: uncharacterized protein LOC101215898 [Cucumis sativus]
           gi|449478936|ref|XP_004155458.1| PREDICTED:
           uncharacterized protein LOC101227324 [Cucumis sativus]
          Length = 211

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 53/160 (33%), Positives = 59/160 (36%), Gaps = 3/160 (1%)
 Frame = -2

Query: 768 FGFVTFDXXXXXXXXXXXMNGLDLDGRAITVDKASP--GQXXXXXXXXXXXXXXXXXXXX 595
           FGFVTFD           MNG+DLDGR+ITVDKA P  G                     
Sbjct: 50  FGFVTFDEKKAMDEAIKAMNGMDLDGRSITVDKAQPNQGSGRDHDGDRPRGGRDHDRDRG 109

Query: 594 XXXXXXXXXXXGECFKCGKPGHFARECPXXXXXXXXXXXXXXXXXXXXGAGRDGSRFGPE 415
                      G+CFKCGKPGHFARECP                    G G  G R+GP+
Sbjct: 110 RDFGGARGSNSGDCFKCGKPGHFARECPSEGGRGGGRYGGRDDKYSGGGGG-GGGRYGPD 168

Query: 414 -XXXXXXXXXXXXXXXXXXXXXXXXXXXXGPYDRRSGGGF 298
                                        GPY+RR  GGF
Sbjct: 169 RNGDRFGGRNRSSGDRGGSGSDRYSRDRSGPYERRGSGGF 208


>ref|XP_003593133.1| Glycine-rich RNA-binding protein [Medicago truncatula]
           gi|355482181|gb|AES63384.1| Glycine-rich RNA-binding
           protein [Medicago truncatula]
          Length = 491

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 40/87 (45%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = -2

Query: 768 FGFVTFDXXXXXXXXXXXMNGLDLDGRAITVDKASP-GQXXXXXXXXXXXXXXXXXXXXX 592
           FGFVTFD           MNG+DLDGR ITVDKA P G                      
Sbjct: 272 FGFVTFDDKEAMEEAIEAMNGIDLDGRTITVDKAQPQGSRDDDDRHRERGRDSRDRNRSR 331

Query: 591 XXXXXXXXXXGECFKCGKPGHFARECP 511
                     GECFKCGKPGHFARECP
Sbjct: 332 DYGGSRGSNGGECFKCGKPGHFARECP 358


>ref|XP_002264022.1| PREDICTED: uncharacterized protein LOC100256416 isoform 1 [Vitis
           vinifera] gi|359493015|ref|XP_003634493.1| PREDICTED:
           uncharacterized protein LOC100256416 isoform 2 [Vitis
           vinifera]
          Length = 207

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 43/123 (34%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
 Frame = -2

Query: 768 FGFVTFDXXXXXXXXXXXMNGLDLDGRAITVDKASPGQXXXXXXXXXXXXXXXXXXXXXX 589
           FGFV+FD           M+G+DLDGR+ITVDKA P Q                      
Sbjct: 50  FGFVSFDDKQAMEDAIKEMHGMDLDGRSITVDKAQPNQGSGRDRDGDRDRDRGRDRYNDR 109

Query: 588 XXXXXXXXXG-----ECFKCGKPGHFARECPXXXXXXXXXXXXXXXXXXXXGAGRDGSRF 424
                          ECFKCGKPGHFARECP                    G G  G R+
Sbjct: 110 DRNRDYGGGRGSNGGECFKCGKPGHFARECPSSEGARGGRYGGRDDKYGGGGGGGSGGRY 169

Query: 423 GPE 415
           GP+
Sbjct: 170 GPD 172


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