BLASTX nr result

ID: Lithospermum22_contig00001367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001367
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana taba...   154   5e-35
ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cuc...   143   6e-32
ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding prote...   143   6e-32
ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putati...   143   6e-32
gb|AFK45871.1| unknown [Medicago truncatula]                          142   1e-31

>emb|CAA70700.1| transformer-SR ribonucleoprotein [Nicotiana tabacum]
          Length = 235

 Score =  154 bits (388), Expect = 5e-35
 Identities = 76/100 (76%), Positives = 84/100 (84%)
 Frame = -2

Query: 828 EAVNPGNTLYVTGLSTRVTEQDLQEHFSKQGKVKSIFLVMEPRSRVSRGFAFITMDSLED 649
           E  NPGNTLYVTGLSTRVTE+DL+EHFSK+GKVKS+FLV+EPRSR+SRGFAFITMDSLED
Sbjct: 60  EVSNPGNTLYVTGLSTRVTERDLEEHFSKEGKVKSVFLVVEPRSRISRGFAFITMDSLED 119

Query: 648 ADRCIKHLNQSVMEGRYIXXXXXXXXXXXXXXPGHYLGLK 529
           A+RCIKHLNQSV+EGRYI              PGHYLGLK
Sbjct: 120 ANRCIKHLNQSVLEGRYITVEKSRRKRARTPTPGHYLGLK 159


>ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus]
          Length = 244

 Score =  143 bits (361), Expect = 6e-32
 Identities = 68/99 (68%), Positives = 82/99 (82%)
 Frame = -2

Query: 825 AVNPGNTLYVTGLSTRVTEQDLQEHFSKQGKVKSIFLVMEPRSRVSRGFAFITMDSLEDA 646
           A NPGNTLYVTGLSTRVTE+DL+EHFSK+GKV S FLV+EPR+R+SRGFAF+TMD+++DA
Sbjct: 60  ANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 119

Query: 645 DRCIKHLNQSVMEGRYIXXXXXXXXXXXXXXPGHYLGLK 529
           +RC+KHLNQS++EGRYI              PGHYLGLK
Sbjct: 120 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLK 158


>ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like,
           partial [Cucumis sativus]
          Length = 238

 Score =  143 bits (361), Expect = 6e-32
 Identities = 68/99 (68%), Positives = 82/99 (82%)
 Frame = -2

Query: 825 AVNPGNTLYVTGLSTRVTEQDLQEHFSKQGKVKSIFLVMEPRSRVSRGFAFITMDSLEDA 646
           A NPGNTLYVTGLSTRVTE+DL+EHFSK+GKV S FLV+EPR+R+SRGFAF+TMD+++DA
Sbjct: 54  ANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 113

Query: 645 DRCIKHLNQSVMEGRYIXXXXXXXXXXXXXXPGHYLGLK 529
           +RC+KHLNQS++EGRYI              PGHYLGLK
Sbjct: 114 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLK 152


>ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223529816|gb|EEF31751.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 248

 Score =  143 bits (361), Expect = 6e-32
 Identities = 69/100 (69%), Positives = 83/100 (83%)
 Frame = -2

Query: 828 EAVNPGNTLYVTGLSTRVTEQDLQEHFSKQGKVKSIFLVMEPRSRVSRGFAFITMDSLED 649
           EAVNPGNTLYVTGLSTRVTE+ L+EHF+K+GKV S FLV+EPR+R+SRGFAF+TMD++ED
Sbjct: 68  EAVNPGNTLYVTGLSTRVTERGLEEHFAKEGKVASCFLVVEPRTRISRGFAFVTMDNVED 127

Query: 648 ADRCIKHLNQSVMEGRYIXXXXXXXXXXXXXXPGHYLGLK 529
           A+RC+K+LNQSV+EGRYI              PGHYLGLK
Sbjct: 128 ANRCVKYLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLK 167


>gb|AFK45871.1| unknown [Medicago truncatula]
          Length = 270

 Score =  142 bits (359), Expect = 1e-31
 Identities = 69/99 (69%), Positives = 81/99 (81%)
 Frame = -2

Query: 825 AVNPGNTLYVTGLSTRVTEQDLQEHFSKQGKVKSIFLVMEPRSRVSRGFAFITMDSLEDA 646
           A NPGNTLYVTGLS+RVT++DL++HFSK+GKV S FLV+EPR+R+SRGFAF+TMDS EDA
Sbjct: 57  ATNPGNTLYVTGLSSRVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDSHEDA 116

Query: 645 DRCIKHLNQSVMEGRYIXXXXXXXXXXXXXXPGHYLGLK 529
           +RCIKHLNQSV+EGRYI              PGHYLGLK
Sbjct: 117 ERCIKHLNQSVLEGRYITVERSRRKRARTPTPGHYLGLK 155


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