BLASTX nr result

ID: Lithospermum22_contig00001366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001366
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation...    91   7e-17
ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation...    90   2e-16
ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation...    89   5e-16
ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation...    84   1e-14
ref|NP_199245.1| translation initiation factor eIF-3 subunit 7 [...    84   2e-14

>ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Cucumis sativus]
           gi|449506762|ref|XP_004162841.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit D-like [Cucumis
           sativus]
          Length = 566

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/91 (52%), Positives = 56/91 (61%), Gaps = 11/91 (12%)
 Frame = +1

Query: 163 GFELGSVPFNNDGWGPPDSTS-----------IPFASFSRSEKLGRIADWTRALSNPTRP 309
           GFE+G+VP+N DGWGPPDST+           +PFA FSRS+KLGRIADWTR ++NP RP
Sbjct: 4   GFEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRP 63

Query: 310 KQPXXXXXXXXXXXXXXTLAADEDSSFRLVD 402
           K                   ADED SFRLVD
Sbjct: 64  KTASDSVFDFTNDDSFPA-NADEDMSFRLVD 93


>ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Vitis vinifera]
          Length = 567

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/92 (53%), Positives = 58/92 (63%), Gaps = 12/92 (13%)
 Frame = +1

Query: 163 GFELGSVPFNNDGWGPPDSTS---------IPFASFSRSEKLGRIADWTRALSNPTRP-- 309
           GFE+G+VPFN DGWGPP+S S         +PFA FSRS+KLGRIADWTR  +NP+R   
Sbjct: 4   GFEVGAVPFNPDGWGPPESASPHLPNHPINVPFAPFSRSDKLGRIADWTRTYNNPSRNPL 63

Query: 310 KQPXXXXXXXXXXXXXXT-LAADEDSSFRLVD 402
           + P                +AADEDSSFRLVD
Sbjct: 64  RNPSDSVFDFTGDDSFGAGIAADEDSSFRLVD 95


>ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like isoform 1 [Glycine max]
           gi|356555340|ref|XP_003545991.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit D-like isoform 2
           [Glycine max]
          Length = 565

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/90 (50%), Positives = 56/90 (62%), Gaps = 11/90 (12%)
 Frame = +1

Query: 166 FELGSVPFNNDGWGPPDSTS-----------IPFASFSRSEKLGRIADWTRALSNPTRPK 312
           F++G+VPFN DGWGPPD+ +           +PFA FSRS+KLGRIADWTR  +NPTR K
Sbjct: 5   FDIGAVPFNADGWGPPDNATSGSNNNNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSK 64

Query: 313 QPXXXXXXXXXXXXXXTLAADEDSSFRLVD 402
            P                +AD+D+SFRLVD
Sbjct: 65  NPADAVFDFANDDSFPA-SADDDASFRLVD 93


>ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Glycine max]
          Length = 557

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 43/89 (48%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
 Frame = +1

Query: 166 FELGSVPFNNDGWGPPDST----------SIPFASFSRSEKLGRIADWTRALSNPTRPKQ 315
           F++G+VPFN +GWGPPDST          ++PFA FSRS+KLGRIADWTR  +NPTR K 
Sbjct: 5   FDIGAVPFNAEGWGPPDSTITGSNINLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKN 64

Query: 316 PXXXXXXXXXXXXXXTLAADEDSSFRLVD 402
           P                  D+D +F LVD
Sbjct: 65  PADAVFDFTND--------DDDDTFHLVD 85


>ref|NP_199245.1| translation initiation factor eIF-3 subunit 7 [Arabidopsis
           thaliana] gi|10176887|dbj|BAB10117.1| eukaryotic
           translation initiation factor 3 subunit 7 [Arabidopsis
           thaliana] gi|30793851|gb|AAP40378.1| putative eukaryotic
           translation initiation factor 3 subunit 7 [Arabidopsis
           thaliana] gi|30794001|gb|AAP40450.1| putative eukaryotic
           translation initiation factor 3 subunit 7 [Arabidopsis
           thaliana] gi|332007713|gb|AED95096.1| translation
           initiation factor eIF-3 subunit 7 [Arabidopsis thaliana]
          Length = 588

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 26/105 (24%)
 Frame = +1

Query: 166 FELGSVPFNNDGWGPPDST--------------SIPFASFSRSEKLGRIADWTRALSNPT 303
           FE+G+VPFN+DGWGPPD++              ++PFASFSRSEKLGR+ADWTRALSNP+
Sbjct: 6   FEVGTVPFNSDGWGPPDASDTSSTSVAAANLLPNVPFASFSRSEKLGRVADWTRALSNPS 65

Query: 304 -RPKQPXXXXXXXXXXXXXXTL-----------AADEDSSFRLVD 402
            RP                  +            ADED++FRLVD
Sbjct: 66  ARPHTGSKSDPSAIFDFSAFAVDEGFGLTNSGGNADEDAAFRLVD 110


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