BLASTX nr result

ID: Lithospermum22_contig00001346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001346
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation...    96   4e-18
ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation...    92   4e-17
ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation...    92   4e-17
ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation...    88   8e-16
gb|ACJ85719.1| unknown [Medicago truncatula]                           86   2e-15

>ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Cucumis sativus]
           gi|449506762|ref|XP_004162841.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit D-like [Cucumis
           sativus]
          Length = 566

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/91 (54%), Positives = 58/91 (63%), Gaps = 11/91 (12%)
 Frame = -1

Query: 319 GFELGSVPFNNDGWGPPDSTST-----------PFAPFSRSEKLGRIADWTRSLSNPTRP 173
           GFE+G+VP+N DGWGPPDST+T           PFAPFSRS+KLGRIADWTR+++NP RP
Sbjct: 4   GFEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRP 63

Query: 172 KQPXXXXXXXXXXXXXATLAADEDSSFRLVD 80
           K                   ADED SFRLVD
Sbjct: 64  KTASDSVFDFTNDDSFPA-NADEDMSFRLVD 93


>ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Vitis vinifera]
          Length = 567

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 50/92 (54%), Positives = 59/92 (64%), Gaps = 12/92 (13%)
 Frame = -1

Query: 319 GFELGSVPFNNDGWGPPDSTS---------TPFAPFSRSEKLGRIADWTRSLSNPTRP-- 173
           GFE+G+VPFN DGWGPP+S S          PFAPFSRS+KLGRIADWTR+ +NP+R   
Sbjct: 4   GFEVGAVPFNPDGWGPPESASPHLPNHPINVPFAPFSRSDKLGRIADWTRTYNNPSRNPL 63

Query: 172 KQPXXXXXXXXXXXXXAT-LAADEDSSFRLVD 80
           + P                +AADEDSSFRLVD
Sbjct: 64  RNPSDSVFDFTGDDSFGAGIAADEDSSFRLVD 95


>ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like isoform 1 [Glycine max]
           gi|356555340|ref|XP_003545991.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit D-like isoform 2
           [Glycine max]
          Length = 565

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 11/90 (12%)
 Frame = -1

Query: 316 FELGSVPFNNDGWGPPDSTST-----------PFAPFSRSEKLGRIADWTRSLSNPTRPK 170
           F++G+VPFN DGWGPPD+ ++           PFAPFSRS+KLGRIADWTR+ +NPTR K
Sbjct: 5   FDIGAVPFNADGWGPPDNATSGSNNNNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSK 64

Query: 169 QPXXXXXXXXXXXXXATLAADEDSSFRLVD 80
            P                +AD+D+SFRLVD
Sbjct: 65  NPADAVFDFANDDSFPA-SADDDASFRLVD 93


>ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           D-like [Glycine max]
          Length = 557

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 45/89 (50%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
 Frame = -1

Query: 316 FELGSVPFNNDGWGPPDSTST----------PFAPFSRSEKLGRIADWTRSLSNPTRPKQ 167
           F++G+VPFN +GWGPPDST T          PFAPFSRS+KLGRIADWTR+ +NPTR K 
Sbjct: 5   FDIGAVPFNAEGWGPPDSTITGSNINLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRSKN 64

Query: 166 PXXXXXXXXXXXXXATLAADEDSSFRLVD 80
           P                  D+D +F LVD
Sbjct: 65  PADAVFDFTND--------DDDDTFHLVD 85


>gb|ACJ85719.1| unknown [Medicago truncatula]
          Length = 297

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 47/86 (54%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
 Frame = -1

Query: 316 FELGSVPFNNDGWGP----PDSTSTPFAPFSRSEKLGRIADWTRSL---SNPTRPKQPXX 158
           F+LG+VPFN DGWGP     D+T+ PFAPFSRS+KLGRIADWTR+    +NP R K P  
Sbjct: 7   FDLGAVPFNPDGWGPLESTADNTNVPFAPFSRSDKLGRIADWTRNFNNNNNPNRSKNPAD 66

Query: 157 XXXXXXXXXXXATLAADEDSSFRLVD 80
                         A D DSSFRLVD
Sbjct: 67  TAFDFTSDPSFPNFAED-DSSFRLVD 91


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