BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001176
         (2455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268594.2| PREDICTED: ATP-dependent Clp protease ATP-bi...   645   0.0  
ref|XP_002452300.1| hypothetical protein SORBIDRAFT_04g023280 [S...   601   e-169
dbj|BAA98151.1| CLP protease regulatory subunit CLPX-like [Arabi...   597   e-168
ref|XP_002864018.1| hypothetical protein ARALYDRAFT_495043 [Arab...   594   e-167
ref|NP_568714.4| ATP-dependent Clp protease [Arabidopsis thalian...   594   e-167

>ref|XP_002268594.2| PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpX-like
            [Vitis vinifera]
          Length = 637

 Score =  645 bits (1665), Expect = 0.0
 Identities = 355/578 (61%), Positives = 417/578 (72%), Gaps = 24/578 (4%)
 Frame = +1

Query: 319  LNIGFGYQERFKWDG-SSDKYDQIKAEMNCPRCNKLMNVIFSNRPLSIAAREE-GVFQAV 492
            L+ GF +Q R K D  S D YD I+A++NCPRC+  M+++FSNRPLSI A E  GV+QA+
Sbjct: 61   LSPGF-HQRRLKSDKYSGDTYDHIRADVNCPRCSSQMSILFSNRPLSITAAEPPGVYQAL 119

Query: 493  NFCPKCRTAFYFRPFKIEPLQGTFIEIGRVKERLEVDKCGGFRDERVKG-GVKMWERLRS 669
            N CP CRTAFYFRPFK+ PLQG+FIEIGR K     DK GG       G GV +WE+LR 
Sbjct: 120  NLCPNCRTAFYFRPFKLAPLQGSFIEIGRFK-----DKDGGGGGGGGGGRGVPIWEKLRL 174

Query: 670  YGSGNLXXXXXXXXXXXXXXKDKGFFH-----------------GKELPTPKEIVKGLDG 798
            YG G                +D+G                    G+ELPTPKEI KGLD 
Sbjct: 175  YGGGE-------GGEGEAGVRDEGVVVVGGGAPGGGSGWGGANLGRELPTPKEICKGLDE 227

Query: 799  FVVGQEKAKKVLSVAVYNHYKRIYHSSSYTESHVVSDKFGTEFENDNGDCVELEKSNVLL 978
            FV+GQE+AKKVLSVAVYNHYKRI+H+S   ES   S K   E +ND+ D VELEKSNVLL
Sbjct: 228  FVIGQEQAKKVLSVAVYNHYKRIHHASLQKESGAESTK--AEIDNDDNDSVELEKSNVLL 285

Query: 979  MGPTGSGKTLLAKTLARIVNVPFVIADATTLTQAGYVGEDAESILYKLLTAADFDIEAAQ 1158
            +GPTGSGKTLLAKTLAR+VNVPFVIADATTLTQA YVGED ESIL+KLL  A+F++EAAQ
Sbjct: 286  LGPTGSGKTLLAKTLARVVNVPFVIADATTLTQASYVGEDVESILHKLLMVAEFNVEAAQ 345

Query: 1159 QGIVYIDEIDKITKKDENLDIGRDVSGEGVQQSLLKMLEG--SIVNVPDNSSLRNQRGDS 1332
            QGIVYIDE+DKITKK E+L+ GRDVSGEGVQQ+LLKMLEG  SIVNVPD    ++ RGD+
Sbjct: 346  QGIVYIDEVDKITKKAESLNTGRDVSGEGVQQALLKMLEGTVSIVNVPDKGGRKHPRGDN 405

Query: 1333 IQIDTKDILFICGGAFIDLEKTILERRQDASIGFGAPVRAKMRRGDPTEAAITXXXXXXX 1512
            IQIDTKDILFICGGAF+DLEKTI ERRQD+SIGFGAPVRA MR G  T+A +T       
Sbjct: 406  IQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMRTGGLTDAVVTSSLLESV 465

Query: 1513 XXXXXTAHGLIPEFVGRFPVLVSLAALNEDQLIQVLTKPKNALCKQYKRMFGMNNVKLQF 1692
                  A+GLIPEF+GRFP+LVSL+ALNEDQL+QVLT+PKNAL KQYK+M  MNNVKL F
Sbjct: 466  ESGDLIAYGLIPEFIGRFPILVSLSALNEDQLVQVLTEPKNALGKQYKKMLSMNNVKLHF 525

Query: 1693 TXXXXXXXXXXXXSKNTGARGLRAILESVLTEAMFEVPDATSGN--IDLILVDEEAVGQG 1866
            T            +KNTGAR LRAILE +LTEAMFE+PD  +G   +D +LVDEEAV   
Sbjct: 526  TENALRLIAKKAIAKNTGARSLRAILEKILTEAMFEIPDVKTGTDMVDAVLVDEEAVESI 585

Query: 1867 EKPGCGAKILSGDNKLVQFALQTKKSSDAVSDETGEDI 1980
            E+ GCGAK+L G+  L QF  +TK S+    DE  +++
Sbjct: 586  EEQGCGAKVLRGEGALEQFLHETKSSNPLGRDEMAQEL 623


>ref|XP_002452300.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
            gi|241932131|gb|EES05276.1| hypothetical protein
            SORBIDRAFT_04g023280 [Sorghum bicolor]
          Length = 640

 Score =  601 bits (1549), Expect = e-169
 Identities = 333/597 (55%), Positives = 409/597 (68%), Gaps = 48/597 (8%)
 Frame = +1

Query: 340  QERFKWDGSSD----------------KYDQIKAEMNCPRCNKLMNVIFSNR---PLSIA 462
            QER KW+ SS                 +  +I+AE +CPRC+K M+++FS+R   P +  
Sbjct: 42   QERRKWESSSSGSGSGGSSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPPTTAG 101

Query: 463  AREEGVFQAVNFCPKCRTAFYFRPFKIEPLQGTFIEIGRVKERL---------------E 597
            A   G +QA+N CP CR+A++FRP  + PLQGTF+EIGRV+  L                
Sbjct: 102  AGAAGGYQALNLCPNCRSAYFFRPHVLAPLQGTFVEIGRVRADLLDHPAARARDPIFWEA 161

Query: 598  VDKCGGFRDERVKGGVKMW-----------ERLRSYGSGNLXXXXXXXXXXXXXXKDKGF 744
            +      RD+   GGV +              +R  GSG                +  G 
Sbjct: 162  IRASSSSRDDGDGGGVAVHVPPGPPFHPNLNVVRVAGSGGGGGGGGGAGEEGAGKEGWGG 221

Query: 745  FH-GKELPTPKEIVKGLDGFVVGQEKAKKVLSVAVYNHYKRIYHSSSYTESHVVSDKFGT 921
             + G++LPTPKEI KGLD +V+GQ++AKKVLSVAVYNHYKRIYH S    S   +D  G 
Sbjct: 222  SNLGRDLPTPKEICKGLDKYVIGQDRAKKVLSVAVYNHYKRIYHQSLQKGSG--ADLGGF 279

Query: 922  EFENDNGDCVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATTLTQAGYVGEDA 1101
            + E D+ D VELEKSNVLLMGPTGSGKTLLAKTLAR VNVPFVIADATTLTQAGYVGED 
Sbjct: 280  DGEADDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDV 339

Query: 1102 ESILYKLLTAADFDIEAAQQGIVYIDEIDKITKKDENLDIGRDVSGEGVQQSLLKMLEGS 1281
            ESILYKLLT ADF+++AAQQG+VYIDE+DKITKK E+L+I RDVSGEGVQQ+LLKMLEG+
Sbjct: 340  ESILYKLLTVADFNVQAAQQGMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT 399

Query: 1282 IVNVPDNSSLRNQRGDSIQIDTKDILFICGGAFIDLEKTILERRQDASIGFGAPVRAKMR 1461
            IVNVP+  + ++ RGD+IQIDTKDILFICGGAF+DLEKTI ERRQD+SIGFGAPVRA MR
Sbjct: 400  IVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDLEKTISERRQDSSIGFGAPVRANMR 459

Query: 1462 RGDPTEAAITXXXXXXXXXXXXTAHGLIPEFVGRFPVLVSLAALNEDQLIQVLTKPKNAL 1641
             G  + A +T             A+GLIPEF+GRFP+LVSLAALNEDQL+QVLT+PKNAL
Sbjct: 460  AGGISSAQVTSSLLESVESGDLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLTEPKNAL 519

Query: 1642 CKQYKRMFGMNNVKLQFTXXXXXXXXXXXXSKNTGARGLRAILESVLTEAMFEVPDATSG 1821
             KQ+K++F MNNVKL FT            SKNTGARGLR ILE++L ++M+E+PDA SG
Sbjct: 520  GKQFKKLFSMNNVKLHFTDGALRIIAKKAMSKNTGARGLRTILETILMDSMYEIPDARSG 579

Query: 1822 --NIDLILVDEEAVGQGEKPGCGAKILSGDNKLVQFALQTKKSSDAVSDETGEDIDK 1986
               ID ++VDE+AVG  ++PGCGAKIL GD  L Q+  Q K S D V+ E   + ++
Sbjct: 580  EKRIDAVVVDEDAVGSVDQPGCGAKILYGDGALDQYLSQIKVSGDGVASEMDGETER 636


>dbj|BAA98151.1| CLP protease regulatory subunit CLPX-like [Arabidopsis thaliana]
          Length = 608

 Score =  597 bits (1538), Expect = e-168
 Identities = 324/542 (59%), Positives = 388/542 (71%), Gaps = 7/542 (1%)
 Frame = +1

Query: 361  GSSDKYDQIKAEMNCPRCNKLMNVIFSNRPLSIAAREEGVFQAVNFCPKCRTAFYFRPFK 540
            G  D YD I++++NCPRC+  M+VIFSNRPLS+ ARE G++QAVNFC +C+TAFYFRPFK
Sbjct: 69   GGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCKTAFYFRPFK 128

Query: 541  IEPLQGTFIEIGRVKERLEVDKCGGFRDERVKGGVKMW--ERLRSYGSGNLXXXXXXXXX 714
            + PLQG+FIE+G+VK     D      D+  K   + W  + LRS   G           
Sbjct: 129  LSPLQGSFIELGKVKG---TDDDHDDDDDDQKSFPRNWKIQGLRSDEDGEDADEEEDESN 185

Query: 715  XXXXXKDKGFFHGKELPTPKEIVKGLDGFVVGQEKAKKVLSVAVYNHYKRIYHSSSYTES 894
                 K        +LPTPKEI +GLD FV+GQEKAKKVLSVAVYNHYKRIYH+S    S
Sbjct: 186  GGDKEKQSVI----KLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGS 241

Query: 895  HVVSDKFGTEFENDNGDCVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATTLT 1074
               S+ +  + E+DN D VEL+KSNVLL+GPTGSGKTLLAKTLARIVNVPF IADAT+LT
Sbjct: 242  --ASESYNIDMEDDNIDHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLT 299

Query: 1075 QAGYVGEDAESILYKLLTAADFDIEAAQQGIVYIDEIDKITKKDENLDIGRDVSGEGVQQ 1254
            QAGYVGED ESILYKL   A  ++E AQ+GIVYIDE+DK+T K  + + GRDVSGEGVQQ
Sbjct: 300  QAGYVGEDVESILYKLYVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQ 359

Query: 1255 SLLKMLEGSIVNVP--DNSSLRNQRGDSIQIDTKDILFICGGAFIDLEKTILERRQDASI 1428
            SLLK+LEG++V+VP  +    R+ RGDSIQ+DTKDILFICGGAFIDLEKT+ ER+ DASI
Sbjct: 360  SLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASI 419

Query: 1429 GFGAPVRAKMRRGDPTEAAITXXXXXXXXXXXXTAHGLIPEFVGRFPVLVSLAALNEDQL 1608
            GFGA VR  M     + AA+T             A+GLIPEFVGR P+LVSL+ALNEDQL
Sbjct: 420  GFGASVRTNMSTSGLSSAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQL 479

Query: 1609 IQVLTKPKNALCKQYKRMFGMNNVKLQFTXXXXXXXXXXXXSKNTGARGLRAILESVLTE 1788
            +QVLT+PK+AL KQYK++F MNNV+LQFT            SKNTGARGLR+ILES+LTE
Sbjct: 480  VQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTE 539

Query: 1789 AMFEVPDAT---SGNIDLILVDEEAVGQGEKPGCGAKILSGDNKLVQFALQTKKSSDAVS 1959
            AMFEVPD+    S +I  +LVDEEAVG    PGCGAKIL GDN L QF  + +    +  
Sbjct: 540  AMFEVPDSITEGSQSIKAVLVDEEAVGSVGSPGCGAKILKGDNVLQQFVEEAESKEKSKE 599

Query: 1960 DE 1965
            DE
Sbjct: 600  DE 601


>ref|XP_002864018.1| hypothetical protein ARALYDRAFT_495043 [Arabidopsis lyrata subsp.
            lyrata] gi|297309853|gb|EFH40277.1| hypothetical protein
            ARALYDRAFT_495043 [Arabidopsis lyrata subsp. lyrata]
          Length = 605

 Score =  594 bits (1532), Expect = e-167
 Identities = 325/549 (59%), Positives = 389/549 (70%), Gaps = 12/549 (2%)
 Frame = +1

Query: 355  WDGSS-------DKYDQIKAEMNCPRCNKLMNVIFSNRPLSIAAREEGVFQAVNFCPKCR 513
            WD  S       D YD I++++NCPRC+  M+VIFSNRPLS+ ARE G++QAVNFC +C+
Sbjct: 59   WDSCSGGGGRGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCK 118

Query: 514  TAFYFRPFKIEPLQGTFIEIGRVKERLEVDKCGGFRDERVKGGVKMW--ERLRSYGSGNL 687
            TAFYFRPFK+ PLQG+FIE+G+VK     D      D+  K   + W  + LRS   G  
Sbjct: 119  TAFYFRPFKLSPLQGSFIELGKVKG---TDDDHDDDDDDQKSFPRNWKIQGLRSDEDGE- 174

Query: 688  XXXXXXXXXXXXXXKDKGFFHGKELPTPKEIVKGLDGFVVGQEKAKKVLSVAVYNHYKRI 867
                          +DK      +LPTPKEI +GLD FV+GQEKAKKVLSVAVYNHYKRI
Sbjct: 175  ---DAEEDEDETNGRDKEKQSVIKLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRI 231

Query: 868  YHSSSYTESHVVSDKFGTEFENDNGDCVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPF 1047
            YH+S   +   VS     + E++N D VEL+KSNVLL+GPTGSGKTLLAKTLARIVNVPF
Sbjct: 232  YHASR--KKGFVSRSDNLDMEDENIDHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPF 289

Query: 1048 VIADATTLTQAGYVGEDAESILYKLLTAADFDIEAAQQGIVYIDEIDKITKKDENLDIGR 1227
             IADAT+LTQAGYVGED ESILYKL   A  ++E AQ+GIVYIDE+DK+T K  + + GR
Sbjct: 290  AIADATSLTQAGYVGEDVESILYKLYVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGR 349

Query: 1228 DVSGEGVQQSLLKMLEGSIVNVPDNSSLRNQRGDSIQIDTKDILFICGGAFIDLEKTILE 1407
            DVSGEGVQQSLLK+LEG++V +P+    R+ RGDSIQ+DTKDILFICGGAFIDLEKT+ E
Sbjct: 350  DVSGEGVQQSLLKLLEGTVVPIPEKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSE 409

Query: 1408 RRQDASIGFGAPVRAKMRRGDPTEAAITXXXXXXXXXXXXTAHGLIPEFVGRFPVLVSLA 1587
            R+ DASIGFGA VR  M     + AA+T             A+GLIPEFVGR P+LVSL+
Sbjct: 410  RQHDASIGFGASVRTNMSTSGFSSAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLS 469

Query: 1588 ALNEDQLIQVLTKPKNALCKQYKRMFGMNNVKLQFTXXXXXXXXXXXXSKNTGARGLRAI 1767
            ALNEDQL+QVLT+PK+AL KQYK++F MNNV+L FT            SKNTGARGLR+I
Sbjct: 470  ALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLHFTEGATRLIARKAMSKNTGARGLRSI 529

Query: 1768 LESVLTEAMFEVPDAT---SGNIDLILVDEEAVGQGEKPGCGAKILSGDNKLVQFALQTK 1938
            LES+LTEAMFEVPD+    S +I  +LVDEEAVG    PGCGAKIL GDN L QF  +T+
Sbjct: 530  LESILTEAMFEVPDSVTEGSQSIKAVLVDEEAVGSVGTPGCGAKILKGDNVLQQFVEETE 589

Query: 1939 KSSDAVSDE 1965
                   DE
Sbjct: 590  SKEKRKEDE 598


>ref|NP_568714.4| ATP-dependent Clp protease [Arabidopsis thaliana]
            gi|332008480|gb|AED95863.1| ATP-dependent Clp protease
            [Arabidopsis thaliana]
          Length = 608

 Score =  594 bits (1532), Expect = e-167
 Identities = 323/542 (59%), Positives = 387/542 (71%), Gaps = 7/542 (1%)
 Frame = +1

Query: 361  GSSDKYDQIKAEMNCPRCNKLMNVIFSNRPLSIAAREEGVFQAVNFCPKCRTAFYFRPFK 540
            G  D YD I++++NCPRC+  M+VIFSNRPLS+ ARE G++QAVNFC +C+TAFYFRPFK
Sbjct: 69   GGGDDYDHIRSDVNCPRCSAQMHVIFSNRPLSLTAREPGIYQAVNFCSQCKTAFYFRPFK 128

Query: 541  IEPLQGTFIEIGRVKERLEVDKCGGFRDERVKGGVKMW--ERLRSYGSGNLXXXXXXXXX 714
            + PLQG+FIE+G+VK     D      D+  K   + W  + LRS   G           
Sbjct: 129  LSPLQGSFIELGKVKG---TDDDHDDDDDDQKSFPRNWKIQGLRSDEDGEDADEEEDESN 185

Query: 715  XXXXXKDKGFFHGKELPTPKEIVKGLDGFVVGQEKAKKVLSVAVYNHYKRIYHSSSYTES 894
                 K        +LPTPKEI +GLD FV+GQEKAKKVLSVAVYNHYKRIYH+S    S
Sbjct: 186  GGDKEKQSVI----KLPTPKEICQGLDEFVIGQEKAKKVLSVAVYNHYKRIYHASRKKGS 241

Query: 895  HVVSDKFGTEFENDNGDCVELEKSNVLLMGPTGSGKTLLAKTLARIVNVPFVIADATTLT 1074
               S+ +  + E+DN D VEL+KSNVLL+GPTGSGKTLLAKTLARIVNVPF IADAT+LT
Sbjct: 242  --ASESYNIDMEDDNIDHVELDKSNVLLLGPTGSGKTLLAKTLARIVNVPFAIADATSLT 299

Query: 1075 QAGYVGEDAESILYKLLTAADFDIEAAQQGIVYIDEIDKITKKDENLDIGRDVSGEGVQQ 1254
            QA YVGED ESILYKL   A  ++E AQ+GIVYIDE+DK+T K  + + GRDVSGEGVQQ
Sbjct: 300  QASYVGEDVESILYKLYVEAGCNVEEAQRGIVYIDEVDKMTMKSHSSNGGRDVSGEGVQQ 359

Query: 1255 SLLKMLEGSIVNVP--DNSSLRNQRGDSIQIDTKDILFICGGAFIDLEKTILERRQDASI 1428
            SLLK+LEG++V+VP  +    R+ RGDSIQ+DTKDILFICGGAFIDLEKT+ ER+ DASI
Sbjct: 360  SLLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASI 419

Query: 1429 GFGAPVRAKMRRGDPTEAAITXXXXXXXXXXXXTAHGLIPEFVGRFPVLVSLAALNEDQL 1608
            GFGA VR  M     + AA+T             A+GLIPEFVGR P+LVSL+ALNEDQL
Sbjct: 420  GFGASVRTNMSTSGLSSAAVTSSLLESLQSEDLVAYGLIPEFVGRLPILVSLSALNEDQL 479

Query: 1609 IQVLTKPKNALCKQYKRMFGMNNVKLQFTXXXXXXXXXXXXSKNTGARGLRAILESVLTE 1788
            +QVLT+PK+AL KQYK++F MNNV+LQFT            SKNTGARGLR+ILES+LTE
Sbjct: 480  VQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATRLIARKAMSKNTGARGLRSILESILTE 539

Query: 1789 AMFEVPDAT---SGNIDLILVDEEAVGQGEKPGCGAKILSGDNKLVQFALQTKKSSDAVS 1959
            AMFEVPD+    S +I  +LVDEEAVG    PGCGAKIL GDN L QF  + +    +  
Sbjct: 540  AMFEVPDSITEGSQSIKAVLVDEEAVGSVGSPGCGAKILKGDNVLQQFVEEAESKEKSKE 599

Query: 1960 DE 1965
            DE
Sbjct: 600  DE 601