BLASTX nr result

ID: Lithospermum22_contig00001175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001175
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-ter...   305   2e-80
ref|XP_002322116.1| predicted protein [Populus trichocarpa] gi|2...   299   1e-78
ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis] g...   298   3e-78
ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycin...   297   6e-78
ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arab...   293   8e-77

>ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72 [Vitis vinifera]
           gi|296083946|emb|CBI24334.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  305 bits (782), Expect = 2e-80
 Identities = 146/193 (75%), Positives = 160/193 (82%)
 Frame = +2

Query: 113 MKLRYAMVCSSNQNRSMESHFLLKKEGFDVASYGTGQHVKLPGPSIREPNVYDFGTPYKH 292
           MK RYAMVCSSNQNRSME+H LLKK+GFDV+SYGTG HVKLPGPS+REPNVY+FGTPYKH
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLREPNVYEFGTPYKH 60

Query: 293 MFXXXXXXXXXXXXXNGILTMLKRNLGVKTAPQRWQDNAGDGTFDVVLTFEEKVFDMVLE 472
           MF             NGIL MLKRN  VKTAPQRWQDNA DG FDVV TFEEKVFDMV+E
Sbjct: 61  MFDDLRRKDPDLYKRNGILPMLKRNSSVKTAPQRWQDNAADGPFDVVFTFEEKVFDMVVE 120

Query: 473 DLHTRDHVLLKPVLIINLEVKDNHEEAAIGGRVALLLCQAIEAADSWEERIDDIICSFEK 652
           DLH RDHVL+K VL+INLEVKDNHEEAAIG R+AL LCQ IEA +SWE+ +DD++  FEK
Sbjct: 121 DLHNRDHVLMKTVLVINLEVKDNHEEAAIGARLALDLCQEIEATESWEDSVDDVVSGFEK 180

Query: 653 HHRRKLTYSISFY 691
            HRRKL YSISFY
Sbjct: 181 QHRRKLLYSISFY 193


>ref|XP_002322116.1| predicted protein [Populus trichocarpa] gi|222869112|gb|EEF06243.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  299 bits (766), Expect = 1e-78
 Identities = 145/193 (75%), Positives = 158/193 (81%)
 Frame = +2

Query: 113 MKLRYAMVCSSNQNRSMESHFLLKKEGFDVASYGTGQHVKLPGPSIREPNVYDFGTPYKH 292
           MK RYAMVCSSNQNRSME+H LLK+ GFDV+SYGTG HVKLPGPS+REPNVYDFGTPYK 
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKRHGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 293 MFXXXXXXXXXXXXXNGILTMLKRNLGVKTAPQRWQDNAGDGTFDVVLTFEEKVFDMVLE 472
           MF             NGIL MLKRN GVK APQRWQDNA DG+F VV TFEEKVFDMVLE
Sbjct: 61  MFDDLRRKDPELYKRNGILPMLKRNSGVKLAPQRWQDNAADGSFSVVFTFEEKVFDMVLE 120

Query: 473 DLHTRDHVLLKPVLIINLEVKDNHEEAAIGGRVALLLCQAIEAADSWEERIDDIICSFEK 652
           DLH RDHVLLK VL+INLEVKDNHEEAA+GG++ L LCQ IEA +SWE+ ID+II +FE 
Sbjct: 121 DLHNRDHVLLKSVLVINLEVKDNHEEAAVGGQLTLELCQKIEAVESWEDSIDEIITAFEA 180

Query: 653 HHRRKLTYSISFY 691
            HRRKL YSISFY
Sbjct: 181 KHRRKLVYSISFY 193


>ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis]
           gi|223545267|gb|EEF46774.1| Protein SSU72, putative
           [Ricinus communis]
          Length = 193

 Score =  298 bits (763), Expect = 3e-78
 Identities = 144/193 (74%), Positives = 160/193 (82%)
 Frame = +2

Query: 113 MKLRYAMVCSSNQNRSMESHFLLKKEGFDVASYGTGQHVKLPGPSIREPNVYDFGTPYKH 292
           MKLRYAMVCSSNQNRSME+H LLK +GFDV+SYGTG HVKLPGPS+REPNVYDFGTPYK 
Sbjct: 1   MKLRYAMVCSSNQNRSMEAHSLLKMQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKQ 60

Query: 293 MFXXXXXXXXXXXXXNGILTMLKRNLGVKTAPQRWQDNAGDGTFDVVLTFEEKVFDMVLE 472
           MF             NGIL MLKRN  VK APQRWQDNA DG+FDVV +FEEKVFDMV+E
Sbjct: 61  MFDDLRRKDPDLYKRNGILPMLKRNSSVKLAPQRWQDNAADGSFDVVFSFEEKVFDMVIE 120

Query: 473 DLHTRDHVLLKPVLIINLEVKDNHEEAAIGGRVALLLCQAIEAADSWEERIDDIICSFEK 652
           DLH RDHVL++ VL+INLEVKDNHEEAAIG R+AL LCQ IEAA+SWE+ ID+II +FE 
Sbjct: 121 DLHNRDHVLMRSVLVINLEVKDNHEEAAIGARLALELCQEIEAAESWEDSIDEIITAFET 180

Query: 653 HHRRKLTYSISFY 691
            HRRKL YS+SFY
Sbjct: 181 KHRRKLLYSVSFY 193


>ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycine max]
           gi|255628381|gb|ACU14535.1| unknown [Glycine max]
          Length = 193

 Score =  297 bits (760), Expect = 6e-78
 Identities = 142/193 (73%), Positives = 158/193 (81%)
 Frame = +2

Query: 113 MKLRYAMVCSSNQNRSMESHFLLKKEGFDVASYGTGQHVKLPGPSIREPNVYDFGTPYKH 292
           MK RYAMVCSSNQNRSME+HFLLK++GFDV+SYGTG HVKLPGPS+REPNVYDFGTPYKH
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHFLLKRQGFDVSSYGTGAHVKLPGPSLREPNVYDFGTPYKH 60

Query: 293 MFXXXXXXXXXXXXXNGILTMLKRNLGVKTAPQRWQDNAGDGTFDVVLTFEEKVFDMVLE 472
           M              NGI  MLKRN  VK APQRWQ+NA DG+FDVV+TFEEKVFDMV+E
Sbjct: 61  MIEDLRRKDPDLYKRNGIFPMLKRNSTVKLAPQRWQENAADGSFDVVVTFEEKVFDMVIE 120

Query: 473 DLHTRDHVLLKPVLIINLEVKDNHEEAAIGGRVALLLCQAIEAADSWEERIDDIICSFEK 652
           DLH RDH LLK VL+INLEVKDNH+EAA+G R+ L LC+ IEAA+SWEE ID+II  FE 
Sbjct: 121 DLHNRDHALLKTVLVINLEVKDNHDEAAVGARLTLDLCREIEAAESWEESIDEIIAGFEN 180

Query: 653 HHRRKLTYSISFY 691
            HRRKL YSISFY
Sbjct: 181 KHRRKLLYSISFY 193


>ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp.
           lyrata] gi|297334789|gb|EFH65207.1| hypothetical protein
           ARALYDRAFT_895246 [Arabidopsis lyrata subsp. lyrata]
          Length = 193

 Score =  293 bits (750), Expect = 8e-77
 Identities = 140/193 (72%), Positives = 157/193 (81%)
 Frame = +2

Query: 113 MKLRYAMVCSSNQNRSMESHFLLKKEGFDVASYGTGQHVKLPGPSIREPNVYDFGTPYKH 292
           M+ RYAMVCSSNQNRSME+H LLK++G DVASYGTG HVKLPGPS+REPNVYDFGTPYK 
Sbjct: 1   MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSVREPNVYDFGTPYKQ 60

Query: 293 MFXXXXXXXXXXXXXNGILTMLKRNLGVKTAPQRWQDNAGDGTFDVVLTFEEKVFDMVLE 472
           MF             NGIL MLKRNL VK APQRWQDNAGDG FDVV+TFEEKVFD VLE
Sbjct: 61  MFDELRRKDPELYKRNGILQMLKRNLSVKLAPQRWQDNAGDGVFDVVMTFEEKVFDSVLE 120

Query: 473 DLHTRDHVLLKPVLIINLEVKDNHEEAAIGGRVALLLCQAIEAADSWEERIDDIICSFEK 652
           DL+ R+  L+K +L++NLEVKDNHEEAAIGGR+AL LCQ IE  ++WE+ IDDI+  FEK
Sbjct: 121 DLNNREQSLMKTILVMNLEVKDNHEEAAIGGRLALELCQEIEGNETWEDTIDDIVAGFEK 180

Query: 653 HHRRKLTYSISFY 691
            HRRKL YSISFY
Sbjct: 181 QHRRKLVYSISFY 193


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