BLASTX nr result

ID: Lithospermum22_contig00001158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001158
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298257.1| predicted protein [Populus trichocarpa] gi|1...   194   1e-47
gb|ABA46763.1| unknown [Solanum tuberosum]                            191   2e-46
gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]    191   2e-46
ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycin...   188   8e-46
ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glyc...   187   1e-45

>ref|XP_002298257.1| predicted protein [Populus trichocarpa] gi|118482187|gb|ABK93022.1|
           unknown [Populus trichocarpa]
           gi|222845515|gb|EEE83062.1| predicted protein [Populus
           trichocarpa]
          Length = 146

 Score =  194 bits (494), Expect = 1e-47
 Identities = 101/143 (70%), Positives = 112/143 (78%)
 Frame = -3

Query: 649 MATVPGQLIWEIVKKNNSFYVKQFGNGTPKTVFSKEPNNLLNLHSYKHSGLANKKTVTIQ 470
           MATVPGQLIWEIVKKNNSF VKQFG GT    FSKE NNL NL+SYKHSGLANKKTVTIQ
Sbjct: 1   MATVPGQLIWEIVKKNNSFLVKQFGRGTASLQFSKENNNLYNLNSYKHSGLANKKTVTIQ 60

Query: 469 PASKEQGVLLATTKTKKQSKPASSLNKSVLKKEFSRMAKAVKNQVADNHYRPDXXXXXXX 290
           PA K+Q V+LATTKTKKQ+KPA+ L+KSV+KKEFSRMAKAV+NQVADN+YRPD       
Sbjct: 61  PADKDQAVVLATTKTKKQNKPAALLHKSVMKKEFSRMAKAVENQVADNNYRPDLKRAALA 120

Query: 289 XXXXXXXXXXXXXSGIKKKNRQA 221
                        SG+KK+NRQA
Sbjct: 121 RLSVVHRSLKVSKSGVKKRNRQA 143


>gb|ABA46763.1| unknown [Solanum tuberosum]
          Length = 143

 Score =  191 bits (484), Expect = 2e-46
 Identities = 97/143 (67%), Positives = 108/143 (75%)
 Frame = -3

Query: 649 MATVPGQLIWEIVKKNNSFYVKQFGNGTPKTVFSKEPNNLLNLHSYKHSGLANKKTVTIQ 470
           M TVPGQL+WEIVKKNNSF VK+FGNG+   VFSKEPNNL NLHSYKHSGLANKKTVTIQ
Sbjct: 1   MTTVPGQLVWEIVKKNNSFLVKEFGNGSAGVVFSKEPNNLCNLHSYKHSGLANKKTVTIQ 60

Query: 469 PASKEQGVLLATTKTKKQSKPASSLNKSVLKKEFSRMAKAVKNQVADNHYRPDXXXXXXX 290
           P  K++ VLLAT+KTKKQ+ P+S LNKSV+KKEF RMAKAV NQV DN+YRPD       
Sbjct: 61  PEGKDKSVLLATSKTKKQNMPSSLLNKSVMKKEFRRMAKAVTNQVGDNYYRPDLKKAALA 120

Query: 289 XXXXXXXXXXXXXSGIKKKNRQA 221
                        SG KK+NRQA
Sbjct: 121 RLSVVNRSLKVTKSGAKKRNRQA 143


>gb|ABD65459.1| putative ribosomal protein L28 [Gossypium hirsutum]
          Length = 150

 Score =  191 bits (484), Expect = 2e-46
 Identities = 97/143 (67%), Positives = 110/143 (76%)
 Frame = -3

Query: 649 MATVPGQLIWEIVKKNNSFYVKQFGNGTPKTVFSKEPNNLLNLHSYKHSGLANKKTVTIQ 470
           MATVPGQLIWE+VK+NN F VKQFG GT    FSKEPNNL N++SYKHSGLANKKTVTIQ
Sbjct: 1   MATVPGQLIWEVVKRNNCFLVKQFGRGTAGVRFSKEPNNLYNVNSYKHSGLANKKTVTIQ 60

Query: 469 PASKEQGVLLATTKTKKQSKPASSLNKSVLKKEFSRMAKAVKNQVADNHYRPDXXXXXXX 290
           PA K+Q VLLATTK+KKQ+KP+S L+KSV+KKEF RMAKAVKNQV DN+YRPD       
Sbjct: 61  PAGKDQSVLLATTKSKKQNKPSSLLHKSVMKKEFPRMAKAVKNQVTDNYYRPDLTKAALA 120

Query: 289 XXXXXXXXXXXXXSGIKKKNRQA 221
                        SG+KK+NRQA
Sbjct: 121 RLSAVNRSLKVAKSGVKKRNRQA 143


>ref|NP_001238207.1| uncharacterized protein LOC100500189 [Glycine max]
           gi|255629617|gb|ACU15156.1| unknown [Glycine max]
          Length = 150

 Score =  188 bits (478), Expect = 8e-46
 Identities = 94/143 (65%), Positives = 111/143 (77%)
 Frame = -3

Query: 649 MATVPGQLIWEIVKKNNSFYVKQFGNGTPKTVFSKEPNNLLNLHSYKHSGLANKKTVTIQ 470
           MATVPGQLIWE+VKKNNSF VK+FG GT    FS+EPNNL NL+++K+SGLANKKTVT+Q
Sbjct: 1   MATVPGQLIWEVVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANKKTVTVQ 60

Query: 469 PASKEQGVLLATTKTKKQSKPASSLNKSVLKKEFSRMAKAVKNQVADNHYRPDXXXXXXX 290
           P  K+Q VLLATTKTKKQ+KPA+ L+KSV+KKEF RMAKAV+NQVADN+YRPD       
Sbjct: 61  PTGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKKAALA 120

Query: 289 XXXXXXXXXXXXXSGIKKKNRQA 221
                        SG+KK+NRQA
Sbjct: 121 RLSAVNRSLRVAKSGVKKRNRQA 143


>ref|XP_003543611.1| PREDICTED: 60S ribosomal protein L28-2 [Glycine max]
          Length = 150

 Score =  187 bits (476), Expect = 1e-45
 Identities = 94/143 (65%), Positives = 112/143 (78%)
 Frame = -3

Query: 649 MATVPGQLIWEIVKKNNSFYVKQFGNGTPKTVFSKEPNNLLNLHSYKHSGLANKKTVTIQ 470
           M+TVPGQLIWEIVKKNNSF VK+FG GT    FS+EPNNL NL+++K+SGLAN+KTVT+Q
Sbjct: 1   MSTVPGQLIWEIVKKNNSFLVKEFGRGTQSVQFSREPNNLYNLNTFKYSGLANQKTVTVQ 60

Query: 469 PASKEQGVLLATTKTKKQSKPASSLNKSVLKKEFSRMAKAVKNQVADNHYRPDXXXXXXX 290
           PA K+Q VLLATTKTKKQ+KPA+ L+KSV+KKEF RMAKAV+NQVADN+YRPD       
Sbjct: 61  PAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRRMAKAVQNQVADNYYRPDLKRAALA 120

Query: 289 XXXXXXXXXXXXXSGIKKKNRQA 221
                        SG+KK+NRQA
Sbjct: 121 RLSAVNRSLRVAKSGVKKRNRQA 143


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