BLASTX nr result

ID: Lithospermum22_contig00001157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001157
         (941 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40678.1| unknown [Lotus japonicus]                              140   6e-31
ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protei...   139   1e-30
ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycin...   139   1e-30
ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|2...   137   5e-30
ref|XP_002888931.1| RNA recognition motif-containing protein [Ar...   120   5e-25

>gb|AFK40678.1| unknown [Lotus japonicus]
          Length = 187

 Score =  140 bits (352), Expect = 6e-31
 Identities = 76/120 (63%), Positives = 89/120 (74%), Gaps = 1/120 (0%)
 Frame = -2

Query: 643 AKMSLNTP-TKLFVSGLSFRTTEESLRNAFKNFGQLVEVNLVMDKIANRPKGFAFVRFAT 467
           AK S + P T+L+VSGLSFRTTEESLRN FKNFGQLV+VNLVMDK+ANRP+GFAF+R+AT
Sbjct: 85  AKPSSSAPSTRLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYAT 144

Query: 466 EEESKKAIEGMHGKXXXXXXXXXXXXXXXXXXXXXXXXXXFLDGRVIFVEVAKPKSDIRR 287
           EEES+KAIEGMHGK                          FLDGRVIFVEVAKP+S++R+
Sbjct: 145 EEESQKAIEGMHGK--------------------------FLDGRVIFVEVAKPRSELRQ 178


>ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|296088019|emb|CBI35302.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  139 bits (350), Expect = 1e-30
 Identities = 73/115 (63%), Positives = 86/115 (74%)
 Frame = -2

Query: 619 TKLFVSGLSFRTTEESLRNAFKNFGQLVEVNLVMDKIANRPKGFAFVRFATEEESKKAIE 440
           T+L+VSGLSFRTTEESLRNAF+ FGQLVEVNLVMDKIANRP+GFAF+R++TEEES+KAIE
Sbjct: 79  TRLYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKAIE 138

Query: 439 GMHGKXXXXXXXXXXXXXXXXXXXXXXXXXXFLDGRVIFVEVAKPKSDIRRENNK 275
           GMHGK                          FLDGRVIFVEVAKP+S++R+  N+
Sbjct: 139 GMHGK--------------------------FLDGRVIFVEVAKPRSELRQNQNQ 167


>ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
           gi|255625921|gb|ACU13305.1| unknown [Glycine max]
          Length = 180

 Score =  139 bits (349), Expect = 1e-30
 Identities = 77/118 (65%), Positives = 87/118 (73%), Gaps = 1/118 (0%)
 Frame = -2

Query: 643 AKMSLNTP-TKLFVSGLSFRTTEESLRNAFKNFGQLVEVNLVMDKIANRPKGFAFVRFAT 467
           AK S  +P TKL+VSGLSFRTTEESLRNAFKNFGQLVEV LVMD+IANRP+GFAF+R+AT
Sbjct: 79  AKPSFPSPQTKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRPRGFAFLRYAT 138

Query: 466 EEESKKAIEGMHGKXXXXXXXXXXXXXXXXXXXXXXXXXXFLDGRVIFVEVAKPKSDI 293
           EEES+KAIEGMHGK                          FLDGRVIFVEVAKP+S++
Sbjct: 139 EEESQKAIEGMHGK--------------------------FLDGRVIFVEVAKPRSEL 170


>ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|222859004|gb|EEE96551.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  137 bits (344), Expect = 5e-30
 Identities = 71/114 (62%), Positives = 85/114 (74%)
 Frame = -2

Query: 619 TKLFVSGLSFRTTEESLRNAFKNFGQLVEVNLVMDKIANRPKGFAFVRFATEEESKKAIE 440
           TKL+VSGLSFRTTEESLRNAF+NFGQLV+VNLVMDK+A RP+GFAF+R+ TEEE++KAIE
Sbjct: 90  TKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKAIE 149

Query: 439 GMHGKXXXXXXXXXXXXXXXXXXXXXXXXXXFLDGRVIFVEVAKPKSDIRRENN 278
           GMHGK                          FLDGRVIFVEVAKP+S++R+ +N
Sbjct: 150 GMHGK--------------------------FLDGRVIFVEVAKPRSELRQSHN 177


>ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334772|gb|EFH65190.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 181

 Score =  120 bits (301), Expect = 5e-25
 Identities = 63/113 (55%), Positives = 78/113 (69%)
 Frame = -2

Query: 625 TPTKLFVSGLSFRTTEESLRNAFKNFGQLVEVNLVMDKIANRPKGFAFVRFATEEESKKA 446
           T TKL+VSGLSFRTTE++LR+ F+ FG+L+ +NLVMDK+ANRP+GFAF+R+ TEEE+ KA
Sbjct: 75  TKTKLYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKA 134

Query: 445 IEGMHGKXXXXXXXXXXXXXXXXXXXXXXXXXXFLDGRVIFVEVAKPKSDIRR 287
           I+GMHGK                          FLDGRVIFVE AK +SDI R
Sbjct: 135 IQGMHGK--------------------------FLDGRVIFVEEAKTRSDISR 161


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