BLASTX nr result

ID: Lithospermum22_contig00001001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00001001
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]                 385   e-105
ref|XP_002889528.1| hypothetical protein ARALYDRAFT_887669 [Arab...   377   e-102
gb|AEL98754.1| translocon-associated protein, partial [Silene la...   374   e-101
ref|NP_171986.3| translocon at the inner envelope membrane of ch...   373   e-101
ref|XP_002510436.1| conserved hypothetical protein [Ricinus comm...   371   e-100

>gb|ABB86268.1| Tic20-like protein [Solanum tuberosum]
          Length = 271

 Score =  385 bits (990), Expect = e-105
 Identities = 191/274 (69%), Positives = 207/274 (75%), Gaps = 5/274 (1%)
 Frame = +3

Query: 141 MVYSGCILGYGGI-----TCGSKSYNVVSSRVRGLPGKASLSCLNVIGEPYSNQTYSAKV 305
           M+ +GC L  GGI      C SKSY   SS       K  ++C+     P+   T  +K 
Sbjct: 1   MILNGCYLSTGGICKPYKACNSKSYLSASSCTPLPLSKVIVTCVKRSPAPHQYPTSCSK- 59

Query: 306 TGIWHPCLSFGSSHHFRGEKGSLYQTIPTFPQSRGSNNFAPKASKDVPYSYRFPAMTKKP 485
            G     LS  SS    GE G L   IP  P+ R   +F+P+ASKDVPYSYRFP MTKKP
Sbjct: 60  -GFSFLDLSSASSLLLSGEYGGLSNAIPQLPR-RSQLSFSPRASKDVPYSYRFPPMTKKP 117

Query: 486 QWWWRMFACLPYLMPLHETWMYAETAYHLHPFLEDFEFFTYPFLEAISRLPGWFLMAYFF 665
           +WWWR  ACLPYLMPLHETWMYAETAYHLHPFLED EF TYPFL AI RLP WFLMAYFF
Sbjct: 118 RWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDLEFLTYPFLGAIGRLPSWFLMAYFF 177

Query: 666 VAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVAFG 845
           VAYLGIVRRKEWPHF+RFHVV+GMLLEIALQVIGT+SRWMPLAVYWGK GMHFWTAVAF 
Sbjct: 178 VAYLGIVRRKEWPHFYRFHVVIGMLLEIALQVIGTISRWMPLAVYWGKVGMHFWTAVAFA 237

Query: 846 YLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 947
           YLFTVLESIRCALAGMYAD+PFVCDAAYIQIPYD
Sbjct: 238 YLFTVLESIRCALAGMYADVPFVCDAAYIQIPYD 271


>ref|XP_002889528.1| hypothetical protein ARALYDRAFT_887669 [Arabidopsis lyrata subsp.
           lyrata] gi|297335370|gb|EFH65787.1| hypothetical protein
           ARALYDRAFT_887669 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  377 bits (969), Expect = e-102
 Identities = 186/254 (73%), Positives = 196/254 (77%), Gaps = 1/254 (0%)
 Frame = +3

Query: 189 SKSYNVVSSRVRGLPGKASLSCL-NVIGEPYSNQTYSAKVTGIWHPCLSFGSSHHFRGEK 365
           S SY   S R +    ++SLS + N  G P           G+    LS  SS    GE+
Sbjct: 21  SSSYRAASGRTQHYLARSSLSVIKNSWGSPSPFNELPRVSRGVPLSYLSASSSLLLNGEQ 80

Query: 366 GSLYQTIPTFPQSRGSNNFAPKASKDVPYSYRFPAMTKKPQWWWRMFACLPYLMPLHETW 545
           GSL  T+P  P  R      P+ASKDVP S+RFP MTKKPQWWWR  ACLPYLMPLHETW
Sbjct: 81  GSLSGTLPVLPIRR-KTLLTPRASKDVPSSFRFPPMTKKPQWWWRTLACLPYLMPLHETW 139

Query: 546 MYAETAYHLHPFLEDFEFFTYPFLEAISRLPGWFLMAYFFVAYLGIVRRKEWPHFFRFHV 725
           MYAETAYHLHPFLEDFEF TYPFL AI RLP WFLMAYFFVAYLGIVRRKEWPHFFRFHV
Sbjct: 140 MYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGIVRRKEWPHFFRFHV 199

Query: 726 VMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVAFGYLFTVLESIRCALAGMYADI 905
           VMGMLLEIALQVIGTVS+WMPL VYWGKFGMHFWTAVAF YLFTVLESIRCALAGMYADI
Sbjct: 200 VMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAYLFTVLESIRCALAGMYADI 259

Query: 906 PFVCDAAYIQIPYD 947
           PFVCDAAYIQIPYD
Sbjct: 260 PFVCDAAYIQIPYD 273


>gb|AEL98754.1| translocon-associated protein, partial [Silene latifolia]
          Length = 266

 Score =  374 bits (959), Expect = e-101
 Identities = 182/264 (68%), Positives = 200/264 (75%), Gaps = 9/264 (3%)
 Frame = +3

Query: 183 CGSKSYNVVSSRVRGLPGKASLSCLNVI---------GEPYSNQTYSAKVTGIWHPCLSF 335
           C   S N    R   LP K+SL  +  +           P     + A+V+      LS 
Sbjct: 6   CKPLSCNASWPRPTPLPAKSSLPTVKALYGLSEGMKSHSPAGLTRHLARVSSSL--LLSA 63

Query: 336 GSSHHFRGEKGSLYQTIPTFPQSRGSNNFAPKASKDVPYSYRFPAMTKKPQWWWRMFACL 515
            S+    GE G L  TIP  P+ RGS+  AP+ASKDVPYSYRFP MTKKP+WWWR  ACL
Sbjct: 64  SSTSLLSGEHGGLLSTIPHIPKRRGSD-MAPRASKDVPYSYRFPPMTKKPRWWWRTLACL 122

Query: 516 PYLMPLHETWMYAETAYHLHPFLEDFEFFTYPFLEAISRLPGWFLMAYFFVAYLGIVRRK 695
           PYLMPLHETWMYA TAYHLHPFLED EF TYPF ++I  LPGWF MAYFF+AYLGIVRRK
Sbjct: 123 PYLMPLHETWMYAGTAYHLHPFLEDLEFLTYPFFQSIGSLPGWFFMAYFFMAYLGIVRRK 182

Query: 696 EWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVAFGYLFTVLESIR 875
           EWPHFFRFHVVMGMLLEIALQVIGT+SRWMPLAVYWGKFGMHFWTAVAFGYLFTVLE++R
Sbjct: 183 EWPHFFRFHVVMGMLLEIALQVIGTISRWMPLAVYWGKFGMHFWTAVAFGYLFTVLEAMR 242

Query: 876 CALAGMYADIPFVCDAAYIQIPYD 947
           CALAGMYAD+PFVCDAAYIQIPYD
Sbjct: 243 CALAGMYADVPFVCDAAYIQIPYD 266


>ref|NP_171986.3| translocon at the inner envelope membrane of chloroplasts 20
           [Arabidopsis thaliana]
           gi|75151589|sp|Q8GZ79.1|TI201_ARATH RecName:
           Full=Protein TIC 20-I, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 20-I; Short=AtTIC20-I; Flags: Precursor
           gi|26449432|dbj|BAC41843.1| unknown protein [Arabidopsis
           thaliana] gi|332189644|gb|AEE27765.1| translocon at the
           inner envelope membrane of chloroplasts 20 [Arabidopsis
           thaliana]
          Length = 274

 Score =  373 bits (958), Expect = e-101
 Identities = 185/255 (72%), Positives = 199/255 (78%), Gaps = 2/255 (0%)
 Frame = +3

Query: 189 SKSYNVVSSRVRGLPGKASLSCL-NVIGEPYSNQTYSAKVT-GIWHPCLSFGSSHHFRGE 362
           S SY   + + +    ++SL  + N  G P S      +V+ G+    LS  SS    GE
Sbjct: 21  SSSYRAAAGQTQHYLARSSLPVVKNSWGSPPSPFNELPRVSRGVPLSYLSASSSLLLNGE 80

Query: 363 KGSLYQTIPTFPQSRGSNNFAPKASKDVPYSYRFPAMTKKPQWWWRMFACLPYLMPLHET 542
           +GSL  T+P  P  R      P+ASKDVP S+RFP MTKKPQWWWR  ACLPYLMPLHET
Sbjct: 81  QGSLSGTLPVLPVRR-KTLLTPRASKDVPSSFRFPPMTKKPQWWWRTLACLPYLMPLHET 139

Query: 543 WMYAETAYHLHPFLEDFEFFTYPFLEAISRLPGWFLMAYFFVAYLGIVRRKEWPHFFRFH 722
           WMYAETAYHLHPFLEDFEF TYPFL AI RLP WFLMAYFFVAYLGIVRRKEWPHFFRFH
Sbjct: 140 WMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGIVRRKEWPHFFRFH 199

Query: 723 VVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVAFGYLFTVLESIRCALAGMYAD 902
           VVMGMLLEIALQVIGTVS+WMPL VYWGKFGMHFWTAVAF YLFTVLESIRCALAGMYAD
Sbjct: 200 VVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAYLFTVLESIRCALAGMYAD 259

Query: 903 IPFVCDAAYIQIPYD 947
           IPFVCDAAYIQIPYD
Sbjct: 260 IPFVCDAAYIQIPYD 274


>ref|XP_002510436.1| conserved hypothetical protein [Ricinus communis]
           gi|223551137|gb|EEF52623.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  371 bits (953), Expect = e-100
 Identities = 184/277 (66%), Positives = 209/277 (75%), Gaps = 8/277 (2%)
 Frame = +3

Query: 141 MVYSGCIL----GYGGI---TCGSKSYNVVSSRVRGLPGKASLSCLNVIGEPYSNQTYSA 299
           M+ +GCI+    GY  I   TC     ++VS+ V  L  KA+   +     P  N     
Sbjct: 1   MILNGCIVPSTSGYALINTRTCKPWPNSLVSACVPRLTTKAAFLDIRNSCTPVPNLESKF 60

Query: 300 KVT-GIWHPCLSFGSSHHFRGEKGSLYQTIPTFPQSRGSNNFAPKASKDVPYSYRFPAMT 476
            ++ G+    LS  S+    G++G ++  IP+FP+ R      P+ASKDVPYS+R+P MT
Sbjct: 61  WLSRGLPFLSLSAASTPLLSGDQGGIWHAIPSFPRQRRCY-LCPRASKDVPYSFRYPPMT 119

Query: 477 KKPQWWWRMFACLPYLMPLHETWMYAETAYHLHPFLEDFEFFTYPFLEAISRLPGWFLMA 656
           KKP+WWWR  ACLPYLMPLHETWMYAETAYHLHPFLEDFEF TYPFL AI RLP WFLMA
Sbjct: 120 KKPKWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMA 179

Query: 657 YFFVAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAV 836
           YFFVAYLG+VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK GMHFWTA+
Sbjct: 180 YFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAI 239

Query: 837 AFGYLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 947
           AF YLFTVLE IRCALAGMYAD+PF CDAAYIQIPYD
Sbjct: 240 AFAYLFTVLECIRCALAGMYADVPFACDAAYIQIPYD 276


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