BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000999
         (1438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   138   3e-62
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   128   6e-59
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   127   2e-58
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   127   2e-58
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   127   2e-58

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  138 bits (348), Expect(3) = 3e-62
 Identities = 68/138 (49%), Positives = 91/138 (65%)
 Frame = +3

Query: 3    QKVSVQKSSIVFSPNVQQTNRDAITNILGMSEVATHEKYLGLPTIIGGSKKAIFTSLVER 182
            Q+V++ K+ +VFS +V +  R AI N+LG+ EV   EKYLGLPTIIG SKK  F  + ER
Sbjct: 715  QQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEVDRQEKYLGLPTIIGRSKKVTFACIKER 774

Query: 183  EKHRIVD*KPRLLSKAGKEVFITAILQAIPTYAMQCFLVPIHICKEIHSVIASYWWGSDT 362
               ++   K +LLS+ GKEV I ++ QAIPTY M  F +P  +  EIHS++A +WWGS  
Sbjct: 775  IWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYMMSVFSLPSGLIDEIHSLLARFWWGSSD 834

Query: 363  ENR*IHWASWRTLSLSKN 416
             NR +HW SW TL   K+
Sbjct: 835  TNRKMHWHSWDTLCYPKS 852



 Score = 90.1 bits (222), Expect(3) = 3e-62
 Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 8/205 (3%)
 Frame = +1

Query: 610  SRMPITPDLDDFPSATVSDLIDEDIGTWNILKVRSWFFNVDSEEILKMPLNNLNQADSII 789
            + M  TP  D      V DLID   G WNI  V+  F   + E +L +PL+     D   
Sbjct: 948  AHMVPTPQADSNLDLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSRFLPDDHRY 1007

Query: 790  WGPHPKGIFTVKTTYEFIHTLSQEASLGPT-TSNPQH-----TFYKRFWKIKISGKIKHF 951
            W P   GIF+V++ Y           LGP  T   QH       ++R W+++   K+ HF
Sbjct: 1008 WWPSRNGIFSVRSCYWL-------GRLGPVRTWQLQHGERETELWRRVWQLQGPPKLSHF 1060

Query: 952  LWKALNNNLPTTNKLRQRKVDIQPTCILYGTHEETVMHVLHPCSFTQEVNRI--LKITYM 1125
            LW+A   +L    +L  R + +  TC + G  +E++ H L  C+F + + ++       M
Sbjct: 1061 LWRACKGSLAVKGRLFSRHISVDATCSVCGDPDESINHALFDCTFARAIWQVSGFASLMM 1120

Query: 1126 NGREMEFQDLFELKWDRLPPDRFRT 1200
            N     F +  E        + FRT
Sbjct: 1121 NAPLSSFSERLEWLAKHATKEEFRT 1145



 Score = 59.3 bits (142), Expect(3) = 3e-62
 Identities = 28/61 (45%), Positives = 39/61 (63%)
 Frame = +2

Query: 419  GGLGFSDMHHFNQALLCKQV*RLLIEPMSPLAKVYKAKYFSNGDYSTSTLGPKPSFTWRS 598
            GGLGF D+H FNQ+LL KQ  RL     + L ++ +A+YF + +   +  G  PSFTWRS
Sbjct: 854  GGLGFRDLHCFNQSLLAKQAWRLCTGDQTLLYRLLQARYFKSSELLEARRGYNPSFTWRS 913

Query: 599  L 601
            +
Sbjct: 914  I 914


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  128 bits (322), Expect(3) = 6e-59
 Identities = 61/138 (44%), Positives = 86/138 (62%)
 Frame = +3

Query: 3    QKVSVQKSSIVFSPNVQQTNRDAITNILGMSEVATHEKYLGLPTIIGGSKKAIFTSLVER 182
            Q ++  KS+++FSPN     + A+   L M    T+EKYLGLP  +G S+  IF+ L ER
Sbjct: 941  QVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKER 1000

Query: 183  EKHRIVD*KPRLLSKAGKEVFITAILQAIPTYAMQCFLVPIHICKEIHSVIASYWWGSDT 362
               RI   K +LLS+AGKE+ I A+ QAIPT+AM CF +   +C +I  +IA YWW +  
Sbjct: 1001 IWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQE 1060

Query: 363  ENR*IHWASWRTLSLSKN 416
            ++  +HW SW  L+L KN
Sbjct: 1061 KDNKMHWLSWNKLTLPKN 1078



 Score = 92.8 bits (229), Expect(3) = 6e-59
 Identities = 55/178 (30%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
 Frame = +1

Query: 598  PPLWSRMPITPDLDDFPSATVSDLIDEDIGTWNILKVRSWFFNVDSEEILKMPLNNLNQA 777
            P  WSR P+TP   +  +  V +LID   GTW+   +   F+  D   I  +P++ +   
Sbjct: 1170 PRGWSRKPMTPRGANLVTK-VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEME 1227

Query: 778  DSIIWGPHPKGIFTVKTTYEFIHTLSQEASLG--PTTSNPQH---TFYKRFWKIKISGKI 942
            D + W    +G FTVK+ Y+    + + AS    P  SN +     F+K+ WK+ + GKI
Sbjct: 1228 DVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKI 1287

Query: 943  KHFLWKALNNNLPTTNKLRQRKVDIQPTCILYGTHEETVMHVLHPCSFTQEVNRILKI 1116
            KHFLW+  +N L     L+ R +D+   C++ G + E   H+   C   ++V + L +
Sbjct: 1288 KHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 1345



 Score = 55.5 bits (132), Expect(3) = 6e-59
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = +2

Query: 419  GGLGFSDMHHFNQALLCKQV*RLLIEPMSPLAKVYKAKYFSNGDYSTSTLGPKPSFTWRS 598
            GGLGF D++ FN A+L KQ  RL+ +P S  ++V +AKYF  GD          S+TWRS
Sbjct: 1080 GGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRS 1139

Query: 599  LLSG 610
            +  G
Sbjct: 1140 IQKG 1143


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  127 bits (318), Expect(3) = 2e-58
 Identities = 60/138 (43%), Positives = 86/138 (62%)
 Frame = +3

Query: 3    QKVSVQKSSIVFSPNVQQTNRDAITNILGMSEVATHEKYLGLPTIIGGSKKAIFTSLVER 182
            Q ++  KS+++FSPN     + A+   L M    T+E+YLGLP  +G S+  IF+ L ER
Sbjct: 968  QVINKDKSAVMFSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKER 1027

Query: 183  EKHRIVD*KPRLLSKAGKEVFITAILQAIPTYAMQCFLVPIHICKEIHSVIASYWWGSDT 362
               RI   K +LLS+AGKE+ I A+ QAIPT+AM CF +   +C +I  +IA YWW +  
Sbjct: 1028 IWQRIQGWKEKLLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQE 1087

Query: 363  ENR*IHWASWRTLSLSKN 416
            ++  +HW SW  L+L KN
Sbjct: 1088 KDNKMHWLSWNKLTLPKN 1105



 Score = 92.4 bits (228), Expect(3) = 2e-58
 Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
 Frame = +1

Query: 598  PPLWSRMPITPDLDDFPSATVSDLIDEDIGTWNILKVRSWFFNVDSEEILKMPLNNLNQA 777
            P  WSR P+TP   +  +  V +LID   GTW+   +   F+  D   I  +P++ +   
Sbjct: 1197 PRGWSRKPMTPRGANLVTK-VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEME 1254

Query: 778  DSIIWGPHPKGIFTVKTTYEFIHTLSQEASLG--PTTSNPQH---TFYKRFWKIKISGKI 942
            D + W    +G FTVK+ Y+    + + AS    P  SN +     F+K+ WK+ + GKI
Sbjct: 1255 DVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKI 1314

Query: 943  KHFLWKALNNNLPTTNKLRQRKVDIQPTCILYGTHEETVMHVLHPCSFTQEVNRILKI 1116
            KHFLW+  +N L     L  R +D+   C++ G + E   H+   C   ++V + L +
Sbjct: 1315 KHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 1372



 Score = 55.5 bits (132), Expect(3) = 2e-58
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = +2

Query: 419  GGLGFSDMHHFNQALLCKQV*RLLIEPMSPLAKVYKAKYFSNGDYSTSTLGPKPSFTWRS 598
            GGLGF D++ FN A+L KQ  RL+ +P S  ++V +AKYF  GD          S+TWRS
Sbjct: 1107 GGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRS 1166

Query: 599  LLSG 610
            +  G
Sbjct: 1167 IQKG 1170


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  127 bits (318), Expect(3) = 2e-58
 Identities = 60/138 (43%), Positives = 85/138 (61%)
 Frame = +3

Query: 3    QKVSVQKSSIVFSPNVQQTNRDAITNILGMSEVATHEKYLGLPTIIGGSKKAIFTSLVER 182
            Q ++  KS+++FSPN     + A+   L M    T+EKYLGLP  +G S+  IF+ L ER
Sbjct: 913  QVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKER 972

Query: 183  EKHRIVD*KPRLLSKAGKEVFITAILQAIPTYAMQCFLVPIHICKEIHSVIASYWWGSDT 362
               RI   K +LLS+AGKE+ I A+ Q IPT+AM CF +   +C +I  +IA YWW +  
Sbjct: 973  IWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQE 1032

Query: 363  ENR*IHWASWRTLSLSKN 416
            ++  +HW SW  L+L KN
Sbjct: 1033 KDNKMHWLSWNKLTLPKN 1050



 Score = 92.4 bits (228), Expect(3) = 2e-58
 Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
 Frame = +1

Query: 598  PPLWSRMPITPDLDDFPSATVSDLIDEDIGTWNILKVRSWFFNVDSEEILKMPLNNLNQA 777
            P  WSR P+TP   +  +  V +LID   GTW+   +   F+  D   I  +P++ +   
Sbjct: 1142 PRGWSRKPMTPRGANLVTK-VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEME 1199

Query: 778  DSIIWGPHPKGIFTVKTTYEFIHTLSQEASLG--PTTSNPQH---TFYKRFWKIKISGKI 942
            D + W    +G FTVK+ Y+    + + AS    P  SN +     F+K+ WK+ + GKI
Sbjct: 1200 DVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKI 1259

Query: 943  KHFLWKALNNNLPTTNKLRQRKVDIQPTCILYGTHEETVMHVLHPCSFTQEVNRILKI 1116
            KHFLW+  +N L     L  R +D+   C++ G + E   H+   C   ++V + L +
Sbjct: 1260 KHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 1317



 Score = 55.5 bits (132), Expect(3) = 2e-58
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = +2

Query: 419  GGLGFSDMHHFNQALLCKQV*RLLIEPMSPLAKVYKAKYFSNGDYSTSTLGPKPSFTWRS 598
            GGLGF D++ FN A+L KQ  RL+ +P S  ++V +AKYF  GD          S+TWRS
Sbjct: 1052 GGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRS 1111

Query: 599  LLSG 610
            +  G
Sbjct: 1112 IQKG 1115


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  127 bits (318), Expect(3) = 2e-58
 Identities = 60/138 (43%), Positives = 85/138 (61%)
 Frame = +3

Query: 3    QKVSVQKSSIVFSPNVQQTNRDAITNILGMSEVATHEKYLGLPTIIGGSKKAIFTSLVER 182
            Q ++  KS+++FSPN     + A+   L M    T+EKYLGLP  +G S+  IF+ L ER
Sbjct: 909  QVINKDKSAVMFSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKER 968

Query: 183  EKHRIVD*KPRLLSKAGKEVFITAILQAIPTYAMQCFLVPIHICKEIHSVIASYWWGSDT 362
               RI   K +LLS+AGKE+ I A+ Q IPT+AM CF +   +C +I  +IA YWW +  
Sbjct: 969  IWQRIQGWKEKLLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQE 1028

Query: 363  ENR*IHWASWRTLSLSKN 416
            ++  +HW SW  L+L KN
Sbjct: 1029 KDNKMHWLSWNKLTLPKN 1046



 Score = 92.4 bits (228), Expect(3) = 2e-58
 Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
 Frame = +1

Query: 598  PPLWSRMPITPDLDDFPSATVSDLIDEDIGTWNILKVRSWFFNVDSEEILKMPLNNLNQA 777
            P  WSR P+TP   +  +  V +LID   GTW+   +   F+  D   I  +P++ +   
Sbjct: 1138 PRGWSRKPMTPRGANLVTK-VEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVH-VEME 1195

Query: 778  DSIIWGPHPKGIFTVKTTYEFIHTLSQEASLG--PTTSNPQH---TFYKRFWKIKISGKI 942
            D + W    +G FTVK+ Y+    + + AS    P  SN +     F+K+ WK+ + GKI
Sbjct: 1196 DVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKI 1255

Query: 943  KHFLWKALNNNLPTTNKLRQRKVDIQPTCILYGTHEETVMHVLHPCSFTQEVNRILKI 1116
            KHFLW+  +N L     L  R +D+   C++ G + E   H+   C   ++V + L +
Sbjct: 1256 KHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 1313



 Score = 55.5 bits (132), Expect(3) = 2e-58
 Identities = 29/64 (45%), Positives = 39/64 (60%)
 Frame = +2

Query: 419  GGLGFSDMHHFNQALLCKQV*RLLIEPMSPLAKVYKAKYFSNGDYSTSTLGPKPSFTWRS 598
            GGLGF D++ FN A+L KQ  RL+ +P S  ++V +AKYF  GD          S+TWRS
Sbjct: 1048 GGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSNVSYTWRS 1107

Query: 599  LLSG 610
            +  G
Sbjct: 1108 IQKG 1111