BLASTX nr result

ID: Lithospermum22_contig00000984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000984
         (1498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]      322   2e-85
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote...   308   2e-81
ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2...   306   7e-81
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   306   9e-81
ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding prote...   303   6e-80

>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
          Length = 456

 Score =  322 bits (825), Expect = 2e-85
 Identities = 167/222 (75%), Positives = 178/222 (80%), Gaps = 5/222 (2%)
 Frame = +2

Query: 848  NGENKTIWVGDLHHWMEEEYLRNCFASTREVASIKVIRNKQTGFSEGYGFVEFNTHAAAE 1027
            N EN+TIWVGDL +WM+E+YLRNCFAST EVASIKVIRNKQTGFSEGYGFVEF THAAAE
Sbjct: 113  NNENRTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAE 172

Query: 1028 KVLQMYPHSVMPNTDQPFRINWATFSMGDKRXXXXXXXXXXXGSDLSIFVGDLATDVTDA 1207
            KVLQ Y    MPN DQPFR+NWATFSMGDKR           GSDLSIFVGDLA DVTD 
Sbjct: 173  KVLQTYSCMTMPNVDQPFRLNWATFSMGDKR--------ANNGSDLSIFVGDLAADVTDT 224

Query: 1208 LLHETFVTRYPSVKGAKVVIDANTNRSKGYGFVRFGDDNERTQALNEMNGVYCSSRPMRI 1387
            LLHETF T+YPSVK AKVV DANT RSKGYGFVRFGDDNER+QA+ EMNGVYCSSRPMRI
Sbjct: 225  LLHETFATKYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRI 284

Query: 1388 GPATPRK-SGYQQYCPSPGPGGYSN----RTSEQEGDSMNTT 1498
            G ATPRK SGYQQ   S   GGYSN    + S+ + DS NTT
Sbjct: 285  GAATPRKSSGYQQQYSS--QGGYSNGGPAQGSQPDADSTNTT 324


>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
            2 [Vitis vinifera]
          Length = 418

 Score =  308 bits (790), Expect = 2e-81
 Identities = 154/218 (70%), Positives = 176/218 (80%), Gaps = 1/218 (0%)
 Frame = +2

Query: 848  NGENKTIWVGDLHHWMEEEYLRNCFASTREVASIKVIRNKQTGFSEGYGFVEFNTHAAAE 1027
            N +N+TIWVGDLH+WM+E YL +CFA+T E+AS+KVIRNKQTG SEGYGFVEF +HAAAE
Sbjct: 80   NADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAE 139

Query: 1028 KVLQMYPHSVMPNTDQPFRINWATFSMGDKRXXXXXXXXXXXGSDLSIFVGDLATDVTDA 1207
            KVLQ Y   +MPNTDQPFR+NWATFSMGDKR           G DLSIFVGDLA+DV+D+
Sbjct: 140  KVLQGYAGVLMPNTDQPFRLNWATFSMGDKR--------SDNGPDLSIFVGDLASDVSDS 191

Query: 1208 LLHETFVTRYPSVKGAKVVIDANTNRSKGYGFVRFGDDNERTQALNEMNGVYCSSRPMRI 1387
            LLHETF  +YPSVK AKVV DANT RSKGYGFVRFGD+NER+QA+ EMNGVYCSSRPMRI
Sbjct: 192  LLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRI 251

Query: 1388 GPATPRK-SGYQQYCPSPGPGGYSNRTSEQEGDSMNTT 1498
            G ATPRK SGYQQ   S G    +  + + +GDSMNTT
Sbjct: 252  GAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTT 289



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
 Frame = +2

Query: 848  NGENKTIWVGDLHHWMEEEYLRNCFASTR-EVASIKVIRNKQTGFSEGYGFVEFNTHAAA 1024
            NG + +I+VGDL   + +  L   FA     V + KV+ +  TG S+GYGFV F      
Sbjct: 173  NGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDEN-- 230

Query: 1025 EKVLQMYPHSVMPNTDQPFRINWAT--FSMGDKRXXXXXXXXXXXGSDL---------SI 1171
            E+   M   + +  + +P RI  AT   S G ++           G+ +         +I
Sbjct: 231  ERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTI 290

Query: 1172 FVGDLATDVTDALLHETFVTRYPSVKGAKVVIDANTNRSKGYGFVRFGDDNERTQALNEM 1351
            FVG L  +V+D  L + F ++Y  +   K+ +       KG GFV+F + N    AL ++
Sbjct: 291  FVGGLDPNVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKL 343

Query: 1352 NGVYCSSRPMRI 1387
            NG     + +R+
Sbjct: 344  NGTVIGKQTVRL 355


>ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1|
            predicted protein [Populus trichocarpa]
          Length = 429

 Score =  306 bits (785), Expect = 7e-81
 Identities = 156/218 (71%), Positives = 172/218 (78%), Gaps = 1/218 (0%)
 Frame = +2

Query: 848  NGENKTIWVGDLHHWMEEEYLRNCFASTREVASIKVIRNKQTGFSEGYGFVEFNTHAAAE 1027
            +GENKTIW+GDLHHWM+E YL +CF ST E+ASIKVIRNKQTG SEGYGFVEF THA AE
Sbjct: 89   SGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAE 148

Query: 1028 KVLQMYPHSVMPNTDQPFRINWATFSMGDKRXXXXXXXXXXXGSDLSIFVGDLATDVTDA 1207
            KVLQ Y   +MPNT+QPFR+NWATFS GDKR             DLSIFVGDLA DVTD+
Sbjct: 149  KVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDN--------APDLSIFVGDLAADVTDS 200

Query: 1208 LLHETFVTRYPSVKGAKVVIDANTNRSKGYGFVRFGDDNERTQALNEMNGVYCSSRPMRI 1387
            LL ETFV++YPSVK AKVV DANT RSKGYGFVRFGDD+ERTQA+ EMNGVYCSSRPMRI
Sbjct: 201  LLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRI 260

Query: 1388 GPATPRK-SGYQQYCPSPGPGGYSNRTSEQEGDSMNTT 1498
            G ATPRK SGYQQ     G  G S +  + +GDS NTT
Sbjct: 261  GAATPRKSSGYQQQ-GGYGSNGASAQGFQSDGDSNNTT 297



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
 Frame = +2

Query: 848  NGENKTIWVGDLHHWMEEEYLRNCFASTR-EVASIKVIRNKQTGFSEGYGFVEFNTHAAA 1024
            N  + +I+VGDL   + +  L+  F S    V + KV+ +  TG S+GYGFV F   +  
Sbjct: 182  NAPDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDS-- 239

Query: 1025 EKVLQMYPHSVMPNTDQPFRINWAT----------FSMGDKRXXXXXXXXXXXGSDLSIF 1174
            E+   M   + +  + +P RI  AT             G               ++ +IF
Sbjct: 240  ERTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQGGYGSNGASAQGFQSDGDSNNTTIF 299

Query: 1175 VGDLATDVTDALLHETFVTRYPSVKGAKVVIDANTNRSKGYGFVRFGDDNERTQALNEMN 1354
            VG L  +VTD  L + F ++Y  +   K+ +       KG GFV+F + +   +AL ++N
Sbjct: 300  VGGLDPNVTDEDLKQPF-SQYGEIVSVKIPV------GKGCGFVQFANRDNAEEALQKLN 352

Query: 1355 GVYCSSRPMRIG-PATPRKSGYQQYCPSPGPGGY 1453
            G     + +R+     P    ++    SP  G Y
Sbjct: 353  GTVIGKQTVRLSWGRNPANKQFRADFGSPWNGAY 386


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 443

 Score =  306 bits (784), Expect = 9e-81
 Identities = 152/216 (70%), Positives = 167/216 (77%)
 Frame = +2

Query: 851  GENKTIWVGDLHHWMEEEYLRNCFASTREVASIKVIRNKQTGFSEGYGFVEFNTHAAAEK 1030
            GEN+T+W+GDLHHWM+E YL  CFAST E+ SIKVIRNKQTG SEGYGFVEF THA AEK
Sbjct: 106  GENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEK 165

Query: 1031 VLQMYPHSVMPNTDQPFRINWATFSMGDKRXXXXXXXXXXXGSDLSIFVGDLATDVTDAL 1210
            VLQ Y   +MPNT+QPFR+NWATFS GDKR             DLSIFVGDLA DVTD+L
Sbjct: 166  VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDN--------APDLSIFVGDLAADVTDSL 217

Query: 1211 LHETFVTRYPSVKGAKVVIDANTNRSKGYGFVRFGDDNERTQALNEMNGVYCSSRPMRIG 1390
            LHETFV+RYPSVK AKVV DANT RSKGYGFVRFGDDNERTQA+ EMNGVYCSSR MRIG
Sbjct: 218  LHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIG 277

Query: 1391 PATPRKSGYQQYCPSPGPGGYSNRTSEQEGDSMNTT 1498
             ATPRKS   Q+       G S +  + +GDS NTT
Sbjct: 278  AATPRKSTGYQHQGGYVSNGASGQAFQADGDSTNTT 313


>ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
            [Glycine max]
          Length = 409

 Score =  303 bits (777), Expect = 6e-80
 Identities = 155/219 (70%), Positives = 169/219 (77%), Gaps = 2/219 (0%)
 Frame = +2

Query: 848  NGENKTIWVGDLHHWMEEEYLRNCFASTREVASIKVIRNKQTGFSEGYGFVEFNTHAAAE 1027
            + ENKT+WVGDLHHWM+E YL  CFAST E++SIKVIRNKQTG SEGYGFVEF +H  A+
Sbjct: 76   SAENKTVWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAD 135

Query: 1028 KVLQMYPHSVMPNTDQPFRINWATFSMGDKRXXXXXXXXXXXGSDLSIFVGDLATDVTDA 1207
            KVLQ Y   +MPNT+QPFR+NWATFS GDKR             DLSIFVGDLA DVTD+
Sbjct: 136  KVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNV--------PDLSIFVGDLAADVTDS 187

Query: 1208 LLHETFVTRYPSVKGAKVVIDANTNRSKGYGFVRFGDDNERTQALNEMNGVYCSSRPMRI 1387
            +LHETF  RYPSVK AKVV DANT RSKGYGFVRFGDDNER+QA+ EMNGVYCSSRPMRI
Sbjct: 188  MLHETFTNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRI 247

Query: 1388 GPATPRK-SGYQQYCPSPGPGGYSNRTSEQ-EGDSMNTT 1498
            G ATPRK SGYQQ       G  SN TS Q E DS NTT
Sbjct: 248  GAATPRKTSGYQQ-------GSQSNGTSSQSEADSTNTT 279


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