BLASTX nr result

ID: Lithospermum22_contig00000917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000917
         (1729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing fac...   152   3e-34
ref|NP_001242436.1| uncharacterized protein LOC100776329 [Glycin...   146   2e-32
ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-32
gb|AFK40774.1| unknown [Lotus japonicus]                              145   4e-32
ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...   144   7e-32

>ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
           max]
          Length = 176

 Score =  152 bits (384), Expect = 3e-34
 Identities = 73/102 (71%), Positives = 75/102 (73%)
 Frame = +1

Query: 229 MARVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFXXXXXXXXXXXXXXG 408
           M+RVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEF              G
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 409 KNGWRVELSHNSKXXXXXXXXXXXXSSKCYECGEPGHFAREC 534
           KNGWRVELSHNSK             +KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGRGGRGRGGEDTKCYECGEPGHFAREC 102


>ref|NP_001242436.1| uncharacterized protein LOC100776329 [Glycine max]
           gi|255640857|gb|ACU20711.1| unknown [Glycine max]
          Length = 177

 Score =  146 bits (368), Expect = 2e-32
 Identities = 70/102 (68%), Positives = 73/102 (71%)
 Frame = +1

Query: 229 MARVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFXXXXXXXXXXXXXXG 408
           M+RVYVGNL PRV+ERDLEDEFRIYGVL SVWVARRPPGYAFIEF              G
Sbjct: 1   MSRVYVGNLHPRVNERDLEDEFRIYGVLMSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 409 KNGWRVELSHNSKXXXXXXXXXXXXSSKCYECGEPGHFAREC 534
           KNGWRVELSHNSK             +KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGRGGRGRGGEDTKCYECGEPGHFAREC 102


>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  146 bits (368), Expect = 2e-32
 Identities = 72/106 (67%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
 Frame = +1

Query: 229 MARVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFXXXXXXXXXXXXXXG 408
           M+RVYVGNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAF+EF              G
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG 60

Query: 409 KNGWRVELSHNSK----XXXXXXXXXXXXSSKCYECGEPGHFAREC 534
           KNGWRVELSHNSK                 SKCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFAREC 106


>gb|AFK40774.1| unknown [Lotus japonicus]
          Length = 181

 Score =  145 bits (365), Expect = 4e-32
 Identities = 71/105 (67%), Positives = 74/105 (70%), Gaps = 3/105 (2%)
 Frame = +1

Query: 229 MARVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFXXXXXXXXXXXXXXG 408
           M+RVYVGNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAF+EF              G
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60

Query: 409 KNGWRVELSHNSKXXXXXXXXXXXXSS---KCYECGEPGHFAREC 534
           KNGWRVELSHNSK                 KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGGRGGGRGRGGEDLKCYECGEPGHFAREC 105


>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223525498|gb|EEF28060.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 184

 Score =  144 bits (363), Expect = 7e-32
 Identities = 72/109 (66%), Positives = 74/109 (67%), Gaps = 7/109 (6%)
 Frame = +1

Query: 229 MARVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFXXXXXXXXXXXXXXG 408
           MARVYVGNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAF+EF              G
Sbjct: 1   MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60

Query: 409 KNGWRVELSHNSK-------XXXXXXXXXXXXSSKCYECGEPGHFAREC 534
           KNGWRVELSHNSK                     KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFAREC 109


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