BLASTX nr result

ID: Lithospermum22_contig00000916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000916
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing fac...   154   4e-35
ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-35
ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...   152   2e-34
gb|AFK40774.1| unknown [Lotus japonicus]                              151   3e-34
ref|NP_001242436.1| uncharacterized protein LOC100776329 [Glycin...   148   3e-33

>ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
           max]
          Length = 176

 Score =  154 bits (389), Expect = 4e-35
 Identities = 74/104 (71%), Positives = 79/104 (75%)
 Frame = +2

Query: 137 MARVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFVEFXXXXXXXXXXXXLDG 316
           M+RVYVGNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAF+EF            LDG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 317 KNGWRVELSHNSKDXXXXXXXXXXXIDDSKCYECGEPGHFAREC 448
           KNGWRVELSHNSK             +D+KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGRGGRGRGG--EDTKCYECGEPGHFAREC 102


>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  154 bits (388), Expect = 5e-35
 Identities = 76/106 (71%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
 Frame = +2

Query: 137 MARVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFVEFXXXXXXXXXXXXLDG 316
           M+RVYVGNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAFVEF            LDG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG 60

Query: 317 KNGWRVELSHNSK--DXXXXXXXXXXXIDDSKCYECGEPGHFAREC 448
           KNGWRVELSHNSK               +DSKCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFAREC 106


>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223525498|gb|EEF28060.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 184

 Score =  152 bits (383), Expect = 2e-34
 Identities = 76/109 (69%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
 Frame = +2

Query: 137 MARVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFVEFXXXXXXXXXXXXLDG 316
           MARVYVGNLDPRVSERDLEDEFR+YGVLRSVWVARRPPGYAFVEF            LDG
Sbjct: 1   MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60

Query: 317 KNGWRVELSHNSK-----DXXXXXXXXXXXIDDSKCYECGEPGHFAREC 448
           KNGWRVELSHNSK                  +D KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFAREC 109


>gb|AFK40774.1| unknown [Lotus japonicus]
          Length = 181

 Score =  151 bits (382), Expect = 3e-34
 Identities = 75/105 (71%), Positives = 78/105 (74%), Gaps = 1/105 (0%)
 Frame = +2

Query: 137 MARVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFVEFXXXXXXXXXXXXLDG 316
           M+RVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAF+EF            LDG
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60

Query: 317 KNGWRVELSHNSK-DXXXXXXXXXXXIDDSKCYECGEPGHFAREC 448
           KNGWRVELSHNSK              +D KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGGRGGGRGRGGEDLKCYECGEPGHFAREC 105


>ref|NP_001242436.1| uncharacterized protein LOC100776329 [Glycine max]
           gi|255640857|gb|ACU20711.1| unknown [Glycine max]
          Length = 177

 Score =  148 bits (373), Expect = 3e-33
 Identities = 71/104 (68%), Positives = 77/104 (74%)
 Frame = +2

Query: 137 MARVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFVEFXXXXXXXXXXXXLDG 316
           M+RVYVGNL PRV+ERDLEDEFR+YGVL SVWVARRPPGYAF+EF            LDG
Sbjct: 1   MSRVYVGNLHPRVNERDLEDEFRIYGVLMSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 317 KNGWRVELSHNSKDXXXXXXXXXXXIDDSKCYECGEPGHFAREC 448
           KNGWRVELSHNSK             +D+KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGRGGRGRGG--EDTKCYECGEPGHFAREC 102


Top