BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000913
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_180615.1| photosystem II reaction center W protein [Arabi...   113   3e-23
ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arab...   113   4e-23
gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem I...   112   7e-23
emb|CAA62296.1| component of 6.1 kDa polypeptide of photosystem ...   112   9e-23
ref|XP_002282059.1| PREDICTED: photosystem II reaction center W ...   108   7e-22

>ref|NP_180615.1| photosystem II reaction center W protein [Arabidopsis thaliana]
           gi|122064936|sp|Q39194.2|PSBW_ARATH RecName:
           Full=Photosystem II reaction center W protein,
           chloroplastic; AltName: Full=PSII 6.1 kDa protein;
           Flags: Precursor gi|11762232|gb|AAG40394.1|AF325042_1
           At2g30570 [Arabidopsis thaliana]
           gi|14030715|gb|AAK53032.1|AF375448_1 At2g30570/T6B20.8
           [Arabidopsis thaliana] gi|1946362|gb|AAB63080.1|
           photosystem II reaction center 6.1KD protein
           [Arabidopsis thaliana] gi|21593002|gb|AAM64951.1|
           photosystem II reaction center 6.1KD protein
           [Arabidopsis thaliana] gi|23506075|gb|AAN28897.1|
           At2g30570/T6B20.8 [Arabidopsis thaliana]
           gi|330253315|gb|AEC08409.1| photosystem II reaction
           center W protein [Arabidopsis thaliana]
          Length = 133

 Score =  113 bits (283), Expect = 3e-23
 Identities = 68/124 (54%), Positives = 76/124 (61%)
 Frame = -2

Query: 566 MASFTACTSNISLARPALLHKGSTARPSTSVIGLPAMNPRMGKVSCSMNEKAEESNESKX 387
           MASFTA  S +S ARPALL K + A  S  V+GLP M  + G V CSM  K  + N S  
Sbjct: 1   MASFTASASTVSAARPALLLKPTVAI-SAPVLGLPPMGKKKGGVRCSMETK--QGNVS-V 56

Query: 386 XXXXXXXXXXXXXXXXXXXXXXALVDDRMSTEGTGLPFGLSNNLLGWILFGVFGLIWSLF 207
                                 ALVD+RMSTEGTGLPFGLSNNLLGWILFGVFGLIW+ F
Sbjct: 57  MGAGVSAAATAALTAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFF 116

Query: 206 FIYT 195
           F+YT
Sbjct: 117 FVYT 120


>ref|XP_002881119.1| hypothetical protein ARALYDRAFT_902045 [Arabidopsis lyrata subsp.
           lyrata] gi|297326958|gb|EFH57378.1| hypothetical protein
           ARALYDRAFT_902045 [Arabidopsis lyrata subsp. lyrata]
          Length = 133

 Score =  113 bits (282), Expect = 4e-23
 Identities = 66/124 (53%), Positives = 75/124 (60%)
 Frame = -2

Query: 566 MASFTACTSNISLARPALLHKGSTARPSTSVIGLPAMNPRMGKVSCSMNEKAEESNESKX 387
           MASFTA  S +S ARPA+L K + A  S  V+GLP M  + G V CSM  K  + N S  
Sbjct: 1   MASFTASASTVSAARPAILLKPTVA-VSAPVLGLPPMGKKKGGVRCSMETK--QGNVSAM 57

Query: 386 XXXXXXXXXXXXXXXXXXXXXXALVDDRMSTEGTGLPFGLSNNLLGWILFGVFGLIWSLF 207
                                  LVD+RMSTEGTGLPFGLSNNLLGWILFGVFGLIW+ F
Sbjct: 58  GAGVSAAATAALTAVMSNPAMA-LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFF 116

Query: 206 FIYT 195
           F+YT
Sbjct: 117 FVYT 120


>gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem II reaction center
           [Brassica rapa]
          Length = 133

 Score =  112 bits (280), Expect = 7e-23
 Identities = 67/124 (54%), Positives = 74/124 (59%)
 Frame = -2

Query: 566 MASFTACTSNISLARPALLHKGSTARPSTSVIGLPAMNPRMGKVSCSMNEKAEESNESKX 387
           MASFTA  S +S+ARPALL K + A  S  V+GLP M  R G V CSM  K  + N S  
Sbjct: 1   MASFTASASTVSVARPALLLKPTVA-VSAPVLGLPPMGKRKGGVRCSMEPK--QGNVSAV 57

Query: 386 XXXXXXXXXXXXXXXXXXXXXXALVDDRMSTEGTGLPFGLSNNLLGWILFGVFGLIWSLF 207
                                  LVDDRMSTEGTGLPFGLSNNLLGWIL GVFGLIW+ +
Sbjct: 58  GAGVSAAATAALTAVMSNPAMA-LVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFY 116

Query: 206 FIYT 195
           F YT
Sbjct: 117 FTYT 120


>emb|CAA62296.1| component of 6.1 kDa polypeptide of photosystem II reaction center
           [Arabidopsis thaliana]
          Length = 133

 Score =  112 bits (279), Expect = 9e-23
 Identities = 68/124 (54%), Positives = 75/124 (60%)
 Frame = -2

Query: 566 MASFTACTSNISLARPALLHKGSTARPSTSVIGLPAMNPRMGKVSCSMNEKAEESNESKX 387
           MASFTA  S +S ARPALL K + A  S  V+GLP M  + G V CSM  K  + N S  
Sbjct: 1   MASFTASASTVSAARPALLLKPTVAI-SAPVLGLPPMGKKKGGVRCSMETK--QGNVS-V 56

Query: 386 XXXXXXXXXXXXXXXXXXXXXXALVDDRMSTEGTGLPFGLSNNLLGWILFGVFGLIWSLF 207
                                 ALVD+RMSTEGTGLPFGLSNNLLGWILFGVFGLIW+ F
Sbjct: 57  MGAGVSAAATAALTAVMSNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFF 116

Query: 206 FIYT 195
           F YT
Sbjct: 117 FAYT 120


>ref|XP_002282059.1| PREDICTED: photosystem II reaction center W protein, chloroplastic
           [Vitis vinifera] gi|297735504|emb|CBI17944.3| unnamed
           protein product [Vitis vinifera]
          Length = 135

 Score =  108 bits (271), Expect = 7e-22
 Identities = 62/124 (50%), Positives = 74/124 (59%)
 Frame = -2

Query: 566 MASFTACTSNISLARPALLHKGSTARPSTSVIGLPAMNPRMGKVSCSMNEKAEESNESKX 387
           MAS TA T   SL R  L   G T   S++++GLP M  + G+V+CSM EK    + S  
Sbjct: 1   MASITASTPTSSLPRVGLRPNGGTVGTSSAILGLPVM-AKKGRVTCSMKEKPSVEDGS-L 58

Query: 386 XXXXXXXXXXXXXXXXXXXXXXALVDDRMSTEGTGLPFGLSNNLLGWILFGVFGLIWSLF 207
                                 ALVD+RMSTEGTGLPFGLSNN LGWILFGVFGLIW+L+
Sbjct: 59  KMGMGASLMAAACAATMSSPAMALVDERMSTEGTGLPFGLSNNTLGWILFGVFGLIWALY 118

Query: 206 FIYT 195
           F+YT
Sbjct: 119 FVYT 122