BLASTX nr result

ID: Lithospermum22_contig00000883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000883
         (1053 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; Al...   311   2e-82
ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   308   1e-81
ref|XP_002299962.1| predicted protein [Populus trichocarpa] gi|2...   306   4e-81
ref|XP_003531428.1| PREDICTED: 60S ribosomal protein L6-like [Gl...   305   2e-80
ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   305   2e-80

>sp|P34091.1|RL6_MESCR RecName: Full=60S ribosomal protein L6; AltName: Full=YL16-like
           gi|19539|emb|CAA49175.1| ribosomal protein YL16
           [Mesembryanthemum crystallinum]
          Length = 234

 Score =  311 bits (796), Expect = 2e-82
 Identities = 163/234 (69%), Positives = 177/234 (75%), Gaps = 2/234 (0%)
 Frame = -3

Query: 946 MAPKQARK--APRNPDLIRGLGKFSRSKMYHKRGLWAIKAKNGGAFPTHKKATVPTKEAE 773
           MA  + RK    RNP+L+RG+GK+SRSKMYHKRGLWAIKAKNGG FP H   +  +K  E
Sbjct: 1   MAAAKQRKPHVSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVE 60

Query: 772 EKLKFYPADDVKKPLANRRKERPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLSSGLLL 593
           +  KFYPADDVKKPL N+RK +PTKLR+SITPGTVLIIL GRFKGKRVVFLKQLSSGLLL
Sbjct: 61  KPPKFYPADDVKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLL 120

Query: 592 VTGPFKVNGVPLRRVNQAYVIATSTKVDISSVNXXXXXXXXXXXXXXXXXXXXXXXXXXX 413
           VTGPFKVNGVPLRRVNQAYVIATSTKVDIS VN                           
Sbjct: 121 VTGPFKVNGVPLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEA 180

Query: 412 XXXXKNVLPTEKKDDQKAVDTSLIKAIESVPELKAYLGARFSLKSGMKPHELVF 251
                NVLP EKKDDQKAVD +L+KAIE VPELKAYLGARFSLK+GMKPHELVF
Sbjct: 181 EKKEVNVLPQEKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234


>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  308 bits (790), Expect = 1e-81
 Identities = 161/233 (69%), Positives = 177/233 (75%), Gaps = 1/233 (0%)
 Frame = -3

Query: 946 MAPK-QARKAPRNPDLIRGLGKFSRSKMYHKRGLWAIKAKNGGAFPTHKKATVPTKEAEE 770
           MAPK +  K  RNPDL+RG+GK+SRS+MYHKRGLWAIKAKNGG FP H     P   AE+
Sbjct: 1   MAPKTRTPKVNRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPAAPAEK 60

Query: 769 KLKFYPADDVKKPLANRRKERPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLSSGLLLV 590
             KFYPADDVKKPL N+RK +PTKLR+SITPGTVLIIL GRFKGKRVVFLKQLSSGLLL+
Sbjct: 61  PPKFYPADDVKKPLLNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLI 120

Query: 589 TGPFKVNGVPLRRVNQAYVIATSTKVDISSVNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 410
           TGPFK+NGVPLRRVNQ+YVIATSTKVDIS VN                            
Sbjct: 121 TGPFKINGVPLRRVNQSYVIATSTKVDISGVNVDKFDDKFFAKQAEKKKKKGEGEFFEAE 180

Query: 409 XXXKNVLPTEKKDDQKAVDTSLIKAIESVPELKAYLGARFSLKSGMKPHELVF 251
              KNVLP EKKDDQK VD +LIK+IE+VPELKAYL ARFSLK+GMKPHELVF
Sbjct: 181 KDEKNVLPQEKKDDQKTVDAALIKSIEAVPELKAYLAARFSLKAGMKPHELVF 233


>ref|XP_002299962.1| predicted protein [Populus trichocarpa] gi|222847220|gb|EEE84767.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  306 bits (785), Expect = 4e-81
 Identities = 160/233 (68%), Positives = 177/233 (75%), Gaps = 1/233 (0%)
 Frame = -3

Query: 946 MAPKQARKAPRNPDLIRGLGKFSRSKMYHKRGLWAIKAKNGGAFPTH-KKATVPTKEAEE 770
           MAP++  +  RNPDL+RG+GK+SRS+MYHKRGLWAIKAKNGG FP H  KA  PT  AE+
Sbjct: 1   MAPRKTPQVTRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHAPKAKAPT-SAEK 59

Query: 769 KLKFYPADDVKKPLANRRKERPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLSSGLLLV 590
             KFYPADDVKKPL N+RK +PTKLR SITPGTVLIIL GRFKGKRVVFLKQL+SGLLLV
Sbjct: 60  PPKFYPADDVKKPLPNKRKPKPTKLRDSITPGTVLIILAGRFKGKRVVFLKQLTSGLLLV 119

Query: 589 TGPFKVNGVPLRRVNQAYVIATSTKVDISSVNXXXXXXXXXXXXXXXXXXXXXXXXXXXX 410
           TGPFK+NGVPLRRVNQ+Y+IATSTKVDIS VN                            
Sbjct: 120 TGPFKINGVPLRRVNQSYLIATSTKVDISGVNVEKFDDKYFAKKAEKKKKKGEDNFFEGE 179

Query: 409 XXXKNVLPTEKKDDQKAVDTSLIKAIESVPELKAYLGARFSLKSGMKPHELVF 251
              +N LP EKKDDQK VD  +IK+IESVPELKAYLGARFSLK GMKPHELVF
Sbjct: 180 KEGENALPQEKKDDQKLVDAQVIKSIESVPELKAYLGARFSLKDGMKPHELVF 232


>ref|XP_003531428.1| PREDICTED: 60S ribosomal protein L6-like [Glycine max]
          Length = 232

 Score =  305 bits (780), Expect = 2e-80
 Identities = 155/232 (66%), Positives = 174/232 (75%)
 Frame = -3

Query: 946 MAPKQARKAPRNPDLIRGLGKFSRSKMYHKRGLWAIKAKNGGAFPTHKKATVPTKEAEEK 767
           MAPK+ R   RNPDL+RG+GK+SRS+MYHKRG+WAIKAKNGG  P H     P   A++ 
Sbjct: 1   MAPKKPRTTSRNPDLVRGIGKYSRSQMYHKRGIWAIKAKNGGVLPLHDPKPKPEAPAQKP 60

Query: 766 LKFYPADDVKKPLANRRKERPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLSSGLLLVT 587
            KFYPADDVKKPL N+ K +P KLR+SITPGTVLI+L GRFKGKRVVFLKQL SGLLLVT
Sbjct: 61  PKFYPADDVKKPLVNKHKPKPAKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVT 120

Query: 586 GPFKVNGVPLRRVNQAYVIATSTKVDISSVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 407
           GPFK+NGVPLRRVNQ+YVI TSTKVDIS VN                             
Sbjct: 121 GPFKINGVPLRRVNQSYVIGTSTKVDISDVNVDKFDDKYFAKEAKKKKTKGEGEFFEAEK 180

Query: 406 XXKNVLPTEKKDDQKAVDTSLIKAIESVPELKAYLGARFSLKSGMKPHELVF 251
             KNVLP EKKDDQK VDT+L+KAIESVPELK+YLGARFSLK+G+KPHELVF
Sbjct: 181 EEKNVLPQEKKDDQKTVDTALLKAIESVPELKSYLGARFSLKAGVKPHELVF 232


>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  305 bits (780), Expect = 2e-80
 Identities = 159/232 (68%), Positives = 176/232 (75%)
 Frame = -3

Query: 946 MAPKQARKAPRNPDLIRGLGKFSRSKMYHKRGLWAIKAKNGGAFPTHKKATVPTKEAEEK 767
           MAPK  R + RNP+L+RG+GK+SRS+MYHKRGLWAIKAKNGG FP H     P   AE+ 
Sbjct: 1   MAPKTPRIS-RNPNLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPASPAEKP 59

Query: 766 LKFYPADDVKKPLANRRKERPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLSSGLLLVT 587
            KFYPADD+KKPL N+RK +PTKLR+SITPGTVLIIL GRFKGKRVVFLKQLSSGLLLVT
Sbjct: 60  PKFYPADDIKKPLHNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVT 119

Query: 586 GPFKVNGVPLRRVNQAYVIATSTKVDISSVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 407
           GPFK+NGVPLRRVNQ+YVIATSTKVDIS VN                             
Sbjct: 120 GPFKINGVPLRRVNQSYVIATSTKVDISGVNADKFDDKYFAKQAEKRKKKGEGEFFEAEK 179

Query: 406 XXKNVLPTEKKDDQKAVDTSLIKAIESVPELKAYLGARFSLKSGMKPHELVF 251
             KNVLP EKKDDQK +D +LIK+IE VPELKAYL ARFSLK+GMKPHELVF
Sbjct: 180 EEKNVLPQEKKDDQKTLDAALIKSIEGVPELKAYLAARFSLKAGMKPHELVF 231


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