BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000799
         (3389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding prote...   453   e-124
emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]                   416   e-113
ref|NP_177856.2| topoisomerase (DNA) II binding protein 1 [Arabi...   416   e-113
emb|CBI18968.3| unnamed protein product [Vitis vinifera]              404   e-110
ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|22354...   400   e-108

>ref|XP_003548358.1| PREDICTED: DNA topoisomerase 2-binding protein 1-A-like [Glycine max]
          Length = 970

 Score =  453 bits (1165), Expect = e-124
 Identities = 236/392 (60%), Positives = 292/392 (74%), Gaps = 11/392 (2%)
 Frame = +3

Query: 3    RPLPNQGFTCCLAMDGVKVIASGFDIDEKVEIGKLVAGMGGVLQVRSSADISFVIVKNVL 182
            RPLP QGFTCCLAMDGVKV+ASGFD DEKV+I +LVA MGGVL  ++S D++FV+VKNVL
Sbjct: 87   RPLPKQGFTCCLAMDGVKVLASGFDTDEKVKIEELVAEMGGVLHTKASLDLNFVVVKNVL 146

Query: 183  AAKYKLALNDLKKPIVTKDWVYQCWKEHRVVPQESYKVLPFSGLRICVSRIPAVERKEME 362
            AAKYK ALN LKKPIVT +W+ QC  EHRVVPQESYKVLPFSGL+ICV+ IPA  RKEME
Sbjct: 147  AAKYKWALNILKKPIVTYEWLKQCSDEHRVVPQESYKVLPFSGLKICVTGIPADNRKEME 206

Query: 363  KLILQNGGKYSAELTRKCTHLVCDAPEGDKYVVAKQWGHILIVTRKWFDQSLSRRVCLNE 542
            KLILQNGGKYSAELT+KCTHL+ +APEGDKY VAK+WGHI IVTRKWFDQS++R+ CLNE
Sbjct: 207  KLILQNGGKYSAELTKKCTHLISEAPEGDKYKVAKRWGHIHIVTRKWFDQSIARKACLNE 266

Query: 543  ESYPVQSTPASSLSISRK-KARHSQETSSGISQCAKPSAGMASSSEL--CGPTISQDPEV 713
            E + VQ    SS  ++R    +HSQE   G    A  S    S+ ++  C   + +D E 
Sbjct: 267  ELFAVQHGSVSSHKVTRDLTMQHSQEKDFGKLHSAASSGATDSNVQVFSCAEFMDRDLEA 326

Query: 714  TVSHNIFTVVSEVSMFNNDGEXXXXXXXXXXXXXNASEPNVDIPLNNC--------IAND 869
            T S ++ + VS V +F  + +               SEP   +PL  C        +AND
Sbjct: 327  TQSEHM-SSVSNVPLFAKEAD---------------SEP---LPLQTCSELNFDGAVAND 367

Query: 870  SQTEDNDLYLSECRITIVGFEASELRKLVSIVRRGGGSRYMHFNEKLTHIVVGSPSEIEI 1049
            S+++DNDLYLSECRI +VGFEA E+RKLV++VR+GGGSRYM FN+KLTHIV+G+P+E+E 
Sbjct: 368  SESDDNDLYLSECRILLVGFEACEMRKLVNMVRKGGGSRYMSFNDKLTHIVIGNPTEMEK 427

Query: 1050 RETRTLASRGIIHVVKKEWLEDCDREKKEFPV 1145
            ++ R+LA+ G+I+VVK  WLEDCDREKK+ PV
Sbjct: 428  KDVRSLAALGVIYVVKTAWLEDCDREKKQVPV 459



 Score =  362 bits (929), Expect = 4e-97
 Identities = 197/428 (46%), Positives = 266/428 (62%), Gaps = 14/428 (3%)
 Frame = +2

Query: 1460 KSSNVFKGRLFRFSPSFPAARRGEIIQWINEGGGQIFGDCIDIDSDFTVECHGVVPS--- 1630
            KS+NVF+G+LF FS  +P  +RGE++QWI +GGG+I        + +T+ECHGV P+   
Sbjct: 559  KSANVFRGKLFCFSNLYPEEKRGEVVQWITQGGGEIISGQTKQSTYYTIECHGVTPTLTR 618

Query: 1631 DAGSVYVSSHWVKSSLEDGRLLDVGSHILYSPLPCQIPFVSLEKFKICISQYNEKERSLL 1810
            D+ S+Y+SSHW++S LE G LLDV SHILYSPLPC++P    E F+ C SQY+EK+R+LL
Sbjct: 619  DSKSLYISSHWIRSCLEAGSLLDVDSHILYSPLPCRVPLPGFESFRFCFSQYDEKDRNLL 678

Query: 1811 KNLCFVLGTKFTEKLTKSVTHLLCKFASGPKYEASCKWGMQSVTAEWLYECIKQNKVIDP 1990
            +NLCF LG K+ EKLTK VTHLLCKF +GPKYEA+CKWG+QSVT+EW++EC+KQN V+  
Sbjct: 679  RNLCFHLGAKYGEKLTKKVTHLLCKFTNGPKYEAACKWGIQSVTSEWIFECVKQNGVVAI 738

Query: 1991 DPFHPKQATSQEREAGLCTMSQYPTQAFQMTSGDNASQLPIQSEELKNVQNESHPRKVVG 2170
            D F PK+ T+Q+R+AG+CT+SQ+PTQA QM S D  SQL  QS+ L+   N++    V  
Sbjct: 739  DQFLPKEVTAQDRDAGICTVSQFPTQAVQMIS-DLPSQLSSQSQTLRGTTNKNVSCGVDN 797

Query: 2171 FEETVPPSSCRKREASIAENPTSMLSSVSKQFDHGLTVLSTKNMEESAKVV---SEFH-- 2335
             E +    S   ++A + E P   LS+      +       KN  +   ++     FH  
Sbjct: 798  HETSFRIPSNYSKKARLVEEP--CLSNKKPSASNSGIHADDKNFSKDNMLIDAGEAFHAV 855

Query: 2336 -DDVAAIEDLLEQTSTISDHMS-----TEISLFPFDGSLRGQASDCTIRDQATDFSIRGL 2497
             D  AAIEDLLEQTS + D  S      E S++P D S+  +                  
Sbjct: 856  PDVAAAIEDLLEQTSKMHDQRSPAQTGCERSIYPSDRSVLSE------------------ 897

Query: 2498 DDVDPSSYTKVQMDCINRPARNFDKINLPRTVATEAYDNFSETQTDSQIVGYAEDLSGRQ 2677
            D+ +P +   +    +NR  R  D     +      YD FSETQT+SQ+V Y EDLSGRQ
Sbjct: 898  DNSNPHTVFGLSKHWLNRSGRKDDNGEASQDRRAGIYDGFSETQTESQVVSYEEDLSGRQ 957

Query: 2678 MIIDRVRS 2701
            M+IDRVR+
Sbjct: 958  MLIDRVRT 965


>emb|CAD54082.1| MEI1 protein [Arabidopsis thaliana]
          Length = 972

 Score =  416 bits (1068), Expect = e-113
 Identities = 218/384 (56%), Positives = 268/384 (69%), Gaps = 3/384 (0%)
 Frame = +3

Query: 3    RPLPNQGFTCCLAMDGVKVIASGFDIDEKVEIGKLVAGMGGVLQVRSSADISFVIVKNVL 182
            RPLP +GFTCCLAMDG+KV+ASGF +DEKV+I +LV  MGGVL  R+S+D++FVIVKNVL
Sbjct: 87   RPLPQRGFTCCLAMDGLKVLASGFLVDEKVKIKELVTSMGGVLLSRASSDVNFVIVKNVL 146

Query: 183  AAKYKLALNDLKKPIVTKDWVYQCWKEHRVVPQESYKVLPFSGLRICVSRIPAVERKEME 362
            AAKYK ALN  KKPIVT +W+++CW EHRVVPQE YK+ PFSGL ICV+RIPA ERK ME
Sbjct: 147  AAKYKWALN--KKPIVTLNWLHRCWNEHRVVPQEPYKIPPFSGLTICVTRIPADERKGME 204

Query: 363  KLILQNGGKYSAELTRKCTHLVCDAPEGDKYVVAKQWGHILIVTRKWFDQSLSRRVCLNE 542
            K+I + GG YSAELT+ CTHL+ DA EGDKY VA++WGHI IVTRKWF QS+ ++VCLNE
Sbjct: 205  KVISEYGGSYSAELTKSCTHLIADAAEGDKYKVARKWGHIQIVTRKWFQQSIDKKVCLNE 264

Query: 543  ESYPVQSTPASSLSISRKKARHSQETSSGISQCAKPSAGMASSSE---LCGPTISQDPEV 713
            ESYPV        SI   +        +G+ +   PSA  AS+++    C  +   D E 
Sbjct: 265  ESYPVLG------SIPLTRGVRDLGVHNGLEKF--PSAATASAADSYVSCAQSRDSDIEA 316

Query: 714  TVSHNIFTVVSEVSMFNNDGEXXXXXXXXXXXXXNASEPNVDIPLNNCIANDSQTEDNDL 893
            + S N+F      S                       E N+D     C A DS++EDNDL
Sbjct: 317  SASQNVFPTSMNPS--------TDVKEPGGGPTARPQEQNID----GCTARDSESEDNDL 364

Query: 894  YLSECRITIVGFEASELRKLVSIVRRGGGSRYMHFNEKLTHIVVGSPSEIEIRETRTLAS 1073
            YLS+CRI ++GFEASE+RKL  +VRRGGGSRYM  NE++THIVVG+PSE E RE R++A+
Sbjct: 365  YLSDCRIFLLGFEASEMRKLAKLVRRGGGSRYMLLNERMTHIVVGTPSESEKREARSVAA 424

Query: 1074 RGIIHVVKKEWLEDCDREKKEFPV 1145
             G+I VV   WLEDCDREKKE PV
Sbjct: 425  SGVIQVVIPSWLEDCDREKKEIPV 448



 Score =  303 bits (776), Expect = 2e-79
 Identities = 196/494 (39%), Positives = 269/494 (54%), Gaps = 20/494 (4%)
 Frame = +2

Query: 1289 EGKPSAVSFSAEPEIFVNKEIPIRATSNYIEQPTMSSL---NGKGPLKVQPSSGIEIDER 1459
            + K +   F  + EI   ++I      +  ++ T+ SL     K    +Q     + D+ 
Sbjct: 509  KNKEAMQEFGRKDEIHTGRKIV-----SPTQKETLISLVTCESKEQQSIQCEFSGQNDQE 563

Query: 1460 KSSNVFKGRLFRFSPSFPAARRGEIIQWINEGGGQIFGDCIDIDSDFTVECHGVVPSD-- 1633
            + S+VFKG  F FS SFP  RR +I++W+N+GGG++  D +  ++DFT+ECHG   S   
Sbjct: 564  RKSSVFKGETFCFSHSFPEDRRPQIVEWVNQGGGEVVNDPLINNADFTIECHGGFQSTET 623

Query: 1634 AGSVYVSSHWVKSSLEDGRLLDVGSHILYSPLPCQIPFVSLEKFKICISQYNEKERSLLK 1813
              ++YVSSHWV++ L+ G LL V SHILYSPLPCQ P    E   IC SQ+NEK   LL+
Sbjct: 624  TQTIYVSSHWVRNCLKVGCLLAVSSHILYSPLPCQTPLPGFESLCICSSQHNEKNVELLR 683

Query: 1814 NLCFVLGTKFTEKLTKSVTHLLCKFASGPKYEASCKWGMQSVTAEWLYECIKQNKVIDPD 1993
            NL  VLG  F E+LT+ VTHL+C FA G KY  + KWG+ SVT +WLYEC++QN+V+  D
Sbjct: 684  NLSVVLGADFVERLTRKVTHLICNFAKGDKYVRASKWGIISVTPDWLYECVRQNQVVCTD 743

Query: 1994 PFHPKQATSQEREAGLCTMSQYPTQAFQMTSGDNASQLPIQSEELKNVQN---------- 2143
             FHP++ T+Q+REAG    SQ+ TQ   M S D+ S     SE+ + +Q+          
Sbjct: 744  NFHPRELTTQDREAG----SQFHTQFVPMASRDSMSLPVSHSEDREKIQSFAGKSGCGKG 799

Query: 2144 ESHPR-KVVGFEETVPPSSCR-KREASIAE-NPTSMLSSVSKQFDHGLTVLSTKNMEESA 2314
            E + R   +G E+T P    +  R+   ++  P   L S   +  H    + T     S 
Sbjct: 800  EVYNRLGEIGKEQTFPSKKAKLLRDGQESDVFPVRELPSNCDRPSHSGDGIVTGYDVASG 859

Query: 2315 KVVSEFHDDVAAIEDLLEQTSTISDHMSTEISLFPFDGSLRGQASDCTIRDQATDFSIRG 2494
            + V +  D    IEDLLEQTS I D  S    L                  + T FS   
Sbjct: 860  REVPDVAD---TIEDLLEQTSKIQDQKSPGRIL------------------EKTHFSTSE 898

Query: 2495 LDDVDPSSYTKVQMDCINRPARNFDKINLPRTVATEAYDNFSETQTDSQIVGYAEDLSGR 2674
              +    S T +    INR  +N D  + P    T+ Y NFSETQT+SQ+VGY EDLSGR
Sbjct: 899  QYNTGNHSVTGLSRHWINRVHKNDDMGSPPGDATTDTYGNFSETQTESQVVGYEEDLSGR 958

Query: 2675 QMIIDRV--RSSMT 2710
            QM+IDRV  RSS+T
Sbjct: 959  QMLIDRVRTRSSLT 972


>ref|NP_177856.2| topoisomerase (DNA) II binding protein 1 [Arabidopsis thaliana]
            gi|332197842|gb|AEE35963.1| topoisomerase (DNA) II
            binding protein 1 [Arabidopsis thaliana]
          Length = 972

 Score =  416 bits (1068), Expect = e-113
 Identities = 218/384 (56%), Positives = 268/384 (69%), Gaps = 3/384 (0%)
 Frame = +3

Query: 3    RPLPNQGFTCCLAMDGVKVIASGFDIDEKVEIGKLVAGMGGVLQVRSSADISFVIVKNVL 182
            RPLP +GFTCCLAMDG+KV+ASGF +DEKV+I +LV  MGGVL  R+S+D++FVIVKNVL
Sbjct: 87   RPLPQRGFTCCLAMDGLKVLASGFLVDEKVKIKELVTSMGGVLLSRASSDVNFVIVKNVL 146

Query: 183  AAKYKLALNDLKKPIVTKDWVYQCWKEHRVVPQESYKVLPFSGLRICVSRIPAVERKEME 362
            AAKYK ALN  KKPIVT +W+++CW EHRVVPQE YK+ PFSGL ICV+RIPA ERK ME
Sbjct: 147  AAKYKWALN--KKPIVTLNWLHRCWNEHRVVPQEPYKIPPFSGLTICVTRIPADERKGME 204

Query: 363  KLILQNGGKYSAELTRKCTHLVCDAPEGDKYVVAKQWGHILIVTRKWFDQSLSRRVCLNE 542
            K+I + GG YSAELT+ CTHL+ DA EGDKY VA++WGHI IVTRKWF QS+ ++VCLNE
Sbjct: 205  KVISEYGGSYSAELTKSCTHLIADAAEGDKYKVARKWGHIQIVTRKWFQQSIDKKVCLNE 264

Query: 543  ESYPVQSTPASSLSISRKKARHSQETSSGISQCAKPSAGMASSSE---LCGPTISQDPEV 713
            ESYPV        SI   +        +G+ +   PSA  AS+++    C  +   D E 
Sbjct: 265  ESYPVLG------SIPLTRGVRDLGVHNGLEKF--PSAATASAADSYVSCAQSRDSDIEA 316

Query: 714  TVSHNIFTVVSEVSMFNNDGEXXXXXXXXXXXXXNASEPNVDIPLNNCIANDSQTEDNDL 893
            + S N+F      S                       E N+D     C A DS++EDNDL
Sbjct: 317  SASQNVFPTSMNPS--------TDVKEPGGGPTARPQEQNID----GCTARDSESEDNDL 364

Query: 894  YLSECRITIVGFEASELRKLVSIVRRGGGSRYMHFNEKLTHIVVGSPSEIEIRETRTLAS 1073
            YLS+CRI ++GFEASE+RKL  +VRRGGGSRYM  NE++THIVVG+PSE E RE R++A+
Sbjct: 365  YLSDCRIFLLGFEASEMRKLAKLVRRGGGSRYMLLNERMTHIVVGTPSESEKREARSVAA 424

Query: 1074 RGIIHVVKKEWLEDCDREKKEFPV 1145
             G+I VV   WLEDCDREKKE PV
Sbjct: 425  SGVIQVVIPSWLEDCDREKKEIPV 448



 Score =  300 bits (769), Expect = 1e-78
 Identities = 195/494 (39%), Positives = 268/494 (54%), Gaps = 20/494 (4%)
 Frame = +2

Query: 1289 EGKPSAVSFSAEPEIFVNKEIPIRATSNYIEQPTMSSL---NGKGPLKVQPSSGIEIDER 1459
            + K +   F  + EI   ++I      +  ++ T+ SL     K    +Q     + D+ 
Sbjct: 509  KNKEAMQEFGRKDEIHTGRKIV-----SPTQKETLISLVTCESKEQRSIQCEFSGQNDQE 563

Query: 1460 KSSNVFKGRLFRFSPSFPAARRGEIIQWINEGGGQIFGDCIDIDSDFTVECHGVVPSD-- 1633
            + S+VFKG  F FS SFP  RR +I++W+N+GGG++  D +  ++ FT+ECHG   S   
Sbjct: 564  RKSSVFKGETFCFSHSFPEDRRPQIVEWVNQGGGEVVNDPLINNAHFTIECHGGFQSTET 623

Query: 1634 AGSVYVSSHWVKSSLEDGRLLDVGSHILYSPLPCQIPFVSLEKFKICISQYNEKERSLLK 1813
              ++YVSSHWV++ L+ G LL V SHILYSPLPCQ P    E   IC SQ+NEK   LL+
Sbjct: 624  TQTIYVSSHWVRNCLKVGCLLAVSSHILYSPLPCQTPLPGFESLCICSSQHNEKNVELLR 683

Query: 1814 NLCFVLGTKFTEKLTKSVTHLLCKFASGPKYEASCKWGMQSVTAEWLYECIKQNKVIDPD 1993
            NL  VLG  F E+LT+ VTHL+C FA G KY  + KWG+ SVT +WLYEC++QN+V+  D
Sbjct: 684  NLSVVLGADFVERLTRKVTHLICNFAKGDKYVRASKWGIISVTPDWLYECVRQNQVVCTD 743

Query: 1994 PFHPKQATSQEREAGLCTMSQYPTQAFQMTSGDNASQLPIQSEELKNVQN---------- 2143
             FHP++ T+Q+REAG    SQ+ TQ   M S D+ S     SE+ + +Q+          
Sbjct: 744  NFHPRELTTQDREAG----SQFHTQFVPMASRDSMSLPVSHSEDREKIQSFAGKSGCGKG 799

Query: 2144 ESHPR-KVVGFEETVPPSSCR-KREASIAE-NPTSMLSSVSKQFDHGLTVLSTKNMEESA 2314
            E + R   +G E+T P    +  R+   ++  P   L S   +  H    + T     S 
Sbjct: 800  EVYNRLGEIGKEQTFPSKKAKLLRDGQESDVFPVRELPSNCDRPSHSGDGIVTGYDVASG 859

Query: 2315 KVVSEFHDDVAAIEDLLEQTSTISDHMSTEISLFPFDGSLRGQASDCTIRDQATDFSIRG 2494
            + V +  D    IEDLLEQTS I D  S    L                  + T FS   
Sbjct: 860  REVPDVAD---TIEDLLEQTSKIQDQKSPGRIL------------------EKTHFSTSE 898

Query: 2495 LDDVDPSSYTKVQMDCINRPARNFDKINLPRTVATEAYDNFSETQTDSQIVGYAEDLSGR 2674
              +    S T +    INR  +N D  + P    T+ Y NFSETQT+SQ+VGY EDLSGR
Sbjct: 899  QYNTGNHSVTGLSRHWINRVHKNDDMGSPPGDATTDTYGNFSETQTESQVVGYEEDLSGR 958

Query: 2675 QMIIDRV--RSSMT 2710
            QM+IDRV  RSS+T
Sbjct: 959  QMLIDRVRTRSSLT 972


>emb|CBI18968.3| unnamed protein product [Vitis vinifera]
          Length = 952

 Score =  404 bits (1039), Expect = e-110
 Identities = 214/384 (55%), Positives = 264/384 (68%), Gaps = 3/384 (0%)
 Frame = +3

Query: 3    RPLPNQGFTCCLAMDGVKVIASGFDIDEKVEIGKLVAGMGGVLQVRSSADISFVIVKNVL 182
            RPLP QGFTCCLAMDGVKV+ASGFD+DEKV+IGKLV  MGGVL  ++S+D++ +    +L
Sbjct: 87   RPLPKQGFTCCLAMDGVKVLASGFDMDEKVKIGKLVTAMGGVLHTKASSDVNLISCLILL 146

Query: 183  AAKY-KLALNDLKKPIVTKDWVYQCWKEHRVVPQESYKVLPFSGLRICVSRIPAVERKEM 359
               + + A N LKKPIVT +W++QCW EHRVVPQESY+VLPFSGL ICV++IPA ERKEM
Sbjct: 147  LYVFLQWASNILKKPIVTINWLHQCWTEHRVVPQESYRVLPFSGLTICVTKIPADERKEM 206

Query: 360  EKLILQNGGKYSAELTRKCTHLVCD--APEGDKYVVAKQWGHILIVTRKWFDQSLSRRVC 533
            E LI QNGGKYSA+LTR CTHL+ D  +PEGDKY VA++WGHI IVTRKWFDQS++R+ C
Sbjct: 207  EILIKQNGGKYSADLTRNCTHLITDISSPEGDKYKVARRWGHIHIVTRKWFDQSIARKAC 266

Query: 534  LNEESYPVQSTPASSLSISRKKARHSQETSSGISQCAKPSAGMASSSELCGPTISQDPEV 713
            +NEESY VQ   ASS++  R     SQ            S+ +A+ S L  P + QD + 
Sbjct: 267  VNEESYTVQGGTASSINSVRTHLTASQSQDKSNVNFQSASSSLAADSNLQAPAM-QDKD- 324

Query: 714  TVSHNIFTVVSEVSMFNNDGEXXXXXXXXXXXXXNASEPNVDIPLNNCIANDSQTEDNDL 893
                                                     +  L+  +A+DSQTED+DL
Sbjct: 325  -----------------------------------------ENKLDGLVADDSQTEDSDL 343

Query: 894  YLSECRITIVGFEASELRKLVSIVRRGGGSRYMHFNEKLTHIVVGSPSEIEIRETRTLAS 1073
            YLS+CRI +VGFEASE+RKLV++VRRGGGSRYM FNEKLTHIVVG+PSE+E +  R LA+
Sbjct: 344  YLSDCRILLVGFEASEMRKLVNMVRRGGGSRYMSFNEKLTHIVVGTPSEVEKKVVRGLAA 403

Query: 1074 RGIIHVVKKEWLEDCDREKKEFPV 1145
             G+I VV+  WLEDCD EKKE  V
Sbjct: 404  TGVISVVRTIWLEDCDHEKKEVSV 427



 Score =  394 bits (1011), Expect = e-106
 Identities = 225/476 (47%), Positives = 286/476 (60%), Gaps = 17/476 (3%)
 Frame = +2

Query: 1325 PEIFVNKEIPIRATSNYIEQPTMSSLNGKGPLKVQP----SSGIEIDERKSSNVFKGRLF 1492
            PE+ VN +  +  T+   +Q +M S+N K     Q     S+ + + + K S VFKG+ F
Sbjct: 491  PEVNVNWDNFLEETARSAQQ-SMPSINDKYKKTQQKMEQYSNTLNVKDGKESRVFKGKQF 549

Query: 1493 RFSPSFPAARRGEIIQWINEGGGQIFGDCIDIDSDFTVECHG-VVPSDAGS---VYVSSH 1660
            RFS SFP  RR EI+QW+N+GGG +  D    +  F VECHG ++P    +    +VSSH
Sbjct: 550  RFSHSFPEDRRAEIVQWVNQGGGDVVDDWCKQNVHFVVECHGALLPKSVNASQTTHVSSH 609

Query: 1661 WVKSSLEDGRLLDVGSHILYSPLPCQIPFVSLEKFKICISQYNEKERSLLKNLCFVLGTK 1840
            W++S LEDG LLDV SHILYSPLPCQIP    EK + C+SQY EK+R LL+NLCFVLG K
Sbjct: 610  WIRSCLEDGCLLDVSSHILYSPLPCQIPLPGFEKLRFCVSQYEEKDRLLLRNLCFVLGAK 669

Query: 1841 FTEKLTKSVTHLLCKFASGPKYEASCKWGMQSVTAEWLYECIKQNKVIDPDPFHPKQATS 2020
            F EKLTK VTHLLCKF  GPKYEA+CKWG+++VT+EW+YECIKQN V+  D F PK+ T+
Sbjct: 670  FVEKLTKKVTHLLCKFTGGPKYEAACKWGIKAVTSEWIYECIKQNGVVYVDSFCPKEITA 729

Query: 2021 QEREAGLCTMSQYPTQAFQMTSGDNASQLPIQSEELKNVQNESHPRKVVGFEETVPPSSC 2200
             +R+AGLC MSQYPTQA QM S D  SQLP QS +L ++  +S   +   F E    SS 
Sbjct: 730  HDRQAGLCIMSQYPTQAAQMISADKGSQLPTQSHDLGDIPTQSICNRSDRFNEEARHSSV 789

Query: 2201 RKREASIAENPTSM---------LSSVSKQFDHGLTVLSTKNMEESAKVVSEFHDDVAAI 2353
              + A + E+ +           +  +SK    G T+  T   EE++ VV    D  AAI
Sbjct: 790  HAKRARLLEDESQKTVPPSGAQDMDFISKMNSSGTTI--TAVTEETSHVVP---DVAAAI 844

Query: 2354 EDLLEQTSTISDHMSTEISLFPFDGSLRGQASDCTIRDQATDFSIRGLDDVDPSSYTKVQ 2533
            EDLLEQTS I D  S                + C     ++D S  G D  D  S   + 
Sbjct: 845  EDLLEQTSKIHDLKSP-------------GRTGCEKHLFSSDCSPLGQDHADSHSSFDLS 891

Query: 2534 MDCINRPARNFDKINLPRTVATEAYDNFSETQTDSQIVGYAEDLSGRQMIIDRVRS 2701
               +NR  +  D  N P  V    YD FSETQT+SQ+VGY EDLSGRQMIIDRVR+
Sbjct: 892  KHWLNRIEKKDDICNPPGDVKASTYDGFSETQTESQVVGYEEDLSGRQMIIDRVRT 947


>ref|XP_002520311.1| topbp1, putative [Ricinus communis] gi|223540530|gb|EEF42097.1|
            topbp1, putative [Ricinus communis]
          Length = 950

 Score =  400 bits (1027), Expect = e-108
 Identities = 222/480 (46%), Positives = 297/480 (61%), Gaps = 10/480 (2%)
 Frame = +2

Query: 1292 GKPSAVSFSAE--PEIFVNKEIPIRATSNYIEQPTMSSLNG--KGPLKVQPSSGIEIDER 1459
            GK S++  S E  PEI++++ I + AT    +Q   S +N   K   K QP+S  +   +
Sbjct: 473  GKTSSLENSREEKPEIYMSRSISLEATVRQSQQNIFSIVNDEKKSGKKTQPNSSCQ--NQ 530

Query: 1460 KSSNVFKGRLFRFSPSFPAARRGEIIQWINEGGGQIFGDCIDIDSDFTVECHGVVPSDAG 1639
            K   VFKG++F FS SFPA RR EII+W+++GGG++  D    + +FT+ECHG +P   G
Sbjct: 531  KPLTVFKGKIFCFSNSFPADRRAEIIEWVSQGGGKMVEDHTKKNVNFTIECHGTIPRCMG 590

Query: 1640 ---SVYVSSHWVKSSLEDGRLLDVGSHILYSPLPCQIPFVSLEKFKICISQYNEKERSLL 1810
               + YVSSHWV+S LED  LLDVG HI+YSPLPCQIP    E F+ CISQY EK+R LL
Sbjct: 591  GSQTTYVSSHWVRSCLEDESLLDVGGHIIYSPLPCQIPLPGFENFRFCISQYEEKDRLLL 650

Query: 1811 KNLCFVLGTKFTEKLTKSVTHLLCKFASGPKYEASCKWGMQSVTAEWLYECIKQNKVIDP 1990
            +NLCFVLG KF EKLT+ VTHLLCKF +GPKYEA+CKWG+ S+T+EW+YEC++QN+V+  
Sbjct: 651  RNLCFVLGAKFVEKLTRKVTHLLCKFTNGPKYEAACKWGICSITSEWIYECVRQNEVVAL 710

Query: 1991 DPFHPKQATSQEREAGLCTMSQYPTQAFQMTSGDNASQLPIQSEELKNVQNESHPRKVVG 2170
            D F PK+ TSQ++EAGLCT+SQ+PTQA +M SG+N SQL  QS +L++   ++    +  
Sbjct: 711  DRFRPKEVTSQDQEAGLCTVSQFPTQAARMISGENPSQLISQSRDLRSAPTQTGSIGIFS 770

Query: 2171 FEETVPPSSCRKREASIAENPTSMLSSVSKQFDHGLTVLSTKNMEESAKVVSEFH---DD 2341
            F E    S+   ++A + ++     + +S   D  +  +++    +S       H   D 
Sbjct: 771  FGEDAQKSTKYSKKARLLKS-DDQEAQLSFHLDDPVYTINSTRGNDSKDTAGSSHGVPDV 829

Query: 2342 VAAIEDLLEQTSTISDHMSTEISLFPFDGSLRGQASDCTIRDQATDFSIRGLDDVDPSSY 2521
             AAIEDLLEQTS I D  S   S +    S+       TI        I G D     S 
Sbjct: 830  AAAIEDLLEQTSKIHDQKSLGKSEY----SMFASVESLTIEQLYPSDPILGEDHGGSHSV 885

Query: 2522 TKVQMDCINRPARNFDKINLPRTVATEAYDNFSETQTDSQIVGYAEDLSGRQMIIDRVRS 2701
              V    +NR  +  D  N  R V    YDNF+ETQT+SQ+V Y EDLSGRQMIIDRVR+
Sbjct: 886  IGVPNHWLNRTGKRDDLSNPSREVNRGVYDNFTETQTESQVVLYEEDLSGRQMIIDRVRT 945



 Score =  396 bits (1017), Expect = e-107
 Identities = 219/386 (56%), Positives = 263/386 (68%), Gaps = 5/386 (1%)
 Frame = +3

Query: 3    RPLPNQGFTCCLAMDGVKVIASGFDIDEKVEIGKLVAGMGGVLQVRSSADISFVIVKNVL 182
            R LP QGFTCCLAMDGVKV+ASGFDIDEKV+I KLV  MGG L  ++S D+SFVIVKNVL
Sbjct: 87   RTLPKQGFTCCLAMDGVKVLASGFDIDEKVKIEKLVTAMGGQLHTKTSLDVSFVIVKNVL 146

Query: 183  AAKYKLALNDLKKPIVTKDWVYQCWKEHRVVPQESYKVLPFSGLRICVSRIPAVERKEME 362
            AAKYK ALN LKKP+VT +W+YQCW EHRVVPQESY+VLPFSGL ICV+RIPA       
Sbjct: 147  AAKYKWALNILKKPVVTCNWLYQCWNEHRVVPQESYRVLPFSGLMICVTRIPA------- 199

Query: 363  KLILQNGGKYSAELTRKCTHLVCDAPEGDKYVVAKQWGHILIVTRKWFDQSLSRRVCLNE 542
                                       GDKY VA++WGHI IV RKWFDQS++RR CLNE
Sbjct: 200  ---------------------------GDKYKVAQRWGHIHIVMRKWFDQSVARRACLNE 232

Query: 543  ESYPVQSTPASSLSISRKKARHSQETSSGISQCAKPSAGMASSS--ELCGPTISQ-DPEV 713
            ESYPVQ   ASS+  S   A+H    S  +     PSA  A S+   L G  +S  D E 
Sbjct: 233  ESYPVQGGSASSIKKSSSMAQHIIGNSISV-----PSAAPAESNLPGLPGAGVSDLDLEP 287

Query: 714  TVSHNIFTVVSE--VSMFNNDGEXXXXXXXXXXXXXNASEPNVDIPLNNCIANDSQTEDN 887
            T+S N+ ++ S+  VS+   D E              A  P  +  L+ C+ANDSQ+ED+
Sbjct: 288  TLSQNMSSMFSDPPVSVKEWDNEVP------------AVHPTNETNLDGCVANDSQSEDS 335

Query: 888  DLYLSECRITIVGFEASELRKLVSIVRRGGGSRYMHFNEKLTHIVVGSPSEIEIRETRTL 1067
            DLYLSECRI++VGFEASELRKLV++VRRGGGSRY+ FN+KLTHIVVG+P+E+E +E R L
Sbjct: 336  DLYLSECRISLVGFEASELRKLVNMVRRGGGSRYLSFNDKLTHIVVGAPTEVEKKELRGL 395

Query: 1068 ASRGIIHVVKKEWLEDCDREKKEFPV 1145
            A+ G+I VV+  WLEDCDR+KKE PV
Sbjct: 396  AALGVIDVVRPTWLEDCDRQKKEVPV 421