BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000792
         (1350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putativ...   435   e-119
emb|CBI22501.3| unnamed protein product [Vitis vinifera]              431   e-118
ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mi...   431   e-118
ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arab...   422   e-115
ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mi...   419   e-115

>ref|XP_002513405.1| Ribosomal RNA assembly protein mis3, putative [Ricinus communis]
            gi|223547313|gb|EEF48808.1| Ribosomal RNA assembly
            protein mis3, putative [Ricinus communis]
          Length = 377

 Score =  435 bits (1118), Expect = e-119
 Identities = 223/364 (61%), Positives = 261/364 (71%)
 Frame = -3

Query: 1348 FDPSWNPDGLLETTTFSTLFPAYREKYLQECWPIVKGALKEHGITCELNLVEGSMTVSTT 1169
            FDPSWN  G+LE ++FSTLFP YREKYLQE WP+VK A+KE+G+ CELNLVEGSMTVSTT
Sbjct: 35   FDPSWNEGGMLEVSSFSTLFPQYREKYLQEVWPMVKSAIKEYGVACELNLVEGSMTVSTT 94

Query: 1168 RKTRDPYIVVKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKVGGLVRNKERFVKRRQHL 989
            RKTRDPYI+VKARDLIKLLSRSVPAPQAIKIL+DEMQCDIIK+G LVR KERFVKRRQHL
Sbjct: 95   RKTRDPYIIVKARDLIKLLSRSVPAPQAIKILHDEMQCDIIKIGNLVRKKERFVKRRQHL 154

Query: 988  VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIVEDCITNKMHPLYHIKILM 809
            VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIVEDCI NK+HP+YHIKILM
Sbjct: 155  VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIVEDCIQNKLHPVYHIKILM 214

Query: 808  LRRELAKDPTLANENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDLQLESG 629
            +++EL KDP L NENWDRFLP F                            K+D +LESG
Sbjct: 215  MKKELEKDPALQNENWDRFLPKFKKKNVKHNKVKRKEKKPYTPFPPEQQPSKVDRELESG 274

Query: 628  EYFASDQKKQAKKWLEKQDKQLEKTAENKKKREEAFIPPAXXXXXXXXXXXXXXXXXXXX 449
            EYF ++QKKQAKKW EKQ++Q EKTAENK+KR+ AF+PP                     
Sbjct: 275  EYFLNNQKKQAKKWQEKQERQAEKTAENKRKRDTAFVPP--------------------- 313

Query: 448  XXXEPSRHDSTAQTEGNKDDINAVAMSLMXXXXXXXXXXXXXXXNADDYIASAEKTAKRK 269
               E  R     ++E   +D+ A+A+S+                NA++YIA++ +  K+K
Sbjct: 314  ---EEHRDQDAGKSEDKNNDVAAIALSIKKKAKDFGKKNAVENINAEEYIAASGELPKKK 370

Query: 268  SRKS 257
              K+
Sbjct: 371  KIKA 374


>emb|CBI22501.3| unnamed protein product [Vitis vinifera]
          Length = 424

 Score =  431 bits (1107), Expect = e-118
 Identities = 227/363 (62%), Positives = 256/363 (70%)
 Frame = -3

Query: 1348 FDPSWNPDGLLETTTFSTLFPAYREKYLQECWPIVKGALKEHGITCELNLVEGSMTVSTT 1169
            FDPSWN  G+LE ++FSTLFP YREKYLQE WP V+GALKE G+  ELNLVEG MTVSTT
Sbjct: 79   FDPSWNEGGMLEVSSFSTLFPQYREKYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTT 138

Query: 1168 RKTRDPYIVVKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKVGGLVRNKERFVKRRQHL 989
            RKTRDPYI++KARDLIKLLSRSVPAPQAIKILNDEMQCDIIK+G LVRNKERFVKRRQHL
Sbjct: 139  RKTRDPYIIMKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHL 198

Query: 988  VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIVEDCITNKMHPLYHIKILM 809
            VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR++VEDCI NKMHP+YHIK LM
Sbjct: 199  VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIKTLM 258

Query: 808  LRRELAKDPTLANENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDLQLESG 629
            ++RELA DP L NENWDRFLP F                            K+DLQLESG
Sbjct: 259  MKRELASDPALENENWDRFLPKFKKKNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQLESG 318

Query: 628  EYFASDQKKQAKKWLEKQDKQLEKTAENKKKREEAFIPPAXXXXXXXXXXXXXXXXXXXX 449
            EYF SDQKK AKKW +K +KQ EKTAENK+KRE AF+PP                     
Sbjct: 319  EYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPP--------------------- 357

Query: 448  XXXEPSRHDSTAQTEGNKDDINAVAMSLMXXXXXXXXXXXXXXXNADDYIASAEKTAKRK 269
               EP   D +   + +K+D+ A+AMSL                N + YIA++ +   +K
Sbjct: 358  --MEPMVQDPSKSAD-DKNDVAAMAMSLKKKAKEFGKQKSLENVNPETYIAASGEAPSKK 414

Query: 268  SRK 260
             RK
Sbjct: 415  KRK 417


>ref|XP_002271394.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Vitis vinifera]
          Length = 386

 Score =  431 bits (1107), Expect = e-118
 Identities = 227/363 (62%), Positives = 256/363 (70%)
 Frame = -3

Query: 1348 FDPSWNPDGLLETTTFSTLFPAYREKYLQECWPIVKGALKEHGITCELNLVEGSMTVSTT 1169
            FDPSWN  G+LE ++FSTLFP YREKYLQE WP V+GALKE G+  ELNLVEG MTVSTT
Sbjct: 41   FDPSWNEGGMLEVSSFSTLFPQYREKYLQEAWPTVRGALKEFGVKSELNLVEGCMTVSTT 100

Query: 1168 RKTRDPYIVVKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKVGGLVRNKERFVKRRQHL 989
            RKTRDPYI++KARDLIKLLSRSVPAPQAIKILNDEMQCDIIK+G LVRNKERFVKRRQHL
Sbjct: 101  RKTRDPYIIMKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKIGSLVRNKERFVKRRQHL 160

Query: 988  VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIVEDCITNKMHPLYHIKILM 809
            VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR++VEDCI NKMHP+YHIK LM
Sbjct: 161  VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRVVEDCIQNKMHPVYHIKTLM 220

Query: 808  LRRELAKDPTLANENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDLQLESG 629
            ++RELA DP L NENWDRFLP F                            K+DLQLESG
Sbjct: 221  MKRELASDPALENENWDRFLPKFKKKNVKQKKVKSKEKKPYTPFPPPQPPSKVDLQLESG 280

Query: 628  EYFASDQKKQAKKWLEKQDKQLEKTAENKKKREEAFIPPAXXXXXXXXXXXXXXXXXXXX 449
            EYF SDQKK AKKW +K +KQ EKTAENK+KRE AF+PP                     
Sbjct: 281  EYFLSDQKKFAKKWQQKLEKQAEKTAENKRKREAAFVPP--------------------- 319

Query: 448  XXXEPSRHDSTAQTEGNKDDINAVAMSLMXXXXXXXXXXXXXXXNADDYIASAEKTAKRK 269
               EP   D +   + +K+D+ A+AMSL                N + YIA++ +   +K
Sbjct: 320  --MEPMVQDPSKSAD-DKNDVAAMAMSLKKKAKEFGKQKSLENVNPETYIAASGEAPSKK 376

Query: 268  SRK 260
             RK
Sbjct: 377  KRK 379


>ref|XP_002871325.1| hypothetical protein ARALYDRAFT_487679 [Arabidopsis lyrata subsp.
            lyrata] gi|297317162|gb|EFH47584.1| hypothetical protein
            ARALYDRAFT_487679 [Arabidopsis lyrata subsp. lyrata]
          Length = 391

 Score =  422 bits (1084), Expect = e-115
 Identities = 224/369 (60%), Positives = 262/369 (71%), Gaps = 5/369 (1%)
 Frame = -3

Query: 1348 FDPSWNPDGLLETTTFSTLFPAYREKYLQECWPIVKGALKEHGITCELNLVEGSMTVSTT 1169
            FDP+WNP G+LET++FSTLFP YREKYLQE WP V+ ALKE+G+ C+LNLVEGSMTVSTT
Sbjct: 44   FDPAWNPTGMLETSSFSTLFPQYREKYLQESWPRVESALKEYGVACKLNLVEGSMTVSTT 103

Query: 1168 RKTRDPYIVVKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKVGGLVRNKERFVKRRQHL 989
            RKTRDPYI+VKARDLIKLLSRSVPAPQAIKIL DEMQCDIIK+G LVRNK+RFVKRRQ L
Sbjct: 104  RKTRDPYIIVKARDLIKLLSRSVPAPQAIKILEDEMQCDIIKIGSLVRNKQRFVKRRQRL 163

Query: 988  VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIVEDCITNKMHPLYHIKILM 809
            VGPNSSTLKALEILT CYILVQG+TVAAMG FKGLKQ+R+IVEDC+ NKMHP+YHIK LM
Sbjct: 164  VGPNSSTLKALEILTNCYILVQGSTVAAMGPFKGLKQLRRIVEDCVQNKMHPVYHIKTLM 223

Query: 808  LRRELAKDPTLANENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDLQLESG 629
            +++EL KDP LANE+WDRFLPTF                            KID+QLESG
Sbjct: 224  MKKELEKDPALANESWDRFLPTFRKKNVKQKKPKSKEKKPYTPFPPPQPPSKIDMQLESG 283

Query: 628  EYFASDQKKQAKKWLEKQDKQLEKTAENKKKREEAFIPPAXXXXXXXXXXXXXXXXXXXX 449
            EYF SD+KK  KKWLEKQ+KQ EK+ ENK+KR+ +F+PP                     
Sbjct: 284  EYFMSDKKKSEKKWLEKQEKQTEKSTENKRKRDASFLPP--------------------- 322

Query: 448  XXXEPSRHDSTA-QTEGNKDDINAVAMSL-MXXXXXXXXXXXXXXXNADDYIA---SAEK 284
               EP  ++S A  +E  K+DI  +  SL                 NA++YIA   S +K
Sbjct: 323  --EEPMNNNSKANNSEDGKNDITELTQSLKSKTKELKKQKKTHERVNAEEYIAGPSSIDK 380

Query: 283  TAKRKSRKS 257
             AK KS+K+
Sbjct: 381  PAKEKSKKN 389


>ref|XP_003519473.1| PREDICTED: ribosomal RNA assembly protein mis3-like [Glycine max]
          Length = 389

 Score =  419 bits (1078), Expect = e-115
 Identities = 205/279 (73%), Positives = 232/279 (83%)
 Frame = -3

Query: 1348 FDPSWNPDGLLETTTFSTLFPAYREKYLQECWPIVKGALKEHGITCELNLVEGSMTVSTT 1169
            FDPSWN  G+LE ++FSTLFP YREKYLQE WP+VK ALKE G+ CELNLVEGSMTVSTT
Sbjct: 48   FDPSWNDGGMLEVSSFSTLFPQYREKYLQEAWPMVKSALKEFGVACELNLVEGSMTVSTT 107

Query: 1168 RKTRDPYIVVKARDLIKLLSRSVPAPQAIKILNDEMQCDIIKVGGLVRNKERFVKRRQHL 989
            RKTRDPYI++KARDLIKLLSRS+PAPQAIKIL+DEMQCDIIK+ G+VRNKERFVKRRQHL
Sbjct: 108  RKTRDPYIIIKARDLIKLLSRSLPAPQAIKILDDEMQCDIIKISGMVRNKERFVKRRQHL 167

Query: 988  VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRKIVEDCITNKMHPLYHIKILM 809
            VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVR+IVE+C+ NKMHP+Y+IK+LM
Sbjct: 168  VGPNSSTLKALEILTGCYILVQGNTVAAMGSFKGLKQVRRIVEECMLNKMHPVYNIKVLM 227

Query: 808  LRRELAKDPTLANENWDRFLPTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXKIDLQLESG 629
            +++EL KDP LA ENWDRFLP F                            KID+QLE+G
Sbjct: 228  MKKELEKDPALAQENWDRFLPKFKKKNVKQKKVNTKQKKPYTPFPPPQQPSKIDIQLETG 287

Query: 628  EYFASDQKKQAKKWLEKQDKQLEKTAENKKKREEAFIPP 512
            EYF S+++K AK W EKQ+KQ EKTAENK+KREEAFIPP
Sbjct: 288  EYFLSNKRKSAKIWQEKQEKQAEKTAENKRKREEAFIPP 326