BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000754
         (1557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]       452   e-124
sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding prot...   448   e-123
gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]           444   e-122
ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] g...   441   e-121
gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]           433   e-119

>gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
          Length = 482

 Score =  452 bits (1163), Expect = e-124
 Identities = 220/320 (68%), Positives = 263/320 (82%), Gaps = 12/320 (3%)
 Frame = -2

Query: 1151 QILTVKIIRNRQTFQSERYGFIEFSSHATAEKVLQGYNGTTMPDTDQNFRLNWASFSTGD 972
            ++++VKIIRN+QT QSERYGF+EF++HA AEKVLQ YNGT MP+ +Q FRLNWA FSTG+
Sbjct: 163  EVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGE 222

Query: 971  RRVDSSYDLSIFVGDLAPDVTDALLLETFASKYPSVKGAKVVVDTNTGRSKGYGFVRFSD 792
            +R ++  D SIFVGDLA DVTD +L +TFAS+YPS+KGAKVVVD NTG SKGYGFVRF D
Sbjct: 223  KRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGD 282

Query: 791  ENEKSRAVTEMNGVLCSNRAMRVGVATPKKPMTQQQFGSQAVILSGRYVPNGALPQGAQS 612
            E+E+SRA+TEMNGV CS+RAMR+GVATPKKP  QQQ+ SQAVILSG Y  NGA   G+QS
Sbjct: 283  ESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQS 342

Query: 611  DGDLSNTTIFVGGLDTVVTDEELRQSFIEFGEIISVKIPAGKGCGFVQFADRSNAEDAIE 432
            DGD SNTTIFVGGLD+ VTDEELRQSF +FGE++SVKIPAGKGCGFVQF+DRS+A++AI+
Sbjct: 343  DGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQ 402

Query: 431  KLNGTVIGKQTVRLSWGRTPGNK--------QWNGAYYGRQGHGGY----SHNQNPSMFP 288
            KL+G +IGKQ VRLSWGR+P NK        QWNG Y GRQ +GGY    S NQ+  M+ 
Sbjct: 403  KLSGAIIGKQAVRLSWGRSPANKQMRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYA 462

Query: 287  AAASNGAQSNGYGSYQQTVS 228
              A+ GA SNGYG++QQ VS
Sbjct: 463  TGAAYGASSNGYGNHQQPVS 482


>sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
            Short=Poly(A)-binding protein RBP47; AltName:
            Full=RNA-binding protein 47; Short=NplRBP47
            gi|9663769|emb|CAC01238.1| RNA Binding Protein 47
            [Nicotiana plumbaginifolia]
          Length = 428

 Score =  448 bits (1152), Expect = e-123
 Identities = 218/320 (68%), Positives = 262/320 (81%), Gaps = 12/320 (3%)
 Frame = -2

Query: 1151 QILTVKIIRNRQTFQSERYGFIEFSSHATAEKVLQGYNGTTMPDTDQNFRLNWASFSTGD 972
            ++++VKIIRN+QT QSERYGF+EF++HA AEKVLQ YNGT MP+T+Q FRLNWA FSTG+
Sbjct: 109  EVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGE 168

Query: 971  RRVDSSYDLSIFVGDLAPDVTDALLLETFASKYPSVKGAKVVVDTNTGRSKGYGFVRFSD 792
            +R ++  D SIFVGDLA DVTD +L +TFAS+YPS+KGAKVVVD NTG SKGYGFVRF D
Sbjct: 169  KRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGD 228

Query: 791  ENEKSRAVTEMNGVLCSNRAMRVGVATPKKPMTQQQFGSQAVILSGRYVPNGALPQGAQS 612
            E+E+SRA+TEMNGV CS+RAMR+GVATPKKP   +Q+ SQAVILSG Y  NGA   G+QS
Sbjct: 229  ESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQS 288

Query: 611  DGDLSNTTIFVGGLDTVVTDEELRQSFIEFGEIISVKIPAGKGCGFVQFADRSNAEDAIE 432
            DGD SNTTIFVGGLD+ VTDEELRQSF +FGE++SVKIPAGKGCGFVQF+DRS+A++AI+
Sbjct: 289  DGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQ 348

Query: 431  KLNGTVIGKQTVRLSWGRTPGNK--------QWNGAYYGRQGHGGY----SHNQNPSMFP 288
            KL+G +IGKQ VRLSWGR+P NK        QWNG Y GRQ +GGY    S NQ+  M+ 
Sbjct: 349  KLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYA 408

Query: 287  AAASNGAQSNGYGSYQQTVS 228
              A+ GA SN YG++QQ VS
Sbjct: 409  TGAAYGASSNRYGNHQQPVS 428



 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 74/292 (25%), Positives = 121/292 (41%), Gaps = 11/292 (3%)
 Frame = -2

Query: 1088 IEFSSHATAEKVLQGYNGTTMPDTDQNFRLNWASFSTGDRRVDSSYDLSIFVGDLAPDVT 909
            +++ + A A +    Y    MP   Q+ +      S    +  S  + +I++GDL   + 
Sbjct: 37   MQYPAAAMAMQQQMMYGQQYMPYYQQHQQQQKMQQSPTQIQSSSEDNKTIWIGDLQQWMD 96

Query: 908  DALLLETFASKYPSVKGAKVVVDTNTGRSKGYGFVRFSDENEKSRAVTEMNGVLCSNRAM 729
            ++ L   F S+   V   K++ +  TG+S+ YGFV F+      + +   NG +      
Sbjct: 97   ESYLHSCF-SQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTM------ 149

Query: 728  RVGVATPKKPMTQQQFG-SQAVILSGRYVPNGALPQGAQSDGDLSNTTIFVGGLDTVVTD 552
                     P T+Q F  + A   +G         + A++  D S   IFVG L + VTD
Sbjct: 150  --------MPNTEQPFRLNWAGFSTGE--------KRAETGSDFS---IFVGDLASDVTD 190

Query: 551  EELRQSFIE-------FGEIISVKIPAGKGCGFVQFADRSNAEDAIEKLNGTVIGKQTVR 393
              LR +F            ++       KG GFV+F D S    A+ ++NG     + +R
Sbjct: 191  TMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMR 250

Query: 392  LSWGRTPGNKQWNGAYYGRQG---HGGYSHNQNPSMFPAAASNGAQSNGYGS 246
            +  G     K      Y  Q     GGY+ N        AA++G+QS+G  S
Sbjct: 251  I--GVATPKKPSAHEQYSSQAVILSGGYASN-------GAATHGSQSDGDSS 293


>gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
          Length = 428

 Score =  444 bits (1142), Expect = e-122
 Identities = 219/320 (68%), Positives = 262/320 (81%), Gaps = 12/320 (3%)
 Frame = -2

Query: 1151 QILTVKIIRNRQTFQSERYGFIEFSSHATAEKVLQGYNGTTMPDTDQNFRLNWASFSTGD 972
            ++++VKIIRN+QT QSERYGF+EF++HA AEKVLQ YNGT MP+ +Q FRLNWA FSTG+
Sbjct: 109  EVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNAEQPFRLNWAGFSTGE 168

Query: 971  RRVDSSYDLSIFVGDLAPDVTDALLLETFASKYPSVKGAKVVVDTNTGRSKGYGFVRFSD 792
            +R ++  D SIFVGDLA DVTD +L +TFAS+YPS+KGAKVVVD NTG SKGYGFVRF D
Sbjct: 169  KRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGD 228

Query: 791  ENEKSRAVTEMNGVLCSNRAMRVGVATPKKPMTQQQFGSQAVILSGRYVPNGALPQGAQS 612
            E+E+SRA+TEMNGV CS+RAMR+GVATPKKP  QQQ+ SQAVILSG Y  NGA   G+QS
Sbjct: 229  ESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQS 288

Query: 611  DGDLSNTTIFVGGLDTVVTDEELRQSFIEFGEIISVKIPAGKGCGFVQFADRSNAEDAIE 432
            DGD SNTTIFVGGLD+ VTDEELRQSF +FGE++SVKIPAGKGCGFVQF+DRS+A++AI+
Sbjct: 289  DGDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQ 348

Query: 431  KLNGTVIGKQTVRLSWGRTPGNK-------QWNGAYYGRQGHGGY----SHNQNPSMF-P 288
            KL+G +IGKQ VRLSWGRT   +       QWNG Y GRQ +GGY    S NQ+  M+  
Sbjct: 349  KLSGAIIGKQAVRLSWGRTANKQMRADSGSQWNGGYNGRQNYGGYGYGASQNQDSGMYAT 408

Query: 287  AAASNGAQSNGYGSYQQTVS 228
             AA+ GA SNGYG++QQ VS
Sbjct: 409  GAAAYGASSNGYGNHQQPVS 428


>ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum] gi|40804404|gb|AAR91698.1|
            DNA-binding protein [Solanum lycopersicum]
          Length = 428

 Score =  441 bits (1134), Expect = e-121
 Identities = 216/325 (66%), Positives = 264/325 (81%), Gaps = 17/325 (5%)
 Frame = -2

Query: 1151 QILTVKIIRNRQTFQSERYGFIEFSSHATAEKVLQGYNGTTMPDTDQNFRLNWASFSTGD 972
            ++++VK+IRN+QT QSERYGFIEF++H  AEKVLQ YNGT MP+ +Q FRLNW++FS+G+
Sbjct: 104  EVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQSYNGTMMPNAEQPFRLNWSAFSSGE 163

Query: 971  RRVD------SSYDLSIFVGDLAPDVTDALLLETFASKYPSVKGAKVVVDTNTGRSKGYG 810
            +R D      S  DLSIFVGDLA DVTD +L +TF+S+YPSVKGAKVV+D+NTGRSKGYG
Sbjct: 164  KRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYG 223

Query: 809  FVRFSDENEKSRAVTEMNGVLCSNRAMRVGVATPKKPMTQQQFGSQAVILSGRYVPNGAL 630
            FVRF DE+E+SRA+TEMNG+ CS+RAMR+GVATPKKP   QQ+  QAVIL+G +  NGA 
Sbjct: 224  FVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKKPSPMQQYFPQAVILAGGHASNGAA 283

Query: 629  PQGAQSDGDLSNTTIFVGGLDTVVTDEELRQSFIEFGEIISVKIPAGKGCGFVQFADRSN 450
             Q +Q+D DLSNTT+FVGGLD+ VTDEELRQSF +FG ++SVKIPAGKGCGFVQF++RS 
Sbjct: 284  TQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSA 343

Query: 449  AEDAIEKLNGTVIGKQTVRLSWGRTPGNK--------QWNGAYYGRQGHGGYSH---NQN 303
            AEDAIEKLNGTVIG QTVRLSWGR P NK        QWNG YYGRQ +GGY +      
Sbjct: 344  AEDAIEKLNGTVIGAQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQ 403

Query: 302  PSMFPAAASNGAQSNGYGSYQQTVS 228
             SM+ A A++GA SNGYG+++Q+VS
Sbjct: 404  DSMYGAGAAHGASSNGYGNHEQSVS 428



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 54/193 (27%), Positives = 82/193 (42%), Gaps = 8/193 (4%)
 Frame = -2

Query: 944 SIFVGDLAPDVTDALLLETFASKYPSVKGAKVVVDTNTGRSKGYGFVRFSDENEKSRAVT 765
           +I++GDL   + +  L   FA     V   KV+ +  TG+S+ YGF+ F+      + + 
Sbjct: 80  TIWIGDLQQWMDEGYLHTCFAQA-GEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138

Query: 764 EMNGVLCSNRAMRVGVATPKKPMTQQQFG-SQAVILSGRYVPNGALPQGAQSDGDLSNTT 588
             NG +               P  +Q F  + +   SG       +  GA S  DLS   
Sbjct: 139 SYNGTM--------------MPNAEQPFRLNWSAFSSGE--KRADVGAGAGSGSDLS--- 179

Query: 587 IFVGGLDTVVTDEELRQSFIE-------FGEIISVKIPAGKGCGFVQFADRSNAEDAIEK 429
           IFVG L + VTD  LR +F            +I       KG GFV+F D S    A+ +
Sbjct: 180 IFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTE 239

Query: 428 LNGTVIGKQTVRL 390
           +NG     + +R+
Sbjct: 240 MNGIYCSSRAMRI 252


>gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
          Length = 423

 Score =  433 bits (1113), Expect = e-119
 Identities = 214/325 (65%), Positives = 260/325 (80%), Gaps = 17/325 (5%)
 Frame = -2

Query: 1151 QILTVKIIRNRQTFQSERYGFIEFSSHATAEKVLQGYNGTTMPDTDQNFRLNWASFSTGD 972
            ++++VK+IRN+QT QSERYGFIEF++H  AEKVLQ YNGT MP+ +Q FRLNW++FSTG+
Sbjct: 104  EVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQSYNGTMMPNAEQPFRLNWSAFSTGE 163

Query: 971  RRVD------SSYDLSIFVGDLAPDVTDALLLETFASKYPSVKGAKVVVDTNTGRSKGYG 810
            +R D      S  DLSIFVGDLA DVTD +L +TF+S+YPSVKGAKVV+D+NTGRSKGYG
Sbjct: 164  KRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYG 223

Query: 809  FVRFSDENEKSRAVTEMNGVLCSNRAMRVGVATPKKPMTQQQFGSQAVILSGRYVPNGAL 630
            FVRF DE+E+SRA+TEMNG+ CS+RAMR+GVATPKKP   QQ+ SQ     G +  NGA 
Sbjct: 224  FVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPKKPSAMQQYSSQ-----GGHASNGAA 278

Query: 629  PQGAQSDGDLSNTTIFVGGLDTVVTDEELRQSFIEFGEIISVKIPAGKGCGFVQFADRSN 450
             Q +Q+D DLSNTT+FVGGLD+ VTDEELRQSF +FG ++SVKIPAGKGCGFVQF++RS 
Sbjct: 279  TQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSERSA 338

Query: 449  AEDAIEKLNGTVIGKQTVRLSWGRTPGNK--------QWNGAYYGRQGHGGYSH---NQN 303
            AEDAIEKLNGTVIG QTVRLSWGR P NK        QWNG YYGRQ +GGY +      
Sbjct: 339  AEDAIEKLNGTVIGTQTVRLSWGRNPANKQFRTDSGSQWNGGYYGRQNYGGYGYGASQSQ 398

Query: 302  PSMFPAAASNGAQSNGYGSYQQTVS 228
             SM+ A A++GA SNGYG+++Q+VS
Sbjct: 399  DSMYGAGAAHGASSNGYGNHEQSVS 423



 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 61/231 (26%), Positives = 91/231 (39%), Gaps = 7/231 (3%)
 Frame = -2

Query: 944 SIFVGDLAPDVTDALLLETFASKYPSVKGAKVVVDTNTGRSKGYGFVRFSDENEKSRAVT 765
           +I++GDL   + +  L   FA     V   KV+ +  TG+S+ YGF+ F+      + + 
Sbjct: 80  TIWIGDLQQWMDEGYLHTCFAQA-GEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138

Query: 764 EMNGVLCSNRAMRVGVATPKKPMTQQQFGSQAVILSGRYVPNGALPQGAQSDGDLSNTTI 585
             NG +  N          ++P    +    A     +    GA    A S  DLS   I
Sbjct: 139 SYNGTMMPN---------AEQPF---RLNWSAFSTGEKRADVGA---AAGSGSDLS---I 180

Query: 584 FVGGLDTVVTDEELRQSFIE-------FGEIISVKIPAGKGCGFVQFADRSNAEDAIEKL 426
           FVG L + VTD  LR +F            +I       KG GFV+F D S    A+ ++
Sbjct: 181 FVGDLASDVTDTMLRDTFSSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEM 240

Query: 425 NGTVIGKQTVRLSWGRTPGNKQWNGAYYGRQGHGGYSHNQNPSMFPAAASN 273
           NG     + +R+    TP        Y  + GH         S   +  SN
Sbjct: 241 NGIYCSSRAMRIGVA-TPKKPSAMQQYSSQGGHASNGAATQTSQTDSDLSN 290