BLASTX nr result

ID: Lithospermum22_contig00000720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000720
         (823 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa polyp...   177   2e-42
emb|CAA27989.1| unnamed protein product [Solanum tuberosum]           174   2e-41
ref|NP_001236219.1| uncharacterized protein LOC100305752 [Glycin...   174   2e-41
gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]   174   2e-41
ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloropla...   174   3e-41

>sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa polypeptide, chloroplastic;
           AltName: Full=Light-inducible tissue-specific ST-LS1
           protein; Flags: Precursor gi|21489|emb|CAA28450.1|
           ST-LS1 protein [Solanum tuberosum]
           gi|413968448|gb|AFW90561.1| light inducible
           tissue-specific ST-LS1 [Solanum tuberosum]
           gi|413968538|gb|AFW90606.1| light inducible
           tissue-specific ST-LS1 [Solanum tuberosum]
           gi|418730663|gb|AFX66996.1| photosystem II 10 kDa
           polypeptide [Solanum tuberosum]
          Length = 138

 Score =  177 bits (450), Expect = 2e-42
 Identities = 96/142 (67%), Positives = 112/142 (78%), Gaps = 1/142 (0%)
 Frame = -1

Query: 631 MATTVMSTLILKPSSLLPADKTAVVRGGLPSLARTSTSFRVVASG-KKIKTDKPYGINGG 455
           MA+TVMS+L LKP+  L  +KT+V   GLPSLAR+S+SF+VVASG KK+KTDKPYGING 
Sbjct: 1   MASTVMSSLSLKPTFTL--EKTSVK--GLPSLARSSSSFKVVASGVKKLKTDKPYGINGS 56

Query: 454 MDLKDGVDASGRRAKGKGVYQFVDKYGANVDGYSPIYNTEDWSPSGDVYVGGTTXXXXXX 275
           M L+DGVDASGR+ KGKGVYQ+VDKYGANVDGYSPIYNT++WSPSGDVYVGGTT      
Sbjct: 57  MALRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWA 116

Query: 274 XXXXXXXXXXXXLVYSTSALSQ 209
                       LVY+TSAL+Q
Sbjct: 117 VTLVGILAGGALLVYNTSALAQ 138


>emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
          Length = 138

 Score =  174 bits (442), Expect = 2e-41
 Identities = 94/142 (66%), Positives = 111/142 (78%), Gaps = 1/142 (0%)
 Frame = -1

Query: 631 MATTVMSTLILKPSSLLPADKTAVVRGGLPSLARTSTSFRVVASG-KKIKTDKPYGINGG 455
           MA+TVMS+L LKP+  L  +KT+V   GLPSLAR+S+ F+VVASG KK+KTDKPYGING 
Sbjct: 1   MASTVMSSLSLKPTFTL--EKTSVK--GLPSLARSSSPFKVVASGVKKLKTDKPYGINGS 56

Query: 454 MDLKDGVDASGRRAKGKGVYQFVDKYGANVDGYSPIYNTEDWSPSGDVYVGGTTXXXXXX 275
           M L+DG+DASGR+ KGKGVYQ+VDKYGANVDGYSPIYNT++WSPSGDVYVGGTT      
Sbjct: 57  MALRDGLDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWA 116

Query: 274 XXXXXXXXXXXXLVYSTSALSQ 209
                       LVY+TSAL+Q
Sbjct: 117 VTLVGILAGGALLVYNTSALAQ 138


>ref|NP_001236219.1| uncharacterized protein LOC100305752 [Glycine max]
           gi|255626523|gb|ACU13606.1| unknown [Glycine max]
          Length = 138

 Score =  174 bits (442), Expect = 2e-41
 Identities = 91/141 (64%), Positives = 108/141 (76%)
 Frame = -1

Query: 631 MATTVMSTLILKPSSLLPADKTAVVRGGLPSLARTSTSFRVVASGKKIKTDKPYGINGGM 452
           MA++VM+++ LKP+     +K++V   GLPSL+R S+SFRVVASGKKIKTDKPYGINGGM
Sbjct: 1   MASSVMASVALKPAPFT-VEKSSV--RGLPSLSRNSSSFRVVASGKKIKTDKPYGINGGM 57

Query: 451 DLKDGVDASGRRAKGKGVYQFVDKYGANVDGYSPIYNTEDWSPSGDVYVGGTTXXXXXXX 272
            L+DG DASGR+ KGKGVYQFVDKYGANVDGYSPIY+T+DWSP+GDVY GGTT       
Sbjct: 58  ALRDGTDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAV 117

Query: 271 XXXXXXXXXXXLVYSTSALSQ 209
                      LVY+TSAL Q
Sbjct: 118 TLLGLLAGGALLVYNTSALVQ 138


>gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]
          Length = 139

 Score =  174 bits (441), Expect = 2e-41
 Identities = 93/142 (65%), Positives = 111/142 (78%), Gaps = 1/142 (0%)
 Frame = -1

Query: 631 MATTVMSTLILKPSSLLPADKTAVVRGGLPSLARTSTSFRVVASG-KKIKTDKPYGINGG 455
           MA++VM+++ LKP+     +K+AV   GLPSL+R+S+SF+VVASG KKIKTDKPYGINGG
Sbjct: 1   MASSVMASVSLKPAPFT-VEKSAV--RGLPSLSRSSSSFKVVASGGKKIKTDKPYGINGG 57

Query: 454 MDLKDGVDASGRRAKGKGVYQFVDKYGANVDGYSPIYNTEDWSPSGDVYVGGTTXXXXXX 275
           M+L +GVD+SGR+ KGKGVYQFVDKYG NVDGYSPIYNTEDWSPSGDVYVGGTT      
Sbjct: 58  MNLVEGVDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVGGTTGLAIWA 117

Query: 274 XXXXXXXXXXXXLVYSTSALSQ 209
                       LVY+TSAL+Q
Sbjct: 118 VTLAGLLAGGALLVYNTSALAQ 139


>ref|NP_001234042.1| photosystem II 10 kDa polypeptide, chloroplastic [Solanum
           lycopersicum] gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName:
           Full=Photosystem II 10 kDa polypeptide, chloroplastic;
           Flags: Precursor gi|1217642|emb|CAA65231.1| PSII
           polypeptide [Solanum lycopersicum]
          Length = 138

 Score =  174 bits (440), Expect = 3e-41
 Identities = 94/142 (66%), Positives = 110/142 (77%), Gaps = 1/142 (0%)
 Frame = -1

Query: 631 MATTVMSTLILKPSSLLPADKTAVVRGGLPSLARTSTSFRVVASG-KKIKTDKPYGINGG 455
           MA+TVMS+L LKP+  L  +K +V   GLPSL R+S+SF+VVASG KK+KTDKPYGING 
Sbjct: 1   MASTVMSSLSLKPTFTL--EKISVK--GLPSLTRSSSSFKVVASGVKKLKTDKPYGINGS 56

Query: 454 MDLKDGVDASGRRAKGKGVYQFVDKYGANVDGYSPIYNTEDWSPSGDVYVGGTTXXXXXX 275
           M L+DGVDASGR+ KGKGVYQ+VDKYGANVDGYSPIYNT++WSPSGDVYVGGTT      
Sbjct: 57  MALRDGVDASGRKPKGKGVYQYVDKYGANVDGYSPIYNTDEWSPSGDVYVGGTTGLAIWA 116

Query: 274 XXXXXXXXXXXXLVYSTSALSQ 209
                       LVY+TSAL+Q
Sbjct: 117 VTLLGILAGGALLVYNTSALAQ 138


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