BLASTX nr result

ID: Lithospermum22_contig00000696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000696
         (921 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum ly...   394   e-107
emb|CBI21000.3| unnamed protein product [Vitis vinifera]              391   e-106
ref|XP_002284967.1| PREDICTED: GTP-binding nuclear protein Ran-3...   391   e-106
emb|CBI28152.3| unnamed protein product [Vitis vinifera]              391   e-106
gb|AFK34827.1| unknown [Medicago truncatula]                          390   e-106

>ref|NP_001234016.1| GTP-binding nuclear protein Ran1 [Solanum lycopersicum]
           gi|585777|sp|P38546.1|RAN1_SOLLC RecName:
           Full=GTP-binding nuclear protein Ran1; AltName:
           Full=Ras-related nuclear protein 1
           gi|453561|gb|AAC37402.1| Ran protein/TC4 protein
           [Solanum lycopersicum] gi|77745509|gb|ABB02653.1|
           Ran/TC4-like protein [Solanum tuberosum]
           gi|82623375|gb|ABB87102.1| Ran protein/TC4 protein-like
           [Solanum tuberosum]
          Length = 221

 Score =  394 bits (1012), Expect = e-107
 Identities = 188/208 (90%), Positives = 190/208 (91%)
 Frame = +1

Query: 1   QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFSTNCGKIRFY 180
           QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDF TNCGKIRFY
Sbjct: 6   QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY 65

Query: 181 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 360
           CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN
Sbjct: 66  CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 125

Query: 361 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDSTLHFVGAVAL 540
           KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD  LHFV + AL
Sbjct: 126 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFVESPAL 185

Query: 541 APPEVHIDXXXXXXXXXXXXMASNQPLP 624
           APPEVHID             A+NQPLP
Sbjct: 186 APPEVHIDLAAQALHEEELQQAANQPLP 213


>emb|CBI21000.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  391 bits (1005), Expect = e-106
 Identities = 187/208 (89%), Positives = 190/208 (91%)
 Frame = +1

Query: 1   QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFSTNCGKIRFY 180
           QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDF TNCGKIRFY
Sbjct: 39  QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY 98

Query: 181 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 360
           CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN
Sbjct: 99  CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 158

Query: 361 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDSTLHFVGAVAL 540
           KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD  LHFV + AL
Sbjct: 159 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPAL 218

Query: 541 APPEVHIDXXXXXXXXXXXXMASNQPLP 624
           APPEVHID             A++QPLP
Sbjct: 219 APPEVHIDLAAQQQHEAELAAAASQPLP 246


>ref|XP_002284967.1| PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera]
           gi|225445410|ref|XP_002285018.1| PREDICTED: GTP-binding
           nuclear protein Ran-3-like [Vitis vinifera]
          Length = 221

 Score =  391 bits (1005), Expect = e-106
 Identities = 187/208 (89%), Positives = 190/208 (91%)
 Frame = +1

Query: 1   QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFSTNCGKIRFY 180
           QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDF TNCGKIRFY
Sbjct: 6   QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY 65

Query: 181 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 360
           CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN
Sbjct: 66  CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 125

Query: 361 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDSTLHFVGAVAL 540
           KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD  LHFV + AL
Sbjct: 126 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPAL 185

Query: 541 APPEVHIDXXXXXXXXXXXXMASNQPLP 624
           APPEVHID             A++QPLP
Sbjct: 186 APPEVHIDLAAQQQHEAELAAAASQPLP 213


>emb|CBI28152.3| unnamed protein product [Vitis vinifera]
          Length = 260

 Score =  391 bits (1005), Expect = e-106
 Identities = 187/208 (89%), Positives = 190/208 (91%)
 Frame = +1

Query: 1   QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFSTNCGKIRFY 180
           QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDF TNCGKIRFY
Sbjct: 45  QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY 104

Query: 181 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 360
           CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN
Sbjct: 105 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 164

Query: 361 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDSTLHFVGAVAL 540
           KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD  LHFV + AL
Sbjct: 165 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPAL 224

Query: 541 APPEVHIDXXXXXXXXXXXXMASNQPLP 624
           APPEVHID             A++QPLP
Sbjct: 225 APPEVHIDLAAQQQHEAELAAAASQPLP 252


>gb|AFK34827.1| unknown [Medicago truncatula]
          Length = 221

 Score =  390 bits (1003), Expect = e-106
 Identities = 187/208 (89%), Positives = 189/208 (90%)
 Frame = +1

Query: 1   QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFSTNCGKIRFY 180
           QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDF TNCGKIRFY
Sbjct: 6   QQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFY 65

Query: 181 CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 360
           CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN
Sbjct: 66  CWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGN 125

Query: 361 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDSTLHFVGAVAL 540
           KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD  LHFV + AL
Sbjct: 126 KVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVESPAL 185

Query: 541 APPEVHIDXXXXXXXXXXXXMASNQPLP 624
           APPEV ID             A+NQPLP
Sbjct: 186 APPEVQIDLAAQQVQENELFQAANQPLP 213


Top