BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000669
         (2283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...   608   e-171
emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]   602   e-169
ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containi...   590   e-166
ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   586   e-164
ref|XP_003607988.1| Pentatricopeptide repeat-containing protein ...   557   e-156

>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
            [Vitis vinifera]
          Length = 593

 Score =  608 bits (1568), Expect = e-171
 Identities = 337/636 (52%), Positives = 408/636 (64%), Gaps = 16/636 (2%)
 Frame = +1

Query: 76   MASLMAIRRNPXXXXXXXXCKVTRPLYHLSNSIFSPIKIQSLNPSFWSIFTEQLSTSVVT 255
            MASL++IRR               PL+   + + SP      +  F    T+ LSTS V 
Sbjct: 1    MASLLSIRR------------ARTPLFSFLSKVPSPY-----SSHFIFTLTKTLSTSAVP 43

Query: 256  NEFQENQNPHTSYNNESXXXXXXXXXXXXXANGNSQTNMNYDKYHSSY----ENYPNRVY 423
            N++Q  Q    S   +               N NSQT       H +Y    ++YPNR Y
Sbjct: 44   NDYQRPQQQPPSEPRDFQDQRNPSY------NWNSQTQSQSYPQHMNYGDQNQSYPNRGY 97

Query: 424  GQRGSGY---SGQNQGFSAPNPTQAQKVPAFRNVNSQNQGYAVQQNPSVSQNYYPRQEG- 591
              +G GY      NQ ++   PT  Q     R  N QNQ Y    NPS+ Q  YP+Q   
Sbjct: 98   PNQGQGYPQHENPNQ-WNRQTPTYPQPQNPSR-PNHQNQYYPPTGNPSLGQG-YPQQRSP 154

Query: 592  ------YQNPGFVQNPAQGYEQQSGGNRWNNHDQGNRQMRSNNNQWSXXXXXXXXXXXXX 753
                  +QNP  + N  Q Y Q    N  +N +Q +   + + +QW+             
Sbjct: 155  NQWNPQHQNPSHLNNQNQNYPQPGSRNLPSNQNQ-SYPHQGSPSQWNNQNPNQAQIVENQ 213

Query: 754  XXYXXXXXXXXXXXXXAPSNVSSTVNLLGLCQQGKVKEVIELLDKGEKADAQCFRLLFEL 933
              +             AP +V+   +L+ LCQ+GKVKE +EL++KG +ADAQCF  LF  
Sbjct: 214  VSH-------------APPSVA---DLMNLCQEGKVKEAVELMEKGVRADAQCFYALFNS 257

Query: 934  CEKSKKYEDAKKVHDYFLRSTCRSDLQLINEVLKMYSKCGSMTDARRVFDHMLERNMDTW 1113
            C   K  E+AKKVHD+FL+ST RSDLQL N+VL+MY  CGSMTDARRVFDHM  R+MD+W
Sbjct: 258  CGSPKLLEEAKKVHDFFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDHMANRDMDSW 317

Query: 1114 HFMIYGYAENGLGDDGLALYEQMRTSGMQPNGETFLAVFDACASADTIEEAFIHFESMRT 1293
            H MI GYA N +GDDGL LYEQMR  G++PN +TFLAV   CASA+ +EE FIHFESM+T
Sbjct: 318  HLMINGYANNAMGDDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKT 377

Query: 1294 EYGMNPGTEHYLGLLGVYGKTGQLAEAKEFIVKLPFEPTADIWEALMNYARIQGDIDLED 1473
            EYG+ P  EHY+G++ V GK+G + EAKEFI ++P EP+A +WEALMNYA+I GDIDLED
Sbjct: 378  EYGITPTFEHYVGIIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAKIHGDIDLED 437

Query: 1474 HAEELMVSLDPSRAXXXXXXXXXXXXHSALNMLEGKNRIIEFRNPTLYKDDEKLR--EAM 1647
            HAEELMV+LDP +A             +A+NML+GKNR+ EFRNPTLYKDDEKL+    M
Sbjct: 438  HAEELMVALDPLKAVANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDDEKLKSLNGM 497

Query: 1648 KQQAYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 1827
            K+  YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH
Sbjct: 498  KEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDCH 557

Query: 1828 NAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 1935
            NAIKIMS+IVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 558  NAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 593


>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score =  602 bits (1553), Expect = e-169
 Identities = 323/585 (55%), Positives = 389/585 (66%), Gaps = 15/585 (2%)
 Frame = +1

Query: 226  TEQLSTSVVTNEFQENQNPHTSYNNESXXXXXXXXXXXXXANGNSQTNMNYDKYHSSY-- 399
            T+ LSTS V N++Q  Q    S   +               N NSQT       H +Y  
Sbjct: 68   TKTLSTSAVPNDYQRPQQQPPSEPRDFQHQRNPNY------NWNSQTQSQSYPQHMNYGE 121

Query: 400  --ENYPNRVYGQRGSGYS--GQNQGFSAPNPTQAQKVPAFRNVNSQNQGYAVQQNPSVSQ 567
              ++YPNR Y  +G GY   G    ++   PT  Q     R  N QNQ Y    NPS+ Q
Sbjct: 122  QNQSYPNRGYPNQGQGYPQHGSPNQWNRQTPTYPQPQNPSRP-NHQNQYYPPTGNPSLGQ 180

Query: 568  NYYPRQEG-------YQNPGFVQNPAQGYEQQSGGNRWNNHDQGNRQMRSNNNQWSXXXX 726
              YP+Q         +QNP  + N  + Y Q    N  +N +Q +   + + +QW+    
Sbjct: 181  G-YPQQRSPNQWNPQHQNPSPLNNQNENYPQPGSRNLPSNQNQ-SYPHQGSPSQWNNQNT 238

Query: 727  XXXXXXXXXXXYXXXXXXXXXXXXXAPSNVSSTVNLLGLCQQGKVKEVIELLDKGEKADA 906
                       +             AP +V+   +L+ LCQ+GKVKE +EL++KG +ADA
Sbjct: 239  NQAQIVENQVSH-------------APPSVA---DLMNLCQEGKVKEAVELMEKGVRADA 282

Query: 907  QCFRLLFELCEKSKKYEDAKKVHDYFLRSTCRSDLQLINEVLKMYSKCGSMTDARRVFDH 1086
            QCF  LF  C   K  E+AKKVHD+FL+ST RSDLQL N+VL+MY  CGSMTDARRVFDH
Sbjct: 283  QCFYALFNSCGSPKLLEEAKKVHDFFLQSTFRSDLQLNNKVLEMYGNCGSMTDARRVFDH 342

Query: 1087 MLERNMDTWHFMIYGYAENGLGDDGLALYEQMRTSGMQPNGETFLAVFDACASADTIEEA 1266
            M  R+MD+WH MI GYA N +GDDGL LYEQMR  G++PN +TFLAV   CASA+ +EE 
Sbjct: 343  MTNRDMDSWHLMINGYANNAMGDDGLQLYEQMRKLGLEPNEQTFLAVLSTCASAEAVEEG 402

Query: 1267 FIHFESMRTEYGMNPGTEHYLGLLGVYGKTGQLAEAKEFIVKLPFEPTADIWEALMNYAR 1446
            FIHFESM+TEYG+ P  EHY+G++ V GK+G + EAKEFI ++P EP+A +WEALMNYA+
Sbjct: 403  FIHFESMKTEYGITPTFEHYVGIIDVLGKSGHVIEAKEFIEQMPVEPSAVVWEALMNYAK 462

Query: 1447 IQGDIDLEDHAEELMVSLDPSRAXXXXXXXXXXXXHSALNMLEGKNRIIEFRNPTLYKDD 1626
            I GDIDLEDHAEELMV+LDP +A             +A+NML+GKNR+ EFRNPTLYKDD
Sbjct: 463  IHGDIDLEDHAEELMVALDPLKAVANKTPTPPPKKRTAINMLDGKNRLSEFRNPTLYKDD 522

Query: 1627 EKLR--EAMKQQAYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 1800
            EKL+    MK+  YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK
Sbjct: 523  EKLKSLNGMKEAGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIK 582

Query: 1801 NLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 1935
            NLRVCGDCHNAIKIMS+IVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 583  NLRVCGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 627


>ref|XP_004137115.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like
            [Cucumis sativus]
          Length = 688

 Score =  590 bits (1521), Expect = e-166
 Identities = 305/539 (56%), Positives = 375/539 (69%), Gaps = 16/539 (2%)
 Frame = +1

Query: 367  NMNYDKYHS-SYENYPNRVYGQRGSGYSGQNQGFSAPNPTQAQKVPAFRNV---NSQNQG 534
            N +Y +Y + S  N PN+ Y Q    Y   +Q  +APN    Q+ P ++N    N  NQ 
Sbjct: 175  NQSYPQYQNPSQTNPPNQSYSQ----YQNPSQP-NAPN----QRYPQYQNPSQPNPPNQS 225

Query: 535  YAVQQNPSVSQNYYPRQEGYQNPGFVQNPAQGYEQQSGGNRWNNHDQGNRQM-------- 690
            +   QNPS S         YQNP     P   Y+QQ G N+WNN +Q + Q         
Sbjct: 226  HPQYQNPSQSNPPNQSYPQYQNPSQPNPPNFNYQQQRGPNQWNNQNQEHPQFGRPEHRNP 285

Query: 691  -RSNNNQWSXXXXXXXXXXXXXXXYXXXXXXXXXXXXXAPSNVSSTVN-LLGLCQQGKVK 864
               N+NQ +                             AP+ + S ++ L   C +GK+K
Sbjct: 286  QAENSNQLNNQAGIQRDGTQNQ----------------APNALVSPIDELRRFCGEGKLK 329

Query: 865  EVIELLDKGEKADAQCFRLLFELCEKSKKYEDAKKVHDYFLRSTCRSDLQLINEVLKMYS 1044
            E +ELL +G KAD  CF LLFELC KSK +++AK VHDYFL+S+CRSDLQL NEVL+MY 
Sbjct: 330  EAVELLKQGVKADVDCFHLLFELCGKSKSFDNAKVVHDYFLQSSCRSDLQLNNEVLEMYG 389

Query: 1045 KCGSMTDARRVFDHMLERNMDTWHFMIYGYAENGLGDDGLALYEQMRTSGMQPNGETFLA 1224
            +CGSM+DARRVFDHM +R++D+WH M+ GYA+NGLGD+GL L+E M+  G+QPN +TFL 
Sbjct: 390  RCGSMSDARRVFDHMPDRSIDSWHLMMKGYADNGLGDEGLELFENMKNLGLQPNSQTFLY 449

Query: 1225 VFDACASADTIEEAFIHFESMRTEYGMNPGTEHYLGLLGVYGKTGQLAEAKEFIVKLPFE 1404
            V  ACASA+ +EE F++FESM+ +Y + P T HYLGLLG+ G+ G + EA E++ KLP E
Sbjct: 450  VMSACASANAVEEGFLYFESMKNDYHITPDTNHYLGLLGILGEPGHIHEAFEYVEKLPME 509

Query: 1405 PTADIWEALMNYARIQGDIDLEDHAEELMVSLDPSRAXXXXXXXXXXXXHSALNMLEGKN 1584
            PT ++WE L NYARI GD+DLED+AEEL+V LDP++A             SA++ML+GKN
Sbjct: 510  PTVEVWETLKNYARIHGDVDLEDYAEELIVDLDPTKAVSNKISTPPPKKRSAISMLDGKN 569

Query: 1585 RIIEFRNPTLYKDDEKLR--EAMKQQAYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 1758
            RI+EFRNPTLYKDDEKL+  +AMK+Q YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG
Sbjct: 570  RIVEFRNPTLYKDDEKLKALKAMKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYG 629

Query: 1759 LISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 1935
            LISTPARTPLRIIKNLR+CGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 630  LISTPARTPLRIIKNLRICGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 688


>ref|XP_004166669.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At2g15690-like [Cucumis sativus]
          Length = 588

 Score =  586 bits (1510), Expect = e-164
 Identities = 324/637 (50%), Positives = 404/637 (63%), Gaps = 17/637 (2%)
 Frame = +1

Query: 76   MASLMAIRRNPXXXXXXXXCKVTRPLYHLSNSIFSPIKIQSLNPSFWSIFTEQLSTSVVT 255
            MASLMA+RR              +  Y LS+      + Q+          + LSTS + 
Sbjct: 1    MASLMAVRR----ARTPIIVSSFKVRYPLSSCFTFTFRNQT------ETLIKTLSTSAIP 50

Query: 256  NEFQENQNPHTSYNNESXXXXXXXXXXXXXANGNSQTNMNYDKYHSSYENYPNRVYGQRG 435
            N+F    +     ++ S              N  S+ N N    H S+  + NR Y Q+G
Sbjct: 51   NDFSNFPSSPQQPSSSSPSYRQPQWGSPSQVNPPSE-NFN----HQSFSEFQNRDYAQQG 105

Query: 436  S-----GYSGQNQGFSAPNPTQAQKVPAFRNVNSQNQGYAVQQNPSVSQNYYPRQEGYQN 600
            S      Y  Q+Q    PNP            + Q Q Y+ Q  P+ S   YP+   YQN
Sbjct: 106  SHGNQLNYRSQHQS-PQPNP----------GFSRQGQSYS-QPLPNQS---YPQ---YQN 147

Query: 601  PGFVQNPAQGYEQQSGGNRWNNHDQGNRQM---------RSNNNQWSXXXXXXXXXXXXX 753
            P     P   Y+QQ G N+WNN +Q + Q            N+NQ +             
Sbjct: 148  PSQPNPPNFNYQQQRGPNQWNNQNQEHPQFGRPEHRNPQAENSNQLNNQAGIQRDGTQNQ 207

Query: 754  XXYXXXXXXXXXXXXXAPSNVSSTVN-LLGLCQQGKVKEVIELLDKGEKADAQCFRLLFE 930
                            AP+ + S ++ L   C +GK+KE +ELL +G KAD  CF LLFE
Sbjct: 208  ----------------APNALVSPIDELRRFCGEGKLKEAVELLKQGVKADVDCFHLLFE 251

Query: 931  LCEKSKKYEDAKKVHDYFLRSTCRSDLQLINEVLKMYSKCGSMTDARRVFDHMLERNMDT 1110
            LC KSK +++AK VHDYFL+S+CRSDLQL NEVL+MY +CGSM+DARRVFDHM +R++D+
Sbjct: 252  LCGKSKSFDNAKVVHDYFLQSSCRSDLQLNNEVLEMYGRCGSMSDARRVFDHMPDRSIDS 311

Query: 1111 WHFMIYGYAENGLGDDGLALYEQMRTSGMQPNGETFLAVFDACASADTIEEAFIHFESMR 1290
            WH M+ GYA+NGLGD+GL L+E M+  G+QPN +TFL V  ACASA+ +EE F++FESM+
Sbjct: 312  WHLMMKGYADNGLGDEGLELFENMKNLGLQPNSQTFLYVMSACASANAVEEGFLYFESMK 371

Query: 1291 TEYGMNPGTEHYLGLLGVYGKTGQLAEAKEFIVKLPFEPTADIWEALMNYARIQGDIDLE 1470
             +Y + P T HYLGLLG+ G+ G + EA E++ KLP EPT ++WE L NYARI GD+DLE
Sbjct: 372  NDYHITPDTNHYLGLLGILGEPGHIHEAFEYVEKLPMEPTVEVWETLKNYARIHGDVDLE 431

Query: 1471 DHAEELMVSLDPSRAXXXXXXXXXXXXHSALNMLEGKNRIIEFRNPTLYKDDEKLR--EA 1644
            D+AEEL+V LDP++A             SA++ML+GKNRI+EFRNPTLYKDD KL+  +A
Sbjct: 432  DYAEELIVDLDPTKAVSNKISTPPPKNXSAISMLDGKNRIVEFRNPTLYKDDXKLKALKA 491

Query: 1645 MKQQAYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRVCGDC 1824
            MK+Q YVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLR+CGDC
Sbjct: 492  MKEQGYVPDTRYVLHDIDQEAKEQALLYHSERLAIAYGLISTPARTPLRIIKNLRICGDC 551

Query: 1825 HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 1935
            HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW
Sbjct: 552  HNAIKIMSRIVGRELIVRDNKRFHHFKDGKCSCGDYW 588


>ref|XP_003607988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355509043|gb|AES90185.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 565

 Score =  557 bits (1436), Expect = e-156
 Identities = 310/607 (51%), Positives = 383/607 (63%), Gaps = 16/607 (2%)
 Frame = +1

Query: 163  SNSIFSPIKIQSLNPSFWSIFTEQLSTSVVTNEF-----QENQNPHTSYNNESXXXXXXX 327
            S+S F  +K++S N    + F + LSTS + NE+      + Q P + +N          
Sbjct: 17   SSSSFFSLKLRS-NYIHGNHFCKTLSTSAIPNEYGRLPPHQVQQPPSDHNQHFN------ 69

Query: 328  XXXXXXANGNSQTNMNYDKYHSSYENYPNRVYGQRGSGYSGQNQGFSAPNPTQA---QKV 498
                                H + +N P R   Q    ++ QN  F  P P Q    ++ 
Sbjct: 70   --------------------HHNTQNAPGRFPQQ---DWNPQNPNFRPPQPPQNPNYRQQ 106

Query: 499  PAFRNVN------SQNQGYAVQQNPSVSQNYYPRQEGYQNPGFVQNPAQGYEQQSGGNRW 660
            P  +N N       QN  +   + P   QN   RQ   QNP F   P  G  +    N+W
Sbjct: 107  PPPQNPNFRPPPPPQNPNF---RPPPPPQNPNFRQPIRQNPNF--QPPNGPNRGINQNQW 161

Query: 661  NNHDQGNRQMRSNNNQWSXXXXXXXXXXXXXXXYXXXXXXXXXXXXXAPSNVSSTVNLLG 840
            N  +    Q ++ NNQ+                              AP    S V+L  
Sbjct: 162  NPQNGNLNQFQNPNNQFQTPNVQEQ----------------------APPP-PSIVDLTR 198

Query: 841  LCQQGKVKEVIELLDKGEKADAQCFRLLFELCEKSKKYEDAKKVHDYFLRSTCRSDLQLI 1020
             CQ+GKVKE +EL++KG KADA CF +LF+LC KSK  EDAKKVHDYFL+ST RSD ++ 
Sbjct: 199  FCQEGKVKEALELMEKGIKADANCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSDFKMH 258

Query: 1021 NEVLKMYSKCGSMTDARRVFDHMLERNMDTWHFMIYGYAENGLGDDGLALYEQMRTSGMQ 1200
            N+V++MY  C SMTDARRVFDHM  RNMD+WH MI GYA + +GD+GL L+EQM   G++
Sbjct: 259  NKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLE 318

Query: 1201 PNGETFLAVFDACASADTIEEAFIHFESMRTEYGMNPGTEHYLGLLGVYGKTGQLAEAKE 1380
               ET LAV  AC SA+ +E+A+I+ ESM+++YG+ PG EHY+GLL V G++G L EA+E
Sbjct: 319  ITSETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGYLKEAEE 378

Query: 1381 FIVKLPFEPTADIWEALMNYARIQGDIDLEDHAEELMVSLDPSRAXXXXXXXXXXXXHSA 1560
            FI +LPFEPT  ++E L NYARI GD+DLEDH EEL+VSLDPS+A            ++A
Sbjct: 379  FIEQLPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDPSKAVANKIPTPPPKKYTA 438

Query: 1561 LNMLEGKNRIIEFRNPTLYKDDEKL--REAMKQQAYVPDTRYVLHDIDQEAKEQALLYHS 1734
            ++ML+GKNRIIE++NPTLYKDDEKL    +MK   YVPDTRYVLHDIDQEAKEQALLYHS
Sbjct: 439  ISMLDGKNRIIEYKNPTLYKDDEKLIAMNSMKDAGYVPDTRYVLHDIDQEAKEQALLYHS 498

Query: 1735 ERLAIAYGLISTPARTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 1914
            ERLAIAYGLISTP RTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK
Sbjct: 499  ERLAIAYGLISTPPRTPLRIIKNLRVCGDCHNAIKIMSRIVGRELIVRDNKRFHHFKDGK 558

Query: 1915 CSCGDYW 1935
            CSCGDYW
Sbjct: 559  CSCGDYW 565