BLASTX nr result

ID: Lithospermum22_contig00000521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000521
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   412   e-155
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   410   e-155
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   409   e-153
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   404   e-152
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...   392   e-149

>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  412 bits (1058), Expect(2) = e-155
 Identities = 196/248 (79%), Positives = 228/248 (91%)
 Frame = +1

Query: 1    NVNEIVSASVVCCHRAKIDIPMLATEWTQLGVLSHFTVVCKIDGGIFPMGFTKEVAARNS 180
            NVNEIVSASV+CCH+AKID PMLA+EW + G+LSHFTVV K+DGGIFPMGF+KEV  RN+
Sbjct: 358  NVNEIVSASVICCHKAKIDTPMLASEWKKPGMLSHFTVVRKLDGGIFPMGFSKEVTDRNT 417

Query: 181  KAGTNVVISETSERALLNRLMLELHKLDADVLVGHNISGFDLDILLHRVQACSVPSTTWS 360
             AG+NV+  E+SERALLNRLM+ LHKLD+D LVGHNISGFDLD+LLHR QAC VPS+TWS
Sbjct: 418  MAGSNVLAIESSERALLNRLMIALHKLDSDFLVGHNISGFDLDVLLHRTQACRVPSSTWS 477

Query: 361  KIGRLKRSVMPKLTKGSSIFGSGATPGILSCVAGRLLCDTFLCSRDLLKEVSYSLTELSK 540
            KIGRLKRSVMPKLTKG++IFGSGA+PGI+SC+AGRLLCDT+L SRDLLKEVSYSLT+L+K
Sbjct: 478  KIGRLKRSVMPKLTKGNAIFGSGASPGIMSCIAGRLLCDTYLASRDLLKEVSYSLTQLAK 537

Query: 541  SQLKKDRKEIAPHDIPRMFQSSELLMELIEYGETDAWLSMELMFHLNVLPRTRELTNTCG 720
            ++L KDRKEIAPHDIP MFQ+S+ L+EL+EYGETDAWLSMELMFHL++LP TR+LTN  G
Sbjct: 538  TRLNKDRKEIAPHDIPTMFQTSKSLIELVEYGETDAWLSMELMFHLSILPLTRQLTNISG 597

Query: 721  NLWGKTLQ 744
            NLWGKTLQ
Sbjct: 598  NLWGKTLQ 605



 Score =  164 bits (416), Expect(2) = e-155
 Identities = 82/135 (60%), Positives = 97/135 (71%)
 Frame = +3

Query: 825  RAQIVEYYLLHAFHAKKYIVPDXXXXXXXXXXXXXXXXXHGAEGKEGNDLEIDDTNNEAE 1004
            RAQ VEY LLHAFHAKKYIVPD                 +G E +  ++L+ D  N E +
Sbjct: 608  RAQRVEYLLLHAFHAKKYIVPDKMSSRVKEAKITKRRINNGIEDRNADELDTDAANFEND 667

Query: 1005 LLVSHLVKSRKGPSYSGGLVLEPKRGLYDKYIVLLDFNSLYPSIIQEYNICFTTVERSAD 1184
               S   K +KGP+Y+GGLVLEPK+GLYDKY++LLDFNSLYPSIIQEYNICFTTVERS D
Sbjct: 668  NQQSDHGKRKKGPAYAGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERSMD 727

Query: 1185 GMIPRLPSKRTVGVL 1229
            G++PRLPS +T GVL
Sbjct: 728  GLVPRLPSSKTTGVL 742


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  410 bits (1053), Expect(2) = e-155
 Identities = 193/248 (77%), Positives = 229/248 (92%)
 Frame = +1

Query: 1    NVNEIVSASVVCCHRAKIDIPMLATEWTQLGVLSHFTVVCKIDGGIFPMGFTKEVAARNS 180
            N+NEIVSASV+CCH AKID PML +EWT+ G+LSHFTVV K++GGIFPMGFTKE A RN+
Sbjct: 609  NINEIVSASVICCHSAKIDAPMLTSEWTKPGMLSHFTVVRKLEGGIFPMGFTKEAAERNT 668

Query: 181  KAGTNVVISETSERALLNRLMLELHKLDADVLVGHNISGFDLDILLHRVQACSVPSTTWS 360
            KAG+NV+  E+SERALLNRLM+ELHKL++DVL+GHNISGFDLD+LLHRVQAC VPS+ WS
Sbjct: 669  KAGSNVISFESSERALLNRLMIELHKLESDVLIGHNISGFDLDVLLHRVQACKVPSSMWS 728

Query: 361  KIGRLKRSVMPKLTKGSSIFGSGATPGILSCVAGRLLCDTFLCSRDLLKEVSYSLTELSK 540
            KIGRLKRSVMPKLTKGS++FGSGA+PGI+SC++GRLLCDT+L SR+LLKEVSYSLT+L K
Sbjct: 729  KIGRLKRSVMPKLTKGSTLFGSGASPGIMSCISGRLLCDTYLSSRELLKEVSYSLTQLVK 788

Query: 541  SQLKKDRKEIAPHDIPRMFQSSELLMELIEYGETDAWLSMELMFHLNVLPRTRELTNTCG 720
            +QL KDRKEI+PHD+P+MFQ+++ L+ELIE GETDAWLSMELMFHL+VLP TR+LTN  G
Sbjct: 789  NQLNKDRKEISPHDVPQMFQAADSLLELIECGETDAWLSMELMFHLSVLPLTRQLTNISG 848

Query: 721  NLWGKTLQ 744
            NLWGKTLQ
Sbjct: 849  NLWGKTLQ 856



 Score =  165 bits (417), Expect(2) = e-155
 Identities = 84/135 (62%), Positives = 95/135 (70%)
 Frame = +3

Query: 825  RAQIVEYYLLHAFHAKKYIVPDXXXXXXXXXXXXXXXXXHGAEGKEGNDLEIDDTNNEAE 1004
            RAQ VEY LLHAFHAKK+IVPD                  G EGKE   ++ DD N E  
Sbjct: 859  RAQRVEYLLLHAFHAKKFIVPDKFSSHAREAKITKRKLNQGDEGKETEPIDADDPNIEGG 918

Query: 1005 LLVSHLVKSRKGPSYSGGLVLEPKRGLYDKYIVLLDFNSLYPSIIQEYNICFTTVERSAD 1184
            +L  +  K++KGPSYSGGLVLEPKRGLYDKYI+LLDFNSLYPSIIQEYNICFTTVE S D
Sbjct: 919  ILDINHGKAKKGPSYSGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVESSLD 978

Query: 1185 GMIPRLPSKRTVGVL 1229
            G +P LPS +  G+L
Sbjct: 979  GSVPHLPSSKRTGLL 993


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  409 bits (1052), Expect(2) = e-153
 Identities = 194/248 (78%), Positives = 230/248 (92%)
 Frame = +1

Query: 1    NVNEIVSASVVCCHRAKIDIPMLATEWTQLGVLSHFTVVCKIDGGIFPMGFTKEVAARNS 180
            NVNEIVSAS++CCH+AKID PMLA+EW + G+LSHFTVV K+DGGIFPMGF+KEV  RN+
Sbjct: 572  NVNEIVSASLICCHKAKIDTPMLASEWKKPGMLSHFTVVRKLDGGIFPMGFSKEVTERNT 631

Query: 181  KAGTNVVISETSERALLNRLMLELHKLDADVLVGHNISGFDLDILLHRVQACSVPSTTWS 360
            +AG+NV+  E+SERALLNRLM+ L+KLD+DVLVGHNISGFDLD+LLHR QAC VPS+ WS
Sbjct: 632  QAGSNVLGIESSERALLNRLMIALNKLDSDVLVGHNISGFDLDVLLHRSQACRVPSSMWS 691

Query: 361  KIGRLKRSVMPKLTKGSSIFGSGATPGILSCVAGRLLCDTFLCSRDLLKEVSYSLTELSK 540
            KIGRLKRS+MPKLTKG+++FGSGA+PGI+SC+AGRLLCDT+LCSRDLLKEVSYSLTEL++
Sbjct: 692  KIGRLKRSIMPKLTKGNTMFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTELAR 751

Query: 541  SQLKKDRKEIAPHDIPRMFQSSELLMELIEYGETDAWLSMELMFHLNVLPRTRELTNTCG 720
            ++L KDRKE+ PHDIPRMFQSS+ L+ELIE+GETDAWLSMELMFHL+VLP TR+LTN  G
Sbjct: 752  TRLNKDRKEVTPHDIPRMFQSSKSLIELIEFGETDAWLSMELMFHLSVLPLTRQLTNISG 811

Query: 721  NLWGKTLQ 744
            NLWGKTLQ
Sbjct: 812  NLWGKTLQ 819



 Score =  159 bits (402), Expect(2) = e-153
 Identities = 81/136 (59%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
 Frame = +3

Query: 825  RAQIVEYYLLHAFHAKKYIVPDXXXXXXXXXXXXXXXXXH-GAEGKEGNDLEIDDTNNEA 1001
            RAQ VEY LLHAFHAKKYIVPD                 H G E K   +L+ D  N + 
Sbjct: 822  RAQRVEYLLLHAFHAKKYIVPDKNSFHLKKETKMTKRRIHNGVEEKNAEELDTDHANFDN 881

Query: 1002 ELLVSHLVKSRKGPSYSGGLVLEPKRGLYDKYIVLLDFNSLYPSIIQEYNICFTTVERSA 1181
            +   +   K +KGP+Y GGLVLEPK+GLYDKY++LLDFNSLYPSIIQEYNICFTTVE+S 
Sbjct: 882  DSPENDRGKGKKGPAYVGGLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVEKST 941

Query: 1182 DGMIPRLPSKRTVGVL 1229
            DG++PRLPS +T GVL
Sbjct: 942  DGLVPRLPSIKTTGVL 957


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  404 bits (1038), Expect(2) = e-152
 Identities = 197/248 (79%), Positives = 223/248 (89%)
 Frame = +1

Query: 1    NVNEIVSASVVCCHRAKIDIPMLATEWTQLGVLSHFTVVCKIDGGIFPMGFTKEVAARNS 180
            NVNEIVSASV+CCH+ KID PML +EW + GVLSHFTVV K+DGGIFPMGFTKE + RNS
Sbjct: 574  NVNEIVSASVICCHKVKIDSPMLPSEWKRPGVLSHFTVVRKLDGGIFPMGFTKEASDRNS 633

Query: 181  KAGTNVVISETSERALLNRLMLELHKLDADVLVGHNISGFDLDILLHRVQACSVPSTTWS 360
            KAG NV+ SE SERALLNRLM+EL+KLD+DVLVGHNISGFDLD+LLHR +AC VP   WS
Sbjct: 634  KAGANVLCSEISERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAEACKVPM--WS 691

Query: 361  KIGRLKRSVMPKLTKGSSIFGSGATPGILSCVAGRLLCDTFLCSRDLLKEVSYSLTELSK 540
            KIGRLKR VMPKLT+GS+IFGSGA+PGI+SC+AGRLLCDT+LCSRDLLKEVSYSLT+L+K
Sbjct: 692  KIGRLKRRVMPKLTRGSTIFGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAK 751

Query: 541  SQLKKDRKEIAPHDIPRMFQSSELLMELIEYGETDAWLSMELMFHLNVLPRTRELTNTCG 720
            +QL KDRKEIAP D+ RMFQ+SE L++LIEYGETDAWLSMELMFHL+VLP TR LTN  G
Sbjct: 752  TQLNKDRKEIAPQDVSRMFQTSESLVQLIEYGETDAWLSMELMFHLSVLPLTRLLTNISG 811

Query: 721  NLWGKTLQ 744
            NLWGKTLQ
Sbjct: 812  NLWGKTLQ 819



 Score =  162 bits (411), Expect(2) = e-152
 Identities = 84/136 (61%), Positives = 98/136 (72%), Gaps = 1/136 (0%)
 Frame = +3

Query: 825  RAQIVEYYLLHAFHAKKYIVPDXXXXXXXXXXXXXXXXXHG-AEGKEGNDLEIDDTNNEA 1001
            RAQ VEY LLH FHAKKYIVPD                  G AE +  ++L++DD + E 
Sbjct: 822  RAQRVEYLLLHEFHAKKYIVPDKISSHLRETKWTKRRMNQGGAEDRNIDELDVDDAHVEN 881

Query: 1002 ELLVSHLVKSRKGPSYSGGLVLEPKRGLYDKYIVLLDFNSLYPSIIQEYNICFTTVERSA 1181
            +   ++  K +KGP+YSGGLVLEPKRGLYDKYI+LLDFNSLYPSIIQEYNICFTTVERS 
Sbjct: 882  DAHHNNQGKGKKGPAYSGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSP 941

Query: 1182 DGMIPRLPSKRTVGVL 1229
            DG +PRLPS +T GVL
Sbjct: 942  DGSVPRLPSSKTTGVL 957


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
            sativus]
          Length = 1547

 Score =  392 bits (1008), Expect(2) = e-149
 Identities = 188/248 (75%), Positives = 220/248 (88%)
 Frame = +1

Query: 1    NVNEIVSASVVCCHRAKIDIPMLATEWTQLGVLSHFTVVCKIDGGIFPMGFTKEVAARNS 180
            +VNEIVSASV+CC RAKID PMLATEW + G+L HFTV+ K+DGGIFPMGF KE   RNS
Sbjct: 597  SVNEIVSASVICCQRAKIDGPMLATEWKKPGMLRHFTVIRKLDGGIFPMGFAKESTDRNS 656

Query: 181  KAGTNVVISETSERALLNRLMLELHKLDADVLVGHNISGFDLDILLHRVQACSVPSTTWS 360
            KAG+NV+I E +ERALLNRLM+EL KLD+DVLVGHNISGFDLD+LLHR Q C VPS+ WS
Sbjct: 657  KAGSNVLICEGNERALLNRLMIELFKLDSDVLVGHNISGFDLDVLLHRAQFCRVPSSMWS 716

Query: 361  KIGRLKRSVMPKLTKGSSIFGSGATPGILSCVAGRLLCDTFLCSRDLLKEVSYSLTELSK 540
            KIGRLKRSVMPKL KG +IFGSGA+PG++SC+AGRLLCDT+L SRDLLKE+SYSLTEL+K
Sbjct: 717  KIGRLKRSVMPKLGKGGNIFGSGASPGLMSCIAGRLLCDTYLSSRDLLKEISYSLTELAK 776

Query: 541  SQLKKDRKEIAPHDIPRMFQSSELLMELIEYGETDAWLSMELMFHLNVLPRTRELTNTCG 720
            +QL KDRKE+  H+IP+M+Q+SE LM LIEYGETDAWLS+ELMFHL+VLP TR+LTN  G
Sbjct: 777  TQLNKDRKEVTSHEIPKMYQASESLMNLIEYGETDAWLSLELMFHLSVLPLTRQLTNISG 836

Query: 721  NLWGKTLQ 744
            NLWG++LQ
Sbjct: 837  NLWGRSLQ 844



 Score =  165 bits (417), Expect(2) = e-149
 Identities = 87/135 (64%), Positives = 95/135 (70%)
 Frame = +3

Query: 825  RAQIVEYYLLHAFHAKKYIVPDXXXXXXXXXXXXXXXXXHGAEGKEGNDLEIDDTNNEAE 1004
            RAQ VEY LLHAFHAKKYIVPD                 HG+E K  +  ++DD N EA 
Sbjct: 847  RAQRVEYLLLHAFHAKKYIVPDKNSSYVKDKKIVKKRTNHGSEEKNVDQFDLDDGNVEAP 906

Query: 1005 LLVSHLVKSRKGPSYSGGLVLEPKRGLYDKYIVLLDFNSLYPSIIQEYNICFTTVERSAD 1184
               S   K +KGPSY GGLVLEPKRGLYDKY++LLDFNSLYPSIIQEYNICFTTVERS D
Sbjct: 907  NTDSG--KGKKGPSYLGGLVLEPKRGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERSPD 964

Query: 1185 GMIPRLPSKRTVGVL 1229
            G+IP LPS R  GVL
Sbjct: 965  GVIPPLPSSRVTGVL 979


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