BLASTX nr result

ID: Lithospermum22_contig00000483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000483
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Popu...   144   3e-32
ref|XP_002516025.1| Photosystem I reaction center subunit VI, ch...   142   9e-32
ref|XP_002891683.1| hypothetical protein ARALYDRAFT_474340 [Arab...   142   1e-31
ref|NP_175633.1| photosystem I reaction center subunit VI-2 [Ara...   142   1e-31
ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycin...   140   3e-31

>ref|XP_002304206.1| hypothetical protein POPTRDRAFT_712066 [Populus trichocarpa]
           gi|118487059|gb|ABK95360.1| unknown [Populus
           trichocarpa] gi|222841638|gb|EEE79185.1| hypothetical
           protein POPTRDRAFT_712066 [Populus trichocarpa]
          Length = 144

 Score =  144 bits (362), Expect = 3e-32
 Identities = 71/104 (68%), Positives = 77/104 (74%)
 Frame = -2

Query: 787 VTSYAAAQSCTIXXXXXXXXXXXXLHIKPSNLTFKSSKQRSGCVVAKYGEKSVYFDLEDL 608
           + ++AA Q  TI            LH+KPS    +    RSG VVAKYG+KSVYFDLEDL
Sbjct: 4   LATFAAVQPATIKGLGGSSLSGTKLHVKPSRQGLRPKSLRSGAVVAKYGDKSVYFDLEDL 63

Query: 607 GNTTGQWDLYGSDAPSPYNPLQSKFFETFGAPFTKRGLLLKFCI 476
           GNTTGQWDLYGSDAPSPYNPLQSKFFETF APFTKRGLLLKF I
Sbjct: 64  GNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLI 107


>ref|XP_002516025.1| Photosystem I reaction center subunit VI, chloroplast precursor,
           putative [Ricinus communis] gi|223544930|gb|EEF46445.1|
           Photosystem I reaction center subunit VI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 144

 Score =  142 bits (358), Expect = 9e-32
 Identities = 68/104 (65%), Positives = 78/104 (75%)
 Frame = -2

Query: 787 VTSYAAAQSCTIXXXXXXXXXXXXLHIKPSNLTFKSSKQRSGCVVAKYGEKSVYFDLEDL 608
           + ++AA Q  T+            LH+KPS  + +   +R+G V AKYG+KSVYFDLEDL
Sbjct: 4   LATFAAVQPATVKGLGGSSLTGTKLHVKPSRQSLRPKNRRNGAVEAKYGDKSVYFDLEDL 63

Query: 607 GNTTGQWDLYGSDAPSPYNPLQSKFFETFGAPFTKRGLLLKFCI 476
           GNTTGQWDLYGSDAPSPYNPLQSKFFETF APFTKRGLLLKF I
Sbjct: 64  GNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLI 107


>ref|XP_002891683.1| hypothetical protein ARALYDRAFT_474340 [Arabidopsis lyrata subsp.
           lyrata] gi|297337525|gb|EFH67942.1| hypothetical protein
           ARALYDRAFT_474340 [Arabidopsis lyrata subsp. lyrata]
          Length = 145

 Score =  142 bits (357), Expect = 1e-31
 Identities = 71/108 (65%), Positives = 78/108 (72%)
 Frame = -2

Query: 799 MALYVTSYAAAQSCTIXXXXXXXXXXXXLHIKPSNLTFKSSKQRSGCVVAKYGEKSVYFD 620
           MA + T  A   S  +            L IKPS  +FK+   R+G VVAKYG+KSVYFD
Sbjct: 1   MASFATIAAVQPSAAVKGLGGSSLVGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFD 60

Query: 619 LEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFGAPFTKRGLLLKFCI 476
           LEDLGNTTGQWD+YGSDAPSPYNPLQSKFFETF APFTKRGLLLKF I
Sbjct: 61  LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLI 108


>ref|NP_175633.1| photosystem I reaction center subunit VI-2 [Arabidopsis thaliana]
           gi|17369623|sp|Q9SUI6.1|PSAH2_ARATH RecName:
           Full=Photosystem I reaction center subunit VI-2,
           chloroplastic; AltName: Full=PSI-H1; Flags: Precursor
           gi|6850347|gb|AAF29410.1|AC022354_9 photosystem I
           subunit VI precursor [Arabidopsis thaliana]
           gi|14326518|gb|AAK60304.1|AF385712_1 At1g52230/F9I5_11
           [Arabidopsis thaliana] gi|5734524|emb|CAB52750.1|
           photosystem I subunit VI precursor [Arabidopsis
           thaliana] gi|21553440|gb|AAM62533.1| Photosystem I
           reaction center subunit VI-2, chloroplast precursor
           (PSI-H1) [Arabidopsis thaliana]
           gi|22137304|gb|AAM91497.1| At1g52230/F9I5_11
           [Arabidopsis thaliana] gi|332194651|gb|AEE32772.1|
           photosystem I reaction center subunit VI-2 [Arabidopsis
           thaliana]
          Length = 145

 Score =  142 bits (357), Expect = 1e-31
 Identities = 71/108 (65%), Positives = 78/108 (72%)
 Frame = -2

Query: 799 MALYVTSYAAAQSCTIXXXXXXXXXXXXLHIKPSNLTFKSSKQRSGCVVAKYGEKSVYFD 620
           MA + T  A   S  +            L IKPS  +FK+   R+G VVAKYG+KSVYFD
Sbjct: 1   MASFATIAAVQPSAAVKGLGGSSLAGAKLFIKPSRQSFKTKSTRAGAVVAKYGDKSVYFD 60

Query: 619 LEDLGNTTGQWDLYGSDAPSPYNPLQSKFFETFGAPFTKRGLLLKFCI 476
           LEDLGNTTGQWD+YGSDAPSPYNPLQSKFFETF APFTKRGLLLKF I
Sbjct: 61  LEDLGNTTGQWDVYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLI 108


>ref|NP_001236618.1| uncharacterized protein LOC100499832 [Glycine max]
           gi|255627007|gb|ACU13848.1| unknown [Glycine max]
          Length = 144

 Score =  140 bits (354), Expect = 3e-31
 Identities = 72/104 (69%), Positives = 76/104 (73%)
 Frame = -2

Query: 787 VTSYAAAQSCTIXXXXXXXXXXXXLHIKPSNLTFKSSKQRSGCVVAKYGEKSVYFDLEDL 608
           + + AA Q  TI            L  KPS  + KS   RSG VVAKYG+KSVYFDLEDL
Sbjct: 4   LATLAAVQPATINGLAGSSLSGTKLSFKPSRHSVKSKNFRSGAVVAKYGDKSVYFDLEDL 63

Query: 607 GNTTGQWDLYGSDAPSPYNPLQSKFFETFGAPFTKRGLLLKFCI 476
           GNTTGQWDLYGSDAPSPYNPLQSKFFETF APFTKRGLLLKF I
Sbjct: 64  GNTTGQWDLYGSDAPSPYNPLQSKFFETFAAPFTKRGLLLKFLI 107


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