BLASTX nr result

ID: Lithospermum22_contig00000413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00000413
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513246.1| Cytochrome b6-f complex iron-sulfur subunit,...   305   1e-80
emb|CAA29590.1| Rieske FeS-precursor [Spinacia oleracea] gi|2261...   304   2e-80
gb|ACU14088.1| unknown [Glycine max]                                  303   4e-80
ref|XP_003543368.1| PREDICTED: cytochrome b6-f complex iron-sulf...   303   6e-80
gb|AFK33315.1| unknown [Lotus japonicus]                              302   8e-80

>ref|XP_002513246.1| Cytochrome b6-f complex iron-sulfur subunit, chloroplast precursor,
           putative [Ricinus communis] gi|223547620|gb|EEF49114.1|
           Cytochrome b6-f complex iron-sulfur subunit, chloroplast
           precursor, putative [Ricinus communis]
          Length = 220

 Score =  305 bits (781), Expect = 1e-80
 Identities = 156/229 (68%), Positives = 168/229 (73%)
 Frame = -3

Query: 955 MASSTLSPITPSQLCSTKNIAQAVFVKPMRSHTXXXXXXXXXXXGIRCMATSIPADNVPD 776
           MASSTLSP T SQLCS K    AVF++P R+H             + C ATSIPAD VPD
Sbjct: 1   MASSTLSPPTTSQLCSGKX---AVFLRPTRTHMVTKDRAMK----LTCQATSIPADRVPD 53

Query: 775 MEKRKXXXXXXXXXXXXXXXXXXXPYTYFFVPPXXXXXXXGTVAKDALGNDVVAAEWLKV 596
           M KR+                   PY  FF PP       GTVAKDA+GNDV+A  WLK 
Sbjct: 54  MGKRQLMNLLLLGAISLPTGFMLVPYASFFAPPGTGGAGGGTVAKDAVGNDVIAELWLKT 113

Query: 595 HGPNDRTLTQGLKGDPTYLVVESDRTLATYGINAVCTHLGCVVPWNAAENKFLCPCHGSQ 416
           HGP DRTLTQGLKGDPTYLVVE DRTLATYGINAVCTHLGCVVPWNAAENKF+CPCHGSQ
Sbjct: 114 HGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQ 173

Query: 415 YNNQGKVVRGPAPLSLALAHADVNVDDGKVVFVPWVETDFRTGDAPWWS 269
           YN+QG+VVRGPAPLSLALAHAD  +DDGKVVFVPWVETDFRTGDAPWW+
Sbjct: 174 YNDQGRVVRGPAPLSLALAHAD--IDDGKVVFVPWVETDFRTGDAPWWA 220


>emb|CAA29590.1| Rieske FeS-precursor [Spinacia oleracea] gi|226151|prf||1412276A
           rieske FeS precursor protein
          Length = 247

 Score =  304 bits (779), Expect = 2e-80
 Identities = 155/243 (63%), Positives = 172/243 (70%), Gaps = 2/243 (0%)
 Frame = -3

Query: 991 FSIFHLLSSRKAMASSTLSPITPSQLCSTKN--IAQAVFVKPMRSHTXXXXXXXXXXXGI 818
           F+  HL  +   MAS TLS  TPSQLCS+KN   A ++ +                   +
Sbjct: 6   FNQLHLTENSSLMASFTLSSATPSQLCSSKNGMFAPSLALAKAGRVNVLISKERIRGMKL 65

Query: 817 RCMATSIPADNVPDMEKRKXXXXXXXXXXXXXXXXXXXPYTYFFVPPXXXXXXXGTVAKD 638
            C ATSIPADNVPDM+KR+                   PY  FFVPP       GT+AKD
Sbjct: 66  TCQATSIPADNVPDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKD 125

Query: 637 ALGNDVVAAEWLKVHGPNDRTLTQGLKGDPTYLVVESDRTLATYGINAVCTHLGCVVPWN 458
           ALGNDV+AAEWLK H P DRTLTQGLKGDPTYLVVESD+TLAT+GINAVCTHLGCVVP+N
Sbjct: 126 ALGNDVIAAEWLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFN 185

Query: 457 AAENKFLCPCHGSQYNNQGKVVRGPAPLSLALAHADVNVDDGKVVFVPWVETDFRTGDAP 278
           AAENKF+CPCHGSQYNNQG+VVRGPAPLSLALAH D  VDDGKVVFVPW ETDFRTG+AP
Sbjct: 186 AAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHCD--VDDGKVVFVPWTETDFRTGEAP 243

Query: 277 WWS 269
           WWS
Sbjct: 244 WWS 246


>gb|ACU14088.1| unknown [Glycine max]
          Length = 227

 Score =  303 bits (777), Expect = 4e-80
 Identities = 154/233 (66%), Positives = 168/233 (72%), Gaps = 4/233 (1%)
 Frame = -3

Query: 955 MASSTLSPITPSQLCSTKN----IAQAVFVKPMRSHTXXXXXXXXXXXGIRCMATSIPAD 788
           MAS+TLSP TPSQLCS K+     +QA+ VKP++               I C ATSIPAD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFSPSQALLVKPVKRQMMGKSKGMR----IACQATSIPAD 56

Query: 787 NVPDMEKRKXXXXXXXXXXXXXXXXXXXPYTYFFVPPXXXXXXXGTVAKDALGNDVVAAE 608
            VPDM KR+                   PYTYFFVPP       GTVAKDA+GNDV+A  
Sbjct: 57  RVPDMGKRQLMNLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAEN 116

Query: 607 WLKVHGPNDRTLTQGLKGDPTYLVVESDRTLATYGINAVCTHLGCVVPWNAAENKFLCPC 428
           WLK HGP DRTL QGLKGDPTYLVVE DRTLATY INAVCTHLGCVVPWN AENKF+CPC
Sbjct: 117 WLKAHGPGDRTLAQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNQAENKFICPC 176

Query: 427 HGSQYNNQGKVVRGPAPLSLALAHADVNVDDGKVVFVPWVETDFRTGDAPWWS 269
           HGSQYN+QG+V RGPAPLSLALAH D  +DDGKVVFVPWVETDFRTGDAPWW+
Sbjct: 177 HGSQYNDQGRVARGPAPLSLALAHCD--IDDGKVVFVPWVETDFRTGDAPWWA 227


>ref|XP_003543368.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
           chloroplastic-like [Glycine max]
          Length = 227

 Score =  303 bits (775), Expect = 6e-80
 Identities = 154/233 (66%), Positives = 169/233 (72%), Gaps = 4/233 (1%)
 Frame = -3

Query: 955 MASSTLSPITPSQLCSTKN----IAQAVFVKPMRSHTXXXXXXXXXXXGIRCMATSIPAD 788
           MAS+TLSP TPSQLCS K+     +QA+ VKP++               I C ATSI AD
Sbjct: 1   MASTTLSPTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLR----IACQATSISAD 56

Query: 787 NVPDMEKRKXXXXXXXXXXXXXXXXXXXPYTYFFVPPXXXXXXXGTVAKDALGNDVVAAE 608
            VPDM KR+                   PYTYFFVPP       GTVAKDA+GNDV+A  
Sbjct: 57  RVPDMGKRQLMNLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAEN 116

Query: 607 WLKVHGPNDRTLTQGLKGDPTYLVVESDRTLATYGINAVCTHLGCVVPWNAAENKFLCPC 428
           WLK HGP DRTLTQGLKGDPTYLVVE DRTLAT+ INAVCTHLGCVVPWN AENKF+CPC
Sbjct: 117 WLKAHGPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNQAENKFICPC 176

Query: 427 HGSQYNNQGKVVRGPAPLSLALAHADVNVDDGKVVFVPWVETDFRTGDAPWWS 269
           HGSQYN+QG+VVRGPAPLSLALAH D  +DDGKVVFVPWVETDFRTGDAPWW+
Sbjct: 177 HGSQYNDQGRVVRGPAPLSLALAHCD--IDDGKVVFVPWVETDFRTGDAPWWA 227


>gb|AFK33315.1| unknown [Lotus japonicus]
          Length = 227

 Score =  302 bits (774), Expect = 8e-80
 Identities = 155/233 (66%), Positives = 170/233 (72%), Gaps = 4/233 (1%)
 Frame = -3

Query: 955 MASSTLSPITPSQLCSTKN----IAQAVFVKPMRSHTXXXXXXXXXXXGIRCMATSIPAD 788
           M+S+TLSP+TPSQLCS K+     +QA+ VKP R+              I CMATSIPAD
Sbjct: 1   MSSTTLSPVTPSQLCSGKSGIFCPSQALLVKPARNQMVGKAKGIR----IACMATSIPAD 56

Query: 787 NVPDMEKRKXXXXXXXXXXXXXXXXXXXPYTYFFVPPXXXXXXXGTVAKDALGNDVVAAE 608
            VPDMEKRK                   PY  FF PP       GT+AKDA+GNDVVA +
Sbjct: 57  RVPDMEKRKLLNLLLLGAISLPSAGMLVPYATFFAPPGSGSATGGTIAKDAIGNDVVAEQ 116

Query: 607 WLKVHGPNDRTLTQGLKGDPTYLVVESDRTLATYGINAVCTHLGCVVPWNAAENKFLCPC 428
           WLK HGP DRTLTQGLKGDPTYLVVE DRTLATYGINAVCTHLGCVVP+N AE KF+CPC
Sbjct: 117 WLKAHGPGDRTLTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPFNTAEKKFICPC 176

Query: 427 HGSQYNNQGKVVRGPAPLSLALAHADVNVDDGKVVFVPWVETDFRTGDAPWWS 269
           HGSQYN+QG+VVRGPAPLSLALAH D  V DGKVVFVPWVETDFRTGDAPWW+
Sbjct: 177 HGSQYNDQGRVVRGPAPLSLALAHCD--VVDGKVVFVPWVETDFRTGDAPWWA 227


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